Podarcis raffonei (Aeolian wall lizard): 128410137
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Entry
128410137 CDS
T09310
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128410137 (GEN1)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128410137 (GEN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
128410137
NCBI-ProteinID:
XP_053236898
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Position
3:complement(29431171..29461140)
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AA seq
934 aa
AA seq
DB search
MMGVTSLWQILEPVKQHVPLSSLKGKTLAVDLSLWVCEAQTVKKMVGIVRKPHLRNLYFR
VSLLTLMGIHLVFVMEGESPELKADTMRKRTEARFGPSSKPRRARTGRSRFKSLLKECLE
MLECLGVPWVQAAGEAEAMCAYLNLNGYVDACITNDGDAFLYGAQTVYRNFTMNIKDPHI
DCYSILAIEKTLGCNRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIKTVRGESLLQRFA
YWKDHFQDDDIPALAVNKVIHCAVCRHPGAYKDHESAGCRLCGSSACCEPHDAEFCCPCD
WHSSEQDRRVSAVENGIKKKAKACKGFPFPEVIQEYLISKDKPMKLNGCRRPNLLSFQKF
AFEKMDWSKHYACEKLCILLTYYDMNRRKSGHFDPQQLQARRIIKNRTKNGIPCFEIEWQ
KPDHYATADDQPAEPFLITTEEASLFEAAYPEVVARYHMEKLEICKERNKGKKKKPKERE
RLAGDSEITDLLSRLNMRSDEETFPGKDPKPPFTTVSGFQTVPEKGSKIQGLPVTTHFPT
AVTQSQNPPSTLVATTLQNTEYNCIPNGSPSSQPENLHASSQIAHLQLSDIDWEGTSFSI
SPKRVNIACSESESDASNNFPSQHSSLHCKTAEIIPPSLNSVRYDPNLPGSEECSVSKID
LHKGQNDLSSQERAILKPSALEASPSLSDMSLLNSLQMVEQINVTSSPEGKAPSLSAQLN
DSAQEVESILPGKCLRGLGLPNLLKNYENPARASDNLTSPGTSVSLGARTLKPTCLGNKS
PRLSCKSTEVLDSCQVRGKPLPATHKSSLKKSVCQKIYSSEDSDDENVKGRKKAHRSPKW
RRKGRVVQLKDKCRDKRSSHELVAEVVPGENSLKGPAINLPVEELPIAHIHNSLTLSESK
LCQSSPPLQASEAAAWADSPLPLAERLKLRLQSS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagtgaccagcttgtggcagatcctggaacctgtaaaacaacacgtccccctc
agcagccttaaaggaaagaccctggctgttgatttaagtctctgggtgtgtgaagcacaa
acagttaaaaagatggttgggatagtcagaaaacctcaccttaggaatctttattttcga
gtctctctgttaacgctaatgggaatccatttggtgtttgtcatggagggagagtcccca
gagctgaaagcagacacaatgcgaaagaggacagaagctcgctttggcccatccagcaaa
cccaggagggcaagaacagggagatctcgttttaaatctctactgaaagagtgccttgaa
atgttggagtgcttaggggtcccgtgggttcaggcagccggtgaagcagaagccatgtgt
gcttatctgaacttgaacggctacgtggatgcctgcatcaccaatgatggtgatgccttc
ctctacggtgctcagacagtttaccggaattttaccatgaacataaaggacccgcacatt
gactgctattcaatattagctattgagaagacactgggctgcaacagagaatcactgatt
ggattagcagttctacttggttgtgattaccttcctaagggagttcctggagttggaaaa
gaacaagctttaaagttgattaagactgtgaggggagagagcttactgcaaagatttgcg
tactggaaagaccacttccaagatgatgacatcccagccctggcagtaaacaaagtgatt
cattgcgccgtgtgtcgtcatccaggagcttataaagatcatgagagcgccgggtgccgt
ctctgcggcagctcagcatgctgtgaaccccacgatgcggaattctgctgcccttgtgac
tggcactcctccgagcaagaccggcgagtcagcgcagtggagaatggcattaaaaagaaa
gctaaagcatgcaaaggatttccatttcctgaggttatccaagagtacctaatcagcaaa
gataaaccgatgaagttaaatgggtgccggaggccaaatttattgtcctttcagaaattt
gcttttgagaaaatggactggtccaagcattacgcttgtgagaaattgtgcatcctcctc
acatactatgacatgaacagaaggaagtctggccattttgacccacagcaactgcaggca
cgacggataatcaagaaccggactaaaaatggcattccttgctttgaaatagagtggcaa
aagccagatcattacgctacagcagacgatcagcctgcagaaccctttttaataacaaca
gaagaggcgtcactatttgaggctgcgtatccagaagtggttgcccggtaccatatggag
aagttggaaatatgcaaggaaaggaacaaaggtaagaagaagaaacctaaagagagagaa
cgcttagctggggacagtgaaattacagatcttctttctcggctgaacatgcgatctgat
gaggaaacctttcccggcaaagatcctaagcccccatttacaactgtttctggttttcaa
acagtcccagaaaagggctctaaaattcagggcctacctgtcactacacattttcctact
gcagtcacgcaaagtcaaaacccaccatctaccttggttgcgactactttgcaaaataca
gagtataattgcattcctaacggttctccgagctcgcaacctgaaaacttgcatgcatct
tcccaaattgcccatctgcagttgagtgacattgactgggaaggaacatccttcagcatt
tctccaaagcgggttaatattgcttgttcggaatctgagtcagatgcgagtaataatttt
ccaagtcaacactcttcactgcactgcaaaacagctgaaatcattcccccgtctttgaat
tctgtgcgatatgatccaaatctgccagggagtgaggagtgctctgtctccaaaattgac
cttcataaaggtcaaaatgatttatcttcacaagagcgggcaattctgaagccttctgct
ttggaagcttctcccagcctttcagatatgtctctgttaaactctttgcaaatggtagaa
caaatcaatgttacatctagccctgagggaaaagctccatctctttcagctcagctaaat
gacagtgctcaggaagttgaaagtatattaccaggaaaatgtctgcggggacttggcttg
ccaaacttgctcaaaaactatgaaaatccagcccgggcgtcagataacctcaccagtcca
ggaacttcagtgtctctgggcgccagaacactaaaaccaacttgcttgggaaacaagtca
ccaagattgtcttgcaagtcaacggaagtcctagatagctgtcaggtgaggggaaagccc
ctgccggccactcataaaagctcgctgaagaagagtgtgtgccaaaagatttactccagt
gaagacagtgatgatgaaaatgtgaaaggtagaaagaaggctcacagaagccctaagtgg
cgaaggaagggtcgcgttgttcagctgaaggacaagtgtagggacaaaaggagcagccat
gaattggtggctgaagttgtgccaggagagaactctcttaaagggcctgccattaattta
ccagtggaggagcttcctattgcacacattcacaattctctgacactctcagaatctaag
ctttgtcaatcctctcctcctcttcaggcaagtgaggctgccgcctgggctgatagcccc
cttcctttggccgaacggctgaaactaagactgcagagcagttga
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