Podarcis raffonei (Aeolian wall lizard): 128410010
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Entry
128410010 CDS
T09310
Symbol
JAG1
Name
(RefSeq) protein jagged-1 isoform X1
KO
K06052
jagged-1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04330
Notch signaling pathway
praf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128410010 (JAG1)
04371 Apelin signaling pathway
128410010 (JAG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
praf04090
]
128410010 (JAG1)
CD molecules [BR:
praf04090
]
Proteins
128410010 (JAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
DSL
EGF_2
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
IN_DBD_C
DUF6479
Motif
Other DBs
NCBI-GeneID:
128410010
NCBI-ProteinID:
XP_053236603
LinkDB
All DBs
Position
3:15449772..15517904
Genome browser
AA seq
1219 aa
AA seq
DB search
MLGSKGPQLTDFSLRLLLALLCLRVKVTLTSGQFEFEIISMQNVNGELQNGNCCDGTRNP
ADKKCTRDECDTYFKVCLKEYQSRVSAGGPCSFGSGSTPVVGGNTFSLKYNRNNERNRIV
LPFSFAWPRSYTLLVEAWDYSNDSVNADSIIEKASHSGMINPSRQWQILKQNAGVAHFEY
QIRVTCDEHYYGFGCNKFCRPRDDFFGHYTCDQNGNKTCLEGWMGLDCDKAICRQGCSPK
HGSCKIPGECRCQYGWQGQYCDKCIPHPGCVHGTCNEPWQCLCETNWGGQFCNKDLNYCG
THPPCLNGGTCSNTGPDKYQCSCPEGYSGQNCEIAEHACLSDPCHNGGSCLETSTGFECV
CAPGWGAPTCTLNIDDCSPNPCGHGGTCQDLVDGFKCICPPQWTGKTCQIDANECEGKPC
LNANSCRNLIGNYYCNCVPGWTGQNCDINIDDCIGQCQNGGTCRDLVNGYQCSCPLGYAG
DHCERDIDECASNPCLNGGHCQDEINGFQCLCPAGFSGNVCQLDIDYCEPNPCQNGAQCF
NYENDYFCSNCPEDYEGKNCSHLKDHCRSTPCEVIDSCTVAVASNSTPEGVRYISSNVCG
PHGKCKSQAGGKFTCECSKGFTGTYCHENINDCESNPCKNGGTCIDGINSYKCICSDGWE
GTFCEANINDCSKNPCHNGGTCRDLVNDFFCECKNGWKGKTCHSRDSQCDEATCNNGGTC
YDEGDAFKCMCPAGWEGATCNIARNSSCLPNPCHNGGTCVVSGDSFTCVCKEGWEGPTCT
QNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEIN
GYRCICPAGRIGPRCQEVSGRPCIGSGHIIPDGTKWDDECNSCQCVNGKVTCSKVWCGPK
PCLISAKGHSECPTGHTCHPVKEDHCFVGPCDNIGECWPSNQQPVKSTCNSDAYYQDNCA
NITFTFNKKMMTPGLTTEHICNELRNLSILKNVSVEYSIYITCEPSHLAHDEIHVAISAE
DIQEEENPIKEITDKIIDLVSKRDGNSTLIAAVAEVRVQRRPIKSKTDFLVPLLSSVLTV
AWICCLVTAFYWCIRKRRKQSAHTHTPSDDNTTNNVREQLNQIKNPIEKHGANAIPIKDY
ENKNSKIAKIRTHNSEVEEDDMDKHQQKSRFAKQATYTLVDRDEKPPNGTPAKHPNWTNK
QDNRDLESAQSLNRMEYIV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcttggctcaaagggaccgcagctcacggacttctccttacggcttctccttgccctg
ttatgcttgcgagtcaaggtgaccctaacatcaggccagttcgagtttgagatcatatcc
atgcaaaatgtcaatggcgaattgcagaatgggaattgctgtgacgggacccgaaaccca
gccgataagaaatgcaccagagatgaatgtgatacttatttcaaagtttgcctgaaggag
tatcagtcgagggtttccgctgggggcccttgcagctttgggtccggatctactccagtc
gtcggtgggaataccttcagtttgaaatacaatcggaataacgaaaggaaccggattgtc
ctccctttcagcttcgcctggccgagatcctacacgttgctcgttgaagcctgggattac
agtaacgacagtgttaatgccgacagcatcatcgaaaaggcatctcactctgggatgatc
aacccgagccgccagtggcagatattgaagcagaacgcaggtgtggctcacttcgaatac
cagatccgggtcacttgcgacgagcactactacggctttggctgcaacaagttttgccgg
ccgagagatgacttttttgggcactacacctgcgatcagaatggcaacaaaacgtgcttg
gaaggctggatgggtctggactgtgacaaagccatctgtcgtcagggttgcagccccaaa
cacggttcttgcaaaattcccggagagtgcaggtgtcagtacggttggcaaggtcagtac
tgtgacaagtgcattcctcacccgggctgtgtccatggaacttgcaacgaaccgtggcaa
tgcctctgcgaaaccaactggggtggccagttctgcaataaagatctcaactattgcggg
actcacccgccttgcttgaacgggggaacgtgcagcaacaccggaccagacaagtaccag
tgctcctgcccagagggttactcgggacagaactgtgaaatcgcggaacatgcctgcctt
tcggatccttgccacaatggaggaagctgcctcgaaacctcgacgggatttgagtgtgtc
tgtgctccaggctggggggcaccaacctgcacactcaatattgacgactgctctccaaac
ccctgcggccatggagggacctgccaggatctggtcgatgggtttaaatgtatttgccca
cctcagtggactggcaaaacgtgtcagattgatgccaacgaatgcgagggcaaaccttgt
ctgaatgccaattcctgcaggaacttgattggcaactactattgcaactgtgtccctggc
tggactggccagaattgtgatataaatattgacgactgcattggacaatgtcagaatgga
ggaacttgcagggacttggttaatggttatcaatgctcctgcccacttggctacgcaggg
gatcactgtgagagagacatcgatgaatgtgcaagcaacccttgtttgaatgggggccac
tgccaagatgaaatcaatggattccagtgtctctgccctgccggattctctggaaatgtc
tgtcagttggacatagattactgcgaacccaacccttgccagaacggggcacagtgcttc
aattacgaaaacgactacttctgcagcaactgccccgaagattatgagggaaagaactgc
tcgcacctcaaggatcactgccgctcgactccttgcgaagtcattgacagctgcacggtt
gccgtggcgtccaacagcaccccggaaggcgtccgctacatctcttccaatgtctgcggt
ccccacgggaagtgcaagagtcaggcgggaggcaagttcacttgcgaatgcagcaaaggc
ttcaccggcacctactgccatgaaaacatcaacgattgcgagagcaacccgtgtaagaat
ggcggcacgtgcattgatggcatcaattcctacaaatgcatttgtagcgatggatgggaa
ggcaccttctgcgaagccaatatcaacgactgcagcaaaaacccctgccacaatggagga
acttgccgagacttggtgaacgatttcttctgcgagtgcaaaaatggctggaaagggaaa
acctgccactcgcgcgacagtcagtgtgacgaagccacatgcaacaatggagggacctgc
tatgacgagggagatgccttcaagtgcatgtgtcccgcaggatgggaaggagccacctgc
aatatcgccaggaacagcagctgcctcccgaacccttgtcacaatggcgggacttgtgtc
gtcagtggagattccttcacgtgtgtgtgcaaagagggctgggagggaccgacttgcact
cagaataccaacgattgcagtcctcatccttgctataatagtgggacgtgtgtggatgga
gacaattggtaccgttgcgaatgcgctccaggctttgcaggtcccgactgcaggataaat
atcaatgaatgccagtcctcgccctgtgcttttggagcaacatgtgtcgatgaaatcaac
gggtaccgttgtatctgtcctgccggccgcattggccccagatgccaagaagtttcagga
aggccttgcatcggcagtgggcacattattccagatggaactaaatgggacgacgagtgt
aatagctgtcagtgtgtgaacggaaaagtcacgtgctctaaggtctggtgtggtccgaag
ccttgcttgataagcgccaaaggtcacagcgagtgtcccacaggccatacctgccaccct
gtcaaagaggaccactgcttcgtaggtccctgcgacaacataggcgagtgctggccttcc
aatcagcagcccgtgaaaagcacatgcaactccgatgcttactatcaggacaactgtgcc
aacatcactttcaccttcaataaaaagatgatgactccaggccttacaactgagcatatc
tgtaacgagctgaggaatctaagtatcttgaagaatgtgtccgtcgaatactccatctac
atcacgtgtgaaccgtcgcacttggcacacgatgaaatccatgttgcaatttctgccgaa
gatatacaggaggaagagaacccgataaaagaaataacagacaaaattattgatctggtg
agcaagcgtgatgggaatagtacgcttattgcagcggttgcagaagtccgggtacagagg
cgaccaattaaaagcaaaacagatttcttggtcccgttgctgagctccgttctgaccgtg
gcttggatctgctgtctggtcacggccttttactggtgcatccgtaagcgccggaagcag
agcgcgcacacgcacacgccgtcggacgacaacaccaccaacaacgtccgggagcagctg
aaccagatcaagaaccccattgagaagcacggcgccaacgccatccccatcaaggactac
gagaacaagaactccaagattgccaaaataaggacacacaactcggaggtggaagaagac
gacatggacaagcaccagcagaagagccgctttgccaagcaggcgacctacacgctggtc
gacagagacgaaaagccccccaacggcacgccggcaaagcacccgaactggacaaacaag
caggacaaccgggacttagaaagcgcacaaagcttgaaccgcatggagtacattgtatag
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