Podarcis raffonei (Aeolian wall lizard): 128410803
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Entry
128410803 CDS
T09310
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128410803 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128410803 (TAF5L)
03036 Chromosome and associated proteins [BR:
praf03036
]
128410803 (TAF5L)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128410803 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
128410803 (TAF5L)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128410803 (TAF5L)
STAGA complex
128410803 (TAF5L)
TFTC complex
128410803 (TAF5L)
SAGA complex
128410803 (TAF5L)
SLIK complex
128410803 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_EIPR1
PEP5_VPS11_N
PROPPIN
Ge1_WD40
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_IP5PC_F
Mala_s_1-like
Nbas_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
128410803
NCBI-ProteinID:
XP_053238477
LinkDB
All DBs
Position
3:76805935..76818288
Genome browser
AA seq
590 aa
AA seq
DB search
MKRVRTEQIQMAASCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGSANIISA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKEIIEQLQTTLTMQDILSNFQLRAFLDNKYVIRLQEDSYNFLLRYLQ
SDDNNALCKVLSLHIHLDVQPAKRMDYQLYGSGGSSRSESNGLEPTDMPASILQNEAALD
ILQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCVKLWSLRSK
KLKSEPHLVDVSRIHLACDILDEEGEDDDNNVGTEMKILRGHCGPVYSTRFLSDSSGLLS
CSEDTSIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTGRLWSFDRTYPL
RIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPN
GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI
RNTYCNAPVDGSSSELVGVYTGQINNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtacgcacagaacagattcagatggcagcttcctgctacctcaaacgcagg
cagtatgtagactcggaaggtcctctgaaacaagggcttcgcttatgccagactgcagaa
gaaatggcagctaatctaacagttcagtctgaatcaggtagtgccaacattatctctgct
gcaccctgcctagcagagccacaacaatatgaagtacagtttgggcgattacgcaacttt
cttacagattcagattcccagcacagccatgaagtgatgcctcttctgtatcccctcttt
gtctacctccatcttaacatggtccaaaatggcctaaagagcacagtggacagcttctat
agtcgctttcatgggatgttcttgcagaatgccagccaaaaagagatcattgagcagcta
cagaccacactaaccatgcaagacatcctatccaacttccagctccgggcatttctagac
aacaaatacgtcatccgccttcaagaagacagctacaacttcctccttcgctacctccag
agtgacgataacaatgctctttgcaaagtcctctccttgcacattcacttagatgtgcag
ccagccaagaggatggactaccagctgtatggtagtggtggctcttcacgcagtgagagc
aatggcctggagcccaccgacatgcctgcttccatcctgcaaaacgaggccgccttggac
atcctgcaggatagcattaaaagagtcaaagatggaccgccctcgctcaccaccatctgt
ttctatgcgttctataacactgaacagttgctgaacactgcagagatctctccagatagc
aagctgcttgcagctggctttgacaattcctgtgtaaagctgtggagcttgcggtccaag
aagctgaaatctgagccccatctggtagacgtctcccgcatccacctggcttgtgatatc
ttggatgaggagggtgaagatgacgataataacgtgggaacagaaatgaagatactaaga
gggcactgcggaccggtgtatagcacaaggtttctgtcggacagttcaggactgctgtcg
tgttccgaagacacatccatccgatactgggaccttggatgtttcacaaacactgtgttg
taccaagggcacgcctatcctgtgtgggatctggacattagcccttgtagcttgtacttt
gccagcggctcccatgaccgcacaggaagactctggtcatttgatcggacgtacccactg
aggatatatgcaggccatttggcagacgtggactgcattaagtttcaccccaattctaac
tacttggcaacaggatccacagataaaacagtgcgtctctggagcacacagcaaggaaac
acagtgcgcctgtttacaggtcaccggggccctgtgttgtcgcttgcgttttctccaaat
ggtaagtatttggcttcagcaggtgaagaccagcggttaaagctgtgggacctggcatct
ggcacactttacaaagaactaagagggcacacggataatatcaccagccttactttcagt
ccggacagtagcttgattgcttctgcatcaatggataattctgttcgggtttgggatatt
cgaaacacttactgcaatgctcccgtcgatggttcttccagtgaactggttggtgtatat
actggacagataaataatgtactgagtgtacagttcatggcctgtaacctccttttagtg
actggaattgcacaagagaatcaggaacattaa
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integrated database retrieval system
