Podarcis raffonei (Aeolian wall lizard): 128409821 Help Entry 128409821         CDS       T09310                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism praf  Podarcis raffonei (Aeolian wall lizard) Pathway praf04510   Focal adhesion praf04512   ECM-receptor interaction praf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:praf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128409821 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128409821 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128409821 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:praf04147]     128409821 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:praf00536]     128409821 (COL4A1) Exosome [BR:praf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    128409821 (COL4A1) Glycosaminoglycan binding proteins [BR:praf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128409821 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  128409821 NCBI-ProteinID:  XP_053236221 LinkDB All DBs Position 3:complement(418049..586940) Genome browser AA seq 1683 aa AA seqDB search MGRPARDPPLALLLAALLLPLLLLERRWAAEAAAAACSGCGKCDCSGVKGQKGERGLQGL QGLVGFPGIQGPEGPPGPPGMKGDIGEPGLPGTKGTRGAPGPAGYPGNPGLPGIPGGDGP PGPSGIPGCNGTKGERGPLGPQGLPGLPGNLGPPGPPGIKGDPGEVIGLIPDGVLKGEKG FPGHPGLPGTPGSPGIAGPVGPPGPSGKPGSPGPPGPPGEKGHMGLSFQGPKGDKGERGA MGPPGPQGTAPQQQEKGTVVIRGETGAPGEKGDPGSPGSPGLSEKGQKGEPGKPGPRGRP GKDGENGEKGRTGETGPPGFPGLPGISGPKGDKGAAGPSGPPGIVIGIGDQEVIGEKGDS GPPGIPGQKGEPGQKGFPGLPGAPGLPGQPSPGIIGAPGFPGERGEKGDRGSPGSSLPGP KGRDGPPGLPGVPGLPGPPFATDGILECQPGQPGDPGPPGPRGQHGFLGERGEKGVKGDG CFTCDVPSLAGEPGPQGFPGEPGVAGPKGAKGDRGLSGFEGLPGMTGPPGVPGLAGSPGA KGEPGDVFFDSDLKGDKGDPGFPGPPGVPGREGRPGRDGLPGAPGLKGASGTIGLKGERG LPGISGFPGPRGERGFPGSPGVGPSGPPGDKGDKGLSGIPGTPGFPGPKGEAGRVISLPG SPGADGIPGPPGIQGIQGDKGDPGIPGTPGLPGEKGQTGPPGIGFPGSPGLPGFPGQSGP PGVTGEKGEPGSPGLPGAQGSHGQKGEPGLGLPGPKGFPGPQGRDGLPGSKGDRGLPGIP GEKGFPGVTGQPGSHGDPGPSGIPGLQGSPGLPGIGPPGPPGVPGQSGPPGPIGPPGSKG ERGYPGVPGLDMPGSKGDKGSQGSPGLPGLQGLPGLPGPQGQEGRPGAPGIKGEMGVMGT PGSQGPPGPSGSSGAPGEKGDRGFPGAVGLRGDPGSKGEKGEAGLRGEPGKMDHVDMESM KGQKGDKGSKGQLGPLGEKGTAGDPGTPGMPGKDGEPGLPGQTGPKGDQGPPGYQGEPGA PGQKGSMGEMGLPGPSGEKGVQGLPGEAGKHGLPGAKGVKGEKGQAGLPGIGFPGAPGEK GDPGKTGIPGVPGEKGERGVPGIPGIPGSPGAKGLPGLQGSPGIPGIPGEKGGKGLPGLD GFPGLKGEKGDLGPEGPPGAPGERGQPGHDGIPGSPGAKGDPGIPGRGLPGLPGAKGERG AKGDVGSPGSPGSPGIPGTKGEAGFPGPQGPSGQPGVPGLPGKIGEGPKGDRGPQGRPGL QGIPGPQGSPGAPGLQGVKGEKGNPGWPGTPGRPGLKGDQGQQGIPGNAGFPGAAGPKGD MGPSGIPGPQGPKGSSGVPGLKGEQGDQGFPGAKGFPGPPGPPGPFLLLKGEPGEPGPVG PVGPKGFPGPPGPKGQQGVTGPVGVTGLPGTPGFDGMPGQKGETGPAGPPGPRGFPGPPG PEGMPGSMGPPGSPSVAHGFLVTRHSQSTEEPTCPSGTRLMFHGYSLLYVQGNERAHGQD LGTAGSCLRKFSTMPFLFCNINSVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFIS RCAVCEASAMVMAVHSQTIQIPPCPEGWRSLWIGYSFVMHTSAGAEGSGQALASPGSCLE EFRSAPFIECHGKGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLHSNVSRCQVCM RRT NT seq 5052 nt NT seq  +upstreamnt  +downstreamnt atgggccgccccgcgcgggatccgccgctcgcgctcctgctggctgcgctgctgctgccg ctgctcctcctcgagcggcgctgggcggccgaagcggctgcggcggcttgttctggctgt ggaaaatgtgactgtagtggagtaaaagggcaaaaaggtgaaagaggtttgcaaggttta caaggtttggttggatttcctggaatacaaggacctgaaggtccccccggccccccagga atgaagggtgatattggagaaccgggattaccaggaacaaaaggaacaagaggtgcacca ggtccagctggctacccaggaaatcctggccttcctggcatccctggaggagacggcccc ccagggccttctggtatcccaggatgcaatggaacaaagggtgaaagaggtcctcttggt ccccaaggtttacctggattacccggaaatctagggcctccaggacctccaggaataaag ggagacccaggagaagttattggactgatacctgacggtgtactaaaaggtgaaaaaggc tttcctggtcaccctggattaccgggaacacctggttcaccaggtattgcgggccctgtt ggaccacctggaccttctggaaaacctggttctccagggccaccaggccccccaggtgag aagggtcatatgggtttaagcttccaaggaccaaagggtgataagggtgaacggggtgcc atgggccctccaggtccccagggaactgctcctcaacagcaagagaaaggaaccgtagta atacgtggagagactggtgctcctggtgaaaagggtgaccctggatctccaggatcacca ggattaagtgagaaagggcagaaaggtgaacctggaaaacctggtccacggggaagacct ggaaaggatggagaaaatggagagaagggaagaactggagaaactggccccccgggattt ccaggactgcccggaataagtggtcctaaaggagataagggtgcagcaggtccttcagga cctccaggaatagttatagggattggagatcaagaagtaataggtgagaaaggcgactca ggtcctccaggaattcctggacaaaaaggtgaaccaggtcaaaaaggttttccaggtcta ccaggggcaccaggtctaccagggcaacccagtcctgggataataggggcacctggtttt ccgggcgagagaggagaaaagggtgaccgggggtctcctggatcttcattgcctgggcca aaaggaagagatggacctccaggacttcccggtgtaccagggcttccaggcccacctttt gcaacagatggaattctggagtgccaacctgggcagcctggtgatccaggccctcctggg cctcgtggccagcatggcttcttgggagaaaggggagaaaaaggggtaaaaggtgatggc tgttttacctgtgatgtacccagcctagctggtgagccaggcccccaggggtttccagga gaaccaggtgttgcaggaccaaagggtgctaaaggtgacaggggcctttctggatttgag ggtcttccaggaatgacaggacctccaggtgtacctggactggcaggaagcccaggagca aaaggggaacctggagatgttttttttgactctgatttaaaaggtgataaaggagatcca ggattccctggacctccaggtgttcctggaagagaaggaagaccagggcgggatggcctg ccaggtgccccaggtcttaaaggtgcatcgggaacaattgggttaaaaggagaacgtggc ctcccaggaataagtggttttccaggaccccgtggagagagaggttttcctggttcccca ggggtcgggccctctgggccacctggtgataaaggggacaaaggtctttcagggattccc ggcacaccaggatttccaggacccaaaggtgaagctggacgcgtcatttctctgcctggt tctccaggagcagatggtattcctggcccccctggaattcagggcatccaaggtgacaaa ggagatccagggatcccaggaacgcctggcctgcctggtgaaaaaggccagacaggtcca ccaggaatagggtttcctggctcgccagggctcccaggttttcctggtcagtcaggccca ccaggtgtaactggagaaaagggagaacccggttctccagggttaccaggtgcacaaggg tcacacggacaaaagggtgaacctggattaggtctcccaggccctaaaggttttcctggt ccacaaggacgagatggccttcctggatcaaaaggtgatcgaggcttacctggcatacca ggagaaaaaggatttccaggtgtgactggccagccaggatcccatggtgaccctggtcct tctggaataccaggtctacagggctcccccggtttaccaggaataggccctcctggccct cctggggttccaggacaatctggtcctccgggaccaataggacctccaggaagcaaaggg gaaagaggctacccgggtgttcctgggctagacatgccagggtccaaaggagataaaggt agccaaggatctccggggctgccaggattacaagggctgccaggcctgcctggcccacaa ggacaagaagggcgccctggtgccccaggaatcaaaggagaaatgggagttatgggcaca cctggaagccagggtcctcctggtccttcaggatcttctggagctccaggtgaaaaaggt gacaggggttttcctggagctgtggggctcagaggtgatcctggctcaaagggtgaaaag ggtgaagctggtctacgaggagaaccaggaaaaatggatcatgtagacatggaaagcatg aaaggccaaaaaggagataaaggaagtaaaggacaactgggacctttaggagagaaggga actgcaggggatcctggcacaccaggaatgccagggaaggatggggagcctggtctacct ggacaaacagggccaaaaggggaccaaggccctccaggataccagggtgaaccaggagct cctggacagaaggggtccatgggagaaatgggtctcccaggaccatcaggagaaaagggt gtgcaaggccttcctggtgaggcagggaaacatgggttacctggagcaaaaggtgtgaaa ggtgaaaaagggcaggctgggcttccaggaattggcttccccggggctcctggtgagaag ggagacccaggaaagacaggtattcctggcgtgcctggagagaaaggtgaaagaggtgtt ccaggaattccaggcatccctggctccccaggtgccaaagggctaccaggtcttcagggt tctccaggtattccaggaatcccaggtgaaaaaggtggaaagggattaccaggcttagat ggttttcctggcttaaaaggagaaaaaggtgaccttgggcctgaaggtcccccaggagct cctggagaaaggggccagccaggacacgatggaatcccaggctcacctggtgcaaagggt gacccaggtattcctggtagaggacttcctggacttccaggtgcaaagggagaacgaggt gcaaaaggagatgtgggctcccctggctccccaggaagcccagggattcctggtacaaag ggagaagcaggatttcctggccctcagggtccttcaggccaaccaggtgttcctggattg ccaggcaaaattggagagggacctaagggtgaccggggacctcaaggccgacctgggctt caaggaattcctgggccacaaggctctccaggtgctccaggattacaaggagtcaaagga gaaaaaggaaacccaggatggccaggaacaccaggaagacctggactcaaaggtgaccag gggcagcaaggaatccctggcaatgctggctttccaggagctgctggcccaaaaggtgac atggggccttctggaattccaggccctcaaggtccaaaaggttcttcaggtgttcctgga ctcaaaggagaacaaggtgaccaagggtttcccggagctaaaggttttccaggcccacca ggtcctccaggccccttcctactcttgaaaggtgaaccaggtgaacctggtcctgtaggc ccagtaggccctaagggatttcctggtcctccaggcccaaaaggccaacaaggtgtaacg ggacctgtgggtgtgactggtctcccaggcactccgggatttgatggaatgccaggtcag aaaggagaaactggtcctgctggtcctccaggtcctagaggctttcctggcccacctggt cctgaaggcatgccagggtcaatgggtccaccagggagtccctctgtagctcacggtttc cttgtgaccaggcacagccaaagcacagaggagccaacatgcccatctggaacaagactg atgttccacgggtattctttgctttatgtacaaggaaacgaacgggcccatggtcaggac ttgggcacagctgggagctgtctacgtaaattcagcacaatgcctttcctgttctgcaac attaacagtgtatgcaattttgcctcaaggaatgattattcttactggttatctacccct gagccaatgccaatgagtatggctcctattacaggagacaacatcaggcctttcatcagt cggtgtgctgtatgtgaagcttctgcaatggtgatggcagttcacagtcaaacaattcaa attccaccatgtccagaaggatggagatcactgtggataggctactcctttgtgatgcac accagtgctggtgcagaaggctcagggcaagctctggcatctccaggttcctgtctggaa gagttccgcagtgctcccttcatagaatgccacggcaagggcacctgcaattattatgca aatgcttacagcttctggcttgccactattgagagaaatgaaatgttcaagaaacctact ccttccacactaaaagcaggagatctacactcaaatgttagccgttgccaagtatgtatg agaagaacatga

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