Podarcis raffonei (Aeolian wall lizard): 128410602
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Entry
128410602 CDS
T09310
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04217
Necroptosis
praf04621
NOD-like receptor signaling pathway
praf04623
Cytosolic DNA-sensing pathway
praf04625
C-type lectin receptor signaling pathway
praf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128410602
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128410602
04623 Cytosolic DNA-sensing pathway
128410602
04625 C-type lectin receptor signaling pathway
128410602
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128410602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128410602
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
praf04054
]
128410602
Membrane trafficking [BR:
praf04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
128410602
Pattern recognition receptors [BR:
praf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128410602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
NOD2_WH
LRR_6
FISNA
nSTAND3
LRR_4
AAA_16
AAA
NB-ARC
AAA_22
AAA_14
Motif
Other DBs
NCBI-GeneID:
128410602
NCBI-ProteinID:
XP_053238464
LinkDB
All DBs
Position
1:79329889..79346864
Genome browser
AA seq
964 aa
AA seq
DB search
MGNKSSRISDLLLLVLDDLSQEDFKRFKDKLSYSDLEGKRFIIPRSRLENVDRVDTKNLL
LKCYGGDDAIDVTIQVLSDINQKESAAKLRKEKEKGLVSGQKALEISPKDYRIKYREYVW
EEYQVIQDKNALLGQWVNLNRRYTQLLIIQKHCLLEEKQHEIMSTGRKHANMMGKQASPG
SIAALFDPDDNRVNPRTVVLQGPAGIGKTMTARKIMLDWAVGKLYQGKFDYAFYINCREI
NLMTEQQSLIDLIFWNCPERNAPLEDIFANPERLLFIIDGLDELKFSLESNRNXLCFDPS
QKKPVKVVLRSLVRKSILPKSYLIITTRPIALEQLQKCLKYPRYIEILGFSEKDREEYFH
KYFGNERQAVQAFGVVKANEMLFTMCFVPIVCWIICTVLKQQMDRGEDLVQTSKTTTCVY
MFYLTSLLRDHSPVLERGKQKHFQNLCLLAREGVLTRKILFEDDDLQKHGLKEADIRSLF
LHKKLFQQDIDCQSAYSFIHLSFQEFFAALSYVLEEIPEMADKSDSCYDDVRKLLKDFGE
GGNEYLVLTVRFLFGLLNEKRKKTIEKSLGCKICSETKQVLLEWIEAEVASKSCQKQSEI
FCCLYEIQEEEFVGRAMDCIPEIKLYDNCLGNAFNSLVLSFCLRHCRKEQSFHLGYLLFL
SSLYFNGRVDENLPLLFEGLKDPRCNVREICFKRCNLRAVSFEILTSVLTMNQHIREFNL
QQSDLGEVGVIKLCQALKHPNCKLQTLRRVLIGAFYQNRKGRTWVTLARVAIQNGLLVPK
DTQPVTGGLRCCNLSPKSCEKLASIVPKNQNLRMLYLDFNNIGDAGLIELCQMLVHPDCQ
LQVLSLLGCNLTAACCVNLASVLCKNQSLLELSLGHNEEMGEAGVQLLCEGLQHPNCKIV
SLRLDSCGLTEACWEAFLAALKTNQSLRELDLQNNDDLKRYLEADKRSRIRKLKQHNFRI
QISL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaaaagcagccgaatcagtgacctgctcttacttgtgctcgatgacctttct
caggaagacttcaaaaggtttaaagacaagctctcctattcagacctcgaaggaaagcgt
ttcataattccccgaagtcggctagagaacgtggacagggtagacaccaagaatctcctg
ctcaagtgttatggtggagatgacgcaatagatgtaaccatacaagtgctctcggatatt
aatcagaaagagtctgctgctaaactcagaaaagagaaagagaaaggtttggtgtccggt
cagaaagcactggagatatcaccaaaagattacaggattaaatacagggaatatgtatgg
gaagaatatcaagtaattcaagacaaaaatgccctccttggtcaatgggtgaacctaaac
agaagatacacccaactcttgatcattcagaaacattgcctgctggaagagaaacagcat
gaaattatgtccacaggaaggaaacatgccaatatgatgggcaagcaagccagtccaggt
agtattgcagctttatttgatcccgacgataacagagtgaaccctagaactgtcgtgctc
caaggacctgctgggattggaaaaacaatgaccgcgaggaagattatgttggactgggca
gttggcaaactctaccaaggcaagtttgattatgcattctacataaactgcagagaaatt
aacttgatgactgagcagcagagtctgattgatttaatcttttggaactgtcctgagaga
aatgctcccctggaagatatttttgcaaacccagagaggctcctgttcataatcgacggt
cttgatgaactgaaattttccttagaatccaataggaacnatctgtgtttcgatcctagt
caaaagaagccggtgaaagttgtactgagaagtttagtcaggaaaagcattcttcccaaa
tcatatttaatcatcactacaaggccaattgctctggagcaactgcagaagtgtctgaag
tatccccgctacatagagatcctggggttttctgagaaggacagggaagagtatttccac
aagtattttgggaatgagaggcaagcggtacaagcttttggggttgtgaaagcaaatgag
atgctcttcaccatgtgctttgtccccattgtgtgttggatcatctgcactgtgttgaag
caacagatggatagaggagaagatctcgtgcagacttcaaaaacaactacttgtgtatac
atgttttatttaactagcttactcagagatcacagtccagtgttggaaagaggtaaacag
aaacatttccaaaacctttgtctcttagccagagaaggagtcttgacaaggaaaatactc
tttgaggatgatgacctccaaaaacatggcttaaaggaggctgacatccggtcactcttc
cttcacaagaaacttttccagcaagatattgattgccaatctgcctacagcttcatccac
ttaagtttccaagagttttttgcagccttgtcctacgtgctagaggaaataccagaaatg
gccgacaaatcagatagctgttatgacgacgtgagaaagttgctaaaagattttggagaa
ggtggaaatgagtacttagtgttgacagtccgctttctgtttggtcttttaaatgagaaa
aggaagaaaaccatagagaaaagtttaggctgcaaaatttgttcagaaacaaaacaagtg
cttttggagtggatcgaagctgaggtggcatcaaagagctgtcaaaagcaatctgagata
ttctgttgcttatatgaaattcaagaagaagagtttgtgggaagagcaatggattgtatt
cctgagattaagctgtacgataactgcctagggaacgcattcaactctctggttctttca
ttttgcctgagacactgtcgtaaagaacagtccttccatcttggatatctactttttttg
tcaagcttatattttaatggaagagtggatgaaaacctgcctctcctatttgaaggactg
aaggatccaaggtgtaatgtaagagagatctgttttaagcgatgtaatctcagagctgtt
tcctttgagattcttacctctgtcctcaccatgaatcaacacatcagagaattcaactta
cagcaaagcgacctaggagaagtgggagtgatcaaactctgtcaagcactcaagcatccc
aactgcaaactgcagacactgaggcgagtactcataggtgccttttatcaaaatcgtaag
ggcagaacctgggttacacttgccagggttgctatccaaaatggccttcttgtgccaaag
gatacccagcctgtcactggaggattacgttgctgtaacctcagccccaagtcatgtgag
aaattagcctctattgttcctaaaaaccagaacctgagaatgctttatttggactttaac
aatataggggatgctggactaatagagctctgccaaatgttggtgcatccagactgccaa
ctgcaggtactcagcttgcttggttgcaatctcactgctgcttgctgtgtgaatcttgct
tctgttctctgtaaaaaccagtccctgctagagctgtctctaggccataatgaagaaatg
ggagaggctggcgtgcagctcttatgcgaaggccttcaacatccaaactgcaaaatagtt
tcgctaaggttggattcatgtggactgacagaggcatgttgggaagcctttttggcagct
ctcaaaacaaaccagtctctgcgagagcttgatctacaaaataacgatgatttgaagagg
tacctggaagctgataaacgaagcaggattagaaaattgaagcagcataactttagaata
caaataagcttatag
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