Podarcis raffonei (Aeolian wall lizard): 128409231
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Entry
128409231 CDS
T09310
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128409231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128409231
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128409231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
128409231
NCBI-ProteinID:
XP_053235509
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Position
2:complement(119355346..119373037)
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AA seq
581 aa
AA seq
DB search
MSQFNFGTPSTPGGGFSFGTPKTAASTAPAGFSFSSATTGGGFSFGTAAQNPASTQPAGL
FSFAPPATSAQTSGFSFGTPATSAPAAAGNVFTLGGNAPKLNLSSTNTTQSAGITGALGL
GSGGLGTSTPSSAPASQPVAPSGFVFGSNTATQPATTGGFSFGGVGATQAAAPSFSLGSI
GNTTQQAAPASTGLAFGVPASAAGPTTTTVSTAQPAVAFGLGAQTTAPVSGFGLLTSTPA
TSASTGTLGQGPALSFGAKLGAGTAATSTAPSTTAVNSILGMSGPTLFASIASSSAPASS
ATGLSLGVTSTGTAPAGTLGFGTKAPGTTATAPTATATAVGGAPAATSIASTPSTGFMLN
LKPLSTTATVASTSTAATTTVTAPPSMTYAQLESLVNKWSLELEDQEKHFLQQATQVNAW
DRKLIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLVPLEESVKEQSGTV
YLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQICKILNAH
MDSLQWIDQNSALLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcaactttggcacacctagcactcctgggggaggcttcagctttgggact
ccgaaaaccgcagccagcacagcccccgccgggttctccttctcttcagccaccacaggg
ggaggcttcagttttgggacagctgctcaaaacccagcaagcacccagcctgcaggcctg
ttctctttcgctcccccagcgacatcggcacagacctctggattcagcttcggcacacct
gccacgtcggcaccagctgctgctggaaatgtgttcacactggggggaaatgcccccaag
ctgaacttgagcagcaccaacacaacacaatcggctggcattacaggggcgcttgggctc
ggcagcggcgggctgggcacatccacacccagtagtgcccctgccagccagccggtggct
ccttccggctttgtctttggctccaacaccgctacccagcctgccacaaccggaggcttc
agctttggaggcgtgggagcaacgcaggctgcggcccccagcttcagccttggctccata
gggaatacgacgcagcaagcagcacccgcctccactggcttggcgttcggagttcctgca
tccgcggccggccctactacaaccacggtatccacagcgcagccagctgtggcgtttggc
cttggggcgcagacaacagctccagtttcaggctttgggctgctgacgtcaacacctgcc
acctctgcctccacaggaacgctcggtcaagggccagccttgtcctttggagcgaaactt
ggagcaggtacagcggcaacttccacggcgccttctaccacagctgtgaactccatcctc
gggatgtccgggccgacgttgtttgcgtccattgcaagctcttccgcgccagcctcgtct
gctactggcctctcacttggtgtcacctcaacggggacggcgcctgctgggactttaggg
tttggcacaaaagcccctgggacgacagcaacagcacccacagccacagcgactgcagtg
ggaggagcccctgcagcaaccagtatcgcctccaccccaagtacgggattcatgctgaac
ctgaagcctctgtccaccactgctacagtggcctccacgtccactgcggccaccacaaca
gtcacggctcccccgtcgatgacctacgcccagctggagagcctggttaacaagtggagc
ttggagctggaggaccaggagaagcacttcctccagcaggccacccaagtcaatgcctgg
gaccggaaactgatcgaaaacggggagaagatcacgtctctgcaccgagaagtggaaaaa
gtgaaactggatcagaaaaggttggaccaagaactagatttcattttgtcccagcaaaag
gagctggaggacttgctggtgcccctggaagagtccgtaaaggaacagagtgggaccgtc
tacttacaacatgcagatgaggaacgggagaagacgtacaaactggcagagaacattgat
gcccagctgaagcgcatggcccaagatctgaaagatattattgagcacctgaacacctct
ggaggccctgctgacaccagtgacccgcttcagcagatctgcaagattctgaatgcgcac
atggactccctccagtggattgatcagaattcagccctgctgcaaaggaaagtggaggaa
gtgaccaaggtttgtgaaagccgccgcaaggaacaggagcgcagcttccggattacgttt
gactga
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