Podarcis raffonei (Aeolian wall lizard): 128408890
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Entry
128408890 CDS
T09310
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41-like
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128408890
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128408890
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128408890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_6
Bacillus_HBL
TRAF3_RING
zf-RING_5
PigL_N
DUF1664
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
128408890
NCBI-ProteinID:
XP_053234892
LinkDB
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Position
2:108619097..108630350
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AA seq
649 aa
AA seq
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MAAAGPASSGSRAAPNPVATLHEEAVCAICLDYFIDPVSIGCGHNFCRVCITQLWGSGSE
EGDDAGASGSDGGYGPGSDAGGDDGGVDDLGPEEDADPDEDDLEDNEYLDDGGDMEEEEE
VVSREEEFDDEEDDVWDDEDERAYWAQRPGSDDMWDDDMGNDLLFDSYDDDEVMDEEEEP
EDEYTVPPTPPTPQMRPAFSCPQCRKVFPRRSFRPNLQLANMVQIIRQMHPQPFNSVAVS
TEAVELAAAGDSSGSPSVLAAGRALSAERTLCEKHQEPLKLFCEADEEPICVVCRESRAH
KHHSVMPLEEVVQEYKAKLQGHLDPLKKKLETVMKQKSVEQEKIADLRNKMKLDMKDFEA
DFERLHQFLIGEQALMLHQLEDRYEVLLASQSNNVSHLEEQAAALSRLIAEAEDKSKQDG
LQMIKDFKGTLVRCENITFQDPEMVPVDAGKKFRNYFLIDVLMKKMGKIFCQVPQAELIL
DPETAHPRLTVSSDCLGVRLGERWRDLPDSPKRFDSDYCVLALQGFTYGRHYWEVEVGGR
RGWAVGVARESARRKEKSAGGGSHQKREIWCVGTNGKKYQALTTTEQTSLSPSEKLRRFC
VFLDYERGQLSFYNAESMGHIHTFNASFRERIFPFFRILSKGTRIKICN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggggcccgcaagtagcggctcccgggccgcccccaacccggtggcgacc
ctccacgaggaggccgtgtgcgccatctgcctggactacttcatcgacccggtgtccatc
ggctgcggccacaacttctgccgcgtgtgcatcactcagctgtggggctcgggctcggag
gaaggggacgacgcgggcgcctccggctcggacggagggtacgggcccggctccgacgcg
ggcggggatgacggaggggtcgacgacctggggccggaggaggacgccgaccccgacgaa
gacgacctggaggacaacgagtacttggatgatggcggggacatggaagaggaggaggag
gtcgtgtctcgggaggaggagttcgacgacgaagaggacgacgtgtgggatgatgaagac
gagagagcgtactgggcccagcgccccgggtccgacgacatgtgggacgatgacatgggg
aacgacttgctgttcgacagctacgacgacgacgaggttatggacgaggaagaggagccg
gaggatgagtatactgtgccccccaccccgccgaccccccagatgcgcccggctttcagc
tgcccccagtgccgcaaggttttccctcgccgcagcttccgccccaacctccagctggcc
aatatggtgcagatcatccgccagatgcacccgcagccgttcaactctgtggcggtgtcc
acggaggccgtggaactggcggcggcaggggattcatccggatcgccgtccgtgttagcg
gcgggacgagctctgagtgctgagcgaaccctgtgcgagaagcaccaggagcccctcaag
cttttctgtgaggcagatgaagagcccatctgtgttgtgtgcagagaatcgcgggcccat
aagcaccacagcgtcatgccgctggaagaggttgtgcaagaatacaaggccaaacttcaa
ggccacttggatccactaaagaagaaactagagactgttatgaagcagaagtcggtcgaa
caggagaaaatagcagacctcaggaacaagatgaagctcgatatgaaagactttgaggcg
gactttgagcggctgcaccagttcctcattggggagcaggcactgatgctgcaccagctg
gaggaccgctacgaggtgcttcttgccagccagagtaacaatgtctcccaccttgaggag
caagctgctgccctcagccgcctcattgcagaagcggaggacaagagcaagcaggatggc
ttgcagatgatcaaggacttcaaaggcactttagtcaggtgtgagaacattacgttccag
gatccagagatggtgccagtggatgcaggaaagaaatttcgaaactacttccttatagac
gtcttaatgaagaagatggggaagattttctgccaagtccctcaagctgaattgattctg
gaccccgagacagcccacccgcgcctcaccgtttcctcggactgcctcggcgtccggctc
ggagagcgctggcgggacctgcccgacagccccaagcgctttgactccgactactgcgtt
ctggccttgcagggtttcacctacggccgccactactgggaagtggaggtggggggccgg
cgggggtgggctgtgggggtggcccgcgaatcggcccggcgcaaagagaagtccgccggg
ggcggctcccaccagaaacgcgagatctggtgcgtggggaccaacggcaagaagtaccag
gctctgacgaccactgagcagacctccctttccccatccgagaagctccgccgcttctgc
gtcttcctggactatgaacggggccagctgagcttctacaatgccgagagcatgggccat
atccataccttcaacgcctcgttccgcgagcgcatcttccccttcttccgcattctttct
aaggggacccgcatcaaaatctgcaattga
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