Podarcis raffonei (Aeolian wall lizard): 128410682
Help
Entry
128410682 CDS
T09310
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128410682 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128410682 (ARID1B)
03021 Transcription machinery [BR:
praf03021
]
128410682 (ARID1B)
03036 Chromosome and associated proteins [BR:
praf03036
]
128410682 (ARID1B)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
ARID
128410682 (ARID1B)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128410682 (ARID1B)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128410682 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
128410682
NCBI-ProteinID:
XP_053238215
LinkDB
All DBs
Position
3:70371492..70719297
Genome browser
AA seq
2450 aa
AA seq
DB search
MIMAAQVAAAPAGANKKGKTPSLPGNLSQDLNSGGPVAGTAGAAGPGSLLGVVDGTNSSS
SSGGLNNVDHHLLHHHNELNMANNATSAAATGNNNSGSSSESVLKEAGSSSGLPSSSSSS
STPAMETGLLPNHKLKSVGGDHPAAAAATAAPSHHPHAQHQHPAHLHAQHPHAHHHHHHH
HHALPHQQLNQFQQQPPPQHHPMQNNNNGGCGGGSNNNGGGAAQPSSADMEQQHGGKDSG
LGGQAEPQSRPQSQPLANKGGGGDEEAATPPDKMGEQHLGSRYDHPGLGPLSGQPPPPPQ
GAGSGGGAGGGGGGGPSAVGVSEFNSYYGSAGGGSSSSSGGASSASRAGPCFDQHGGQQS
PGMGLMHPAAAPNSMDPLPNSHEGYANSQYNHYAGAYGRPGGGSNAGGGAGAAAAAAAAA
AAGGGGGGGGGYGGSSSAFGVLNSPRQHQQGMMLGPGGGGGSLGKASGSAGFQRFSGQNQ
HPSGATPTLNQLLTSPSPMMRSYGTGYPDYANPTAAPSQQQQAQGVAAAAAAAPGSQQAA
AAGMGKDMGSQYGGANPAWAAAQQRNHPAMSPGNTGQTISRSQGNPMDPMVMKRPQLFAV
GNSPHSQTQTSSPYPGQSYGPPGQQRFPMAMQSRTPGSMGGMQYPQQQMPPQYGPQGVSG
YCQQPYYNQQPQPQHLPSQAQYLSQAQQRYQTQQEMSQEAYGSRSQPPITQGKPNHEEMN
LIQQERPSSLPVEVLASEDASCGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSN
PAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPSQTPGSQSE
SSSHPALSQSPMPQDRGFLAGIQRNPQLSQYTPQQTGPSMSPHPSPGGQIHSGIGSFPQS
NSSGTYGTQMNQYGPQGNYSRQPTYSGVTNTSYSGPGPGMGINASSQMHGQGPGQPCGTI
PLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAA
NSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGSTQAPMMHQPDQYGQGSFPVINQSG
IMGSSSPYTQPMNNNSSLMNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPIPLKPD
GKEDGPPQFESKKDSYISQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSIGSPGWP
KTPSSPKSNSSTTTGEKITKMYELGNEPERRMWVDRYLNFMEERGTPVASLPAVGKKPLD
LFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERG
EEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTP
HGQMTPLQGNRNSSISVHDPFSDVSDSTFPKRNSMTPNAPYQQSMNMPDMMGRMPYEPNK
DPFGGMRKVPGNSEPFMTPGQMPNSGMQEMYNQTPSGAMSNMGMGQRQQFAYGSGYDRRS
DHGLGPEGSMGAPGQSNMVPSNSDPSMYSPNRYPGQQRHEQYGPQYPVQVPPSGQPPYGG
HQPGMFPQQQNYKRHMDGMYGPPAKRHEGDMFNMQYSGQQQDMFNQYSAYSGPDRRPIQG
QYPYPYSRERMQAPGQMQQHGIPPQMIGGPMQSSASSEGPQQNMWPTRNDMSYPYQNRQG
PGGPAQAPPYPGMNRTEDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSS
YQTTPSMPNHISRAPSPASFPRSHENRMSPSKSPFLPSMKMPKVMPTVPVSQVAGPPTQP
PPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTIN
ILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGHPGPKILDHNSAQKE
DAQSATQEASKEENNDECIDYFGEFEDEEEEEEENENPEEEKSTVLAPPGAIADPSERPK
QASKFDKLPIKIVKKNNLFVVDRSDQLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKME
IPPRRKPPLPSNSSSKKKNVEGKREPEEQQDKSISATIDDVLSARPGALSEDSDSSSQTD
SSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVP
GNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEADKGVACSKDEWWWDCLEV
LRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQ
RLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLA
QGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAA
KALLAMARVEENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtagcagcggctccggcgggtgcgaacaagaaaggcaaaacc
ccgagtttgccgggcaacttaagccaggatctcaactcggggggtcccgtggcaggcacc
gcaggagctgctggaccgggctccctcttgggggtcgtagatgggactaacagcagcagc
agcagcggcggcttgaataatgtagaccaccatctcctccaccaccataatgaactgaac
atggccaataatgcaacttctgccgccgccaccggtaataacaacagcggttcttcctcg
gaatcggttctgaaagaagctggaagctcgtcgggtttaccttcctcctcctcttcttct
tctaccccggctatggagacagggctgctccccaaccacaagttgaaaagcgtcggaggc
gatcaccctgctgccgccgccgccaccgccgcaccttcccaccacccccatgcccagcac
cagcacccagctcacctccatgcccagcacccccatgctcaccaccaccaccaccaccac
caccatgcacttccacaccaacagctaaatcaattccagcaacagccgccgcctcagcac
catccgatgcagaataacaacaacggcggctgcggcggcggcagcaacaacaacggcggc
ggcgctgctcagcccagcagcgcagacatggagcagcaacatggaggaaaagacagcggc
ttagggggacaggccgagccccagagccggccacagtcccagcccttggcgaataaaggc
ggcggcggcgacgaagaggcggcgacgccgccggacaaaatgggcgagcagcacctcggc
agccgctacgaccaccccggcttgggacctttgagcgggcagccgccgccgccacctcag
ggagcgggcagcggcggaggcgctggaggaggcggcggcggcgggccctcagcggtgggt
gtctcggagtttaatagctattacggcagcgctggcggcggcagcagcagcagcagcgga
ggcgcctcctcagcgagccgggctgggccttgctttgatcaacatggcggacaacaaagc
cccgggatggggctaatgcaccccgcggcggcccccaacagcatggaccccctgcccaac
tcgcacgaaggctacgccaacagccagtacaaccactacgcgggcgcctacggccggcct
ggcggcggcagcaacgctggaggaggagcaggagcggcggcggctgcagcagcagcagcg
gcggcgggaggaggaggaggaggtggcggcggctatgggggctcctcgtctgccttcggg
gtgctgaactcccccaggcagcaccagcagggcatgatgctgggcccgggcggaggagga
ggcagcctcggcaaggcgtcggggtctgcgggcttccaaaggttctccgggcaaaaccaa
cacccgtctggggccaccccaaccttgaaccagctgctcacttcccccagccccatgatg
aggagctatggcactggctaccccgattatgccaaccccactgctgccccatcgcagcag
cagcaggctcagggagtagcagcagcagcagcagccgccccaggaagccagcaggcagca
gcagcaggcatgggcaaggacatgggttcccagtatggaggtgcaaacccagcctgggca
gcagcacaacaaagaaatcacccggctatgagccctggaaacactggacagaccatcagc
aggagccagggcaacccaatggatccaatggtaatgaaaaggcctcagttgtttgcagtg
ggcaacagccctcactcccagactcagacaagcagtccatatccagggcagtcgtatgga
cctccaggacaacagcgctttccaatggcaatgcaatcccggactccaggttccatgggg
ggaatgcagtatccacagcaacagatgcctcctcagtatggtccgcaaggtgtaagcggt
tactgccaacagccatattacaaccagcagccacaacctcagcatctgccgtcccaggcc
cagtatctgtcccaggcccaacagaggtaccagacacagcaggaaatgtctcaggaagcc
tatggatccaggtcccagcccccaatcacccaaggcaagcctaaccatgaagaaatgaat
ctaatccaacaagagaggccatcaagcttaccagttgaagtcttggcctcggaggatgct
tcatgtggactcaaggatttatcgggttccattgatgacctgcccacaggaactgaagca
acactgagttcagcggttagtgcatcaggttccaccagcagtcaaggggagcagagcaac
ccggcacagtcgcctttctcccctcatgcctccccacatctctccagtatccctgggggg
ccttccccttcccctgtgggctctcccgttggaagcaaccagtcaagatctggtcccatt
tctcctgcaagtattccaggtagccagatgccatcccagactccaggtagccaatcggaa
tccagctcccatcctgccttgagtcagtccccaatgccacaagatcgaggtttcctggca
ggcattcagagaaaccctcaattgtctcagtacacgcctcagcaaactggaccatctatg
tcaccccatccttcacccggaggccaaatacattctggaattggtagctttccacagagc
aattcaagtggtacttatggaactcagatgaaccagtatgggccacaaggaaactactcc
agacagccaacgtactctggagtgaccaacacgagttacagtggcccaggacctggtatg
ggtataaatgccagcagccagatgcatggacaagggccaggccagccttgtggtaccata
cccctgggacgaatgccatcagctgggatgcagagcagaccgtttcctggaaatatgagc
agtatgacccccaattctccaggcatgtctcagcagggaggcccagggatgggaccaccc
atgccgactgtgaaccgtaaggcacaggaggcggctgcagcagtgatgcaggctgccgca
aactccgcccagagcaggccaccatacattaggtcgcctgcttatcccagccagtctggg
gctggcggacgccccatgttttcttcacagcaccccaactatggcagcactcaggctccc
atgatgcatcagcctgaccagtacgggcaaggcagttttcctgtcatcaatcagagcggc
attatgggatccagctctccctacacccagccaatgaacaacaactcaagcctgatgaac
cctcaagctcctccttacagcatggcacctaacatggtgaacagttccacagcccctatg
ggtcttgcagatatgatgactccaggcgagtccaaactgcccatccctctcaagccagat
ggaaaagaagatgggcctcctcagtttgagagcaaaaaggatagctacatctctcagggt
atttcacagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagttct
gctagcatctcctcatttcatggagatgaaagtgatagcattggcagcccaggctggcca
aagactccatcaagccctaaatcaaattcgtctaccacaactggagagaagatcacaaaa
atgtatgagctgggaaacgaaccagagcgcagaatgtgggtggatcggtatctcaacttc
atggaagagaggggaacgcctgtggccagtctgcctgctgtaggcaagaagccactagat
cttttcaggctgtatgtctgtgttaaggagattggaggtttagcacaggttaataaaaat
aagaagtggcgtgagctggcaaccaacctaaatgttggcacttcaagcagcgcagccagc
tccctgaaaaaacaatatatccagtacctgtttgcctttgaatgcaagattgaacgaggg
gaggagccccctccagaagtcttcagcacgggagataccaagaaacaacctaagattcag
ccgccatctcctgcaaattcgggttcccttcaaggtccacagacacctcagtcaactggt
agcaattccatgactgaagtaccaggtgacctcaagcctccaacaccagcatctacacct
catggacaaatgacacctctgcagggcaacagaaatagttccattagtgtgcatgatccc
ttttcagatgtaagtgattcgacattcccaaagcgaaactccatgaccccaaatgcacct
tatcagcagtctatgaatatgccagatatgatgggaagaatgccctatgaaccgaataag
gacccttttggtgggatgagaaaagtgcctggaaacagtgaacccttcatgacccctgga
cagatgcccaacagtggaatgcaggaaatgtacaaccagactccctcgggggcaatgtcc
aatatgggcatgggccagcgccagcagtttgcctatggaagtggttatgaccggaggtcg
gatcatgggctgggtcctgaaggcagtatgggagcacctggtcaaagcaacatggtgcct
tcaaacagtgacccaagcatgtactctcctaaccgttaccctgggcagcaaaggcatgaa
caatatgggccgcaatatccagtgcaagtacctccttcaggacagccaccctatggggga
caccaacctggaatgtttccacaacagcagaactacaaacggcatatggatggcatgtat
gggcccccagcaaaacgccatgaaggagatatgtttaatatgcagtatagtggccagcag
caggatatgtttaaccagtacagtgcttactctggaccagaccgaaggcccatacaggga
cagtatccatatccttatagccgagagagaatgcaggcaccgggacaaatgcagcaacat
ggaatacctcctcagatgattggtggtcctatgcagtcatcagcctctagtgaaggcccc
caacagaacatgtggcccacacgaaatgatatgtcttacccatatcaaaataggcaaggc
cctggaggccctgcacaggccccaccttatccagggatgaaccgcactgaagatatgatg
gtccctgaccagaggataaaccatgaaagccagtggccttctcatgtcaaccaacgtcag
ccttcttacatgtcatcctctgcctccatgcagcctatcactcgacctcctcagtcatct
taccagacgacgccgtcgatgccaaaccacatctctcgagcgcctagtcctgcatccttc
ccacgctcccatgaaaaccgtatgtctccaagtaaatcccctttcctgccctccatgaag
atgccgaaagttatgcccactgttccagtctcacaggtcgcaggtcctccaacccagcca
ccaccaattaggagggaaataacttttcctccaggctctgtagaagcatcccagccagtc
ttgaaaccaagacgaaagattacctcaaaagatatagtgactcctgaggcttggagggtg
atgatgtcacttaaatcaggccttcttgctgaaagtacttgggctttagatactattaat
atccttctgtatgatgacagtactgttgctactttcaatctctctcagttatccggtttt
cttgagctgttggtggaatactttagaaaatgcctgatagatatatttggaatcctcatg
gaatatgaagtcggacatccaggaccaaaaatacttgatcataattcagcccagaaagag
gatgctcagtctgcaacgcaagaagccagcaaagaagaaaacaatgatgaatgtattgat
tattttggtgaatttgaggatgaggaagaggaagaagaggaaaatgagaaccctgaagaa
gagaagagcactgttcttgctccccctggtgccattgctgatccaagtgagaggccaaaa
caagccagtaagtttgacaagctgccaataaaaatcgtaaagaaaaacaacttgtttgtt
gtcgaccgatctgaccagctggggcgtgttcaggaattcaacagtggtctcctccactgg
cagctgggtgggggtgatacaaccgaacacatccagacccactttgagagtaagatggag
attcctcctcgcaggaaaccgcctcttccatccaactcttcaagtaaaaagaagaatgtg
gaggggaaaagagaacctgaggaacagcaagacaaaagcatatcagccaccattgacgat
gtcttgtcagctcgcccaggagcactgtctgaagactcagactctagttctcagacggat
agcagtaaatttccatttgggatccaccaagccaaaagtcatcggaatatcaagttgcta
gaggatgagccacggagtcgagatgagactcctctatgcaccataactcactggcaggac
tctttggccaaacgttgcatctgtgtgtcaaacattgtccgcagcttgtcttttgtgcct
ggcaatgatgctgaaatgtcaaaacatccaggcttggtgctgatcttaggaaagttgata
cttctccatcatgaacacccagaaagaaagcgtgcaccacagacatatgaaaaagaggaa
gaggcggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgccttgaggtc
ttgagggataatacattggtcacattagccaacatttctgggcagctagacttatctgct
tacacggaaagcatctgtttgccaattttggatggcttactgcactggatggtgtgccca
tctgcagaggcacaggatccttttccaactgtggggcccaactcagtcctgtcgcctcag
agacttgtactggaaaccctgtgtaaactcagtatccaagacaataatgtggaccttatc
ttggccactcccccattcagtcgtcaggagaaactctatgctactttagttaggtacgtt
ggggaccgcaaaaatccagtctgccgagaaatgtccatggcactcttatcgaaccttgcc
cagggggacacattagcagcaagggcgattgctgtgcagaagggaagcatcggaaacttg
ataagcttccttgaggatggggtcactatggcccagtaccagcagagccagcataacctc
atgcacatgcagcccccgcctctggagccacctagcgtagacatgatgtgcagggcagcc
aaggctttgctggccatggcccgggtggaggagaatcgctcagagttcctattgcacgaa
ggacgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatc
tgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
