Podarcis raffonei (Aeolian wall lizard): 128410558
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Entry
128410558 CDS
T09310
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128410558 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128410558 (HBS1L)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128410558 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
128410558
NCBI-ProteinID:
XP_053237944
LinkDB
All DBs
Position
3:complement(62364077..62409392)
Genome browser
AA seq
680 aa
AA seq
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MARHRNVRGYNYDEDFEEDDLYGQSVEDDFCISPSTAAQFIYSRRDNPTAYAETLEEKYD
YEAEHSNDCIPSHQLTGAEKAKLDLCLDRMREVLEKSVPEKVMVEAVLNSKFDVQQALDS
VLAQDNKQNKIKNEDAIIAGKATKGKVRDSQTSRIESDVVPKVTKMTVSGKRQTTGFEVP
CVNAEENGHMPQKGLSAGDANVGVTEILPKPAFPPQTVQVSEEPTLTPTSVKKSGKAKQQ
IDVKAELEKRQGGKHLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGK
ASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAMADV
AILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEIVSK
LGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQASELTKWYEGKCLLEQIDSFKPPQRSV
EKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQVGDRLLAMPPNETCTVKGIALHDEPVDWA
AAGDHVTLTLTGMDIIKINVACIFCCPKEPIKACTRFRARILIFNIEVPITKGFPVLLHF
QTVSEPATIRRLLSVLHKSTGEVTKKKPKCLTKGQNALVELQTQRPVALELYKDFKELGR
FMLRYSGSTIAAGVVTEIKE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtgcgtggctataactacgacgaagactttgaagaagatgat
ctttatggacagtctgtagaggatgatttttgcatttcaccttcaacagctgctcaattc
atttactcaagacgcgataatcctactgcatatgctgagacattagaagaaaaatacgat
tatgaagcagaacatagcaatgattgtattccaagtcaccagctaacaggtgctgagaaa
gctaagcttgatttgtgccttgatcgcatgagagaagtgcttgaaaagtctgtgcctgag
aaagtgatggtggaagcagtattgaacagtaaatttgatgtacaacaagctttggattct
gtacttgcccaagacaataagcaaaataagatcaagaatgaggatgccataattgcaggg
aaggcaacaaaaggaaaagtcagagattcccagacaagcagaattgaatctgatgtcgtg
ccaaaagttaccaaaatgactgtgtctggaaagagacaaactaccggctttgaagttcca
tgtgtgaatgctgaagagaatgggcatatgccacaaaagggactctcagctggagatgcc
aacgtgggggttactgagattcttcctaaaccagcttttccaccccagactgttcaagta
tcagaagaaccaaccttgacaccaacttcagtgaaaaagtccggaaaagcaaaacagcaa
atagatgtgaaagctgagctggagaagaggcaaggaggaaaacatctacttaaccttgtg
gtaataggacatgttgatgcaggaaaaagtaccctcatgggtcatttgctgtatcttctg
ggcaatgtgaacaaacgaactatgcacaaatatgagcaagaatcaaagaaagctggaaag
gcatcatttgcttatgcatgggtcttggatgagacaggggaagagagagagaggggagtg
acaatggatgtaggtatgaccaaatttgagacaaagacaaaagttattacattgatggat
gctcctggccataaagacttcattccaaatatgatcacaggagctgcaatggctgatgtg
gctatattagtggtggatgccagcagaggggagtttgaagcaggatttgagactggtggg
caaacacgagaacatggactgttggttcgatctcttggagtcacacagctggcagttgct
gtcaataaaatggaccaggtcaattggcaacaggaaagatttcaggagattgtcagtaag
ctcgggcagttcctgaagcaagctggctttaaggagtcggacgtagcttatatacctaca
agtggacttggtggtgaaaatcttgtcacaagaagtcaagcgagtgagctgacgaaatgg
tatgaaggaaaatgcttgttagaacaaatagattctttcaagccacctcaaagatcagtg
gagaaaccattcagattatgtgtatcggatgtttttaaagatcaaggatcgggattttgt
gtgactggtaaaattgaagcaggatatgttcaagttggagatcgactgctagcgatgcct
cctaatgaaacttgcactgtaaaaggaattgccctacatgatgaaccagtggattgggct
gcagcaggagatcacgttactctcactttgactggcatggatatcatcaaaatcaatgtt
gcgtgcatattttgttgccccaaggaacctattaaagcttgcacacgtttcagagctcgg
atcctcatcttcaatattgaagttcctatcaccaaaggattccccgtgcttctacatttt
caaactgtaagcgagcctgccactattaggaggttattgagtgtgcttcacaagagtaca
ggtgaagtcacaaagaaaaagcctaagtgtttgactaaagggcagaatgctttagtagaa
ctgcaaacacaaaggcctgttgctctggaactttataaagacttcaaagaacttggaagg
ttcatgttgcgctacagtggctccaccatagctgcaggagttgttacggagataaaagaa
tga
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