Podarcis raffonei (Aeolian wall lizard): 128408650
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Entry
128408650 CDS
T09310
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03022
Basal transcription factors
praf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128408650 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
128408650 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128408650 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128408650 (GTF2H4)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128408650 (GTF2H4)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128408650 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
128408650
NCBI-ProteinID:
XP_053234599
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All DBs
Position
2:110705843..110721757
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AA seq
460 aa
AA seq
DB search
MESVMKLQRVQLKCKNLHEFLRGLSPGILDRLYNHPATCLAVFRELPGLAKNYVMRMLFL
EQPLPQAAVASWVKKEFTKEQDESSDVLLGLRLWHTQLLPGGLQGIVLNPIFKENLRIAL
LGGGKAWSDDTGQLGPDKHARDVPSLDKYAEERWEVILHFMVGSPSAAVSQDLAQLLIEA
GLMKSSEPGEPPCITSSGFQFLLLDTSSQLWYFMLQYLQSAETRGMDLVEILSFLFQLSF
STLGKDYSVEGMSESLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGISGTAVDTH
YQGFIIVETNYRIYAYTDSELQIALIALFSEMLYRFPNLVVAQVTRESVQQAIANGITAD
QIIHFLRTRAHSVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFELLR
NHAKELGVLVFENPAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggtgatgaaattgcagagggtgcagctgaaatgcaagaaccttcatgaattc
ctgcggggcctcagccctggcatcttagaccggctctacaaccatcctgccacatgccta
gctgtctttcgagagctgccggggttggccaagaactacgtcatgaggatgcttttcctg
gaacagcccctccctcaggccgctgtggcctcatgggtcaagaaggaattcaccaaggag
caagatgaaagctcagatgtcttgctggggctgcggctctggcacacgcagctgctccct
ggtggcctccaaggaattgtcttgaaccccatctttaaggagaacctgcgtattgccttg
ctgggcggaggtaaggcctggtctgatgacactggccagctgggcccagacaagcacgcc
cgggatgtcccgtctcttgacaagtacgccgaggagaggtgggaggtcatcctgcatttc
atggtgggctctccaagtgcagccgtgagccaggacttagctcagctactcattgaagcc
ggactgatgaagagttctgaacctggggagcctccctgcatcacatcttctggcttccag
ttcctgttgctggatacctcatctcagctctggtatttcatgctgcagtatctccagtcg
gctgagacccggggcatggatctggtggagattctttcctttctcttccagctcagcttc
tccactcttggcaaggactattccgtggaagggatgagcgagtctctgctgaatttcctc
cagcaccttcgggaatttggcctcgtctttcagagaaagaggaaatctcgccgttactat
cccacacggctggccatcaacctttcctctggcatttcgggcaccgcagtggacacccat
taccagggcttcatcattgtggagaccaactacaggatctatgcctacacagattccgaa
ctacagattgcgctcattgccctcttttccgagatgctctaccgcttccccaacttggtg
gtggctcaggtcacccgggagagcgtgcagcaagccatcgccaatggcatcacggcagac
cagatcattcatttcctacgtaccagagctcactctgtgatgctgaaacagaccccggtg
ctgcctcccaccatcacagatcagatccggctgtgggagctggaacgagacagactccgc
ttctctgagggtgtcctctacaaccagttcctgtcccaggtcgactttgagctgctgcgc
aaccacgcaaaggagctgggggtccttgtcttcgagaacccggccaaacgtctcatggtg
gtgacacccgccggccactcggacgtcaagcgcttctggaagcggcagaaacacagttcc
tga
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