Podarcis raffonei (Aeolian wall lizard): 128411179
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Entry
128411179 CDS
T09310
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128411179 (TRERF1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
128411179 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
zf-C2H2
ELM2
zf-C2H2_4
Myb_DNA-binding
Myb_DNA-bind_7
zf-C2HE
Zn_SUZ12
zf-met
Motif
Other DBs
NCBI-GeneID:
128411179
NCBI-ProteinID:
XP_053239255
LinkDB
All DBs
Position
3:complement(100334901..100359208)
Genome browser
AA seq
1207 aa
AA seq
DB search
MGDQQMYKTSHVVNNNESLYYQQQQQQHLNSLAPLNHSYGTSAMDATQESPLSPSFPQDT
RENIALNAGSKTLGLMDSPRQSSWAHLGSGNHAPVRNNQNVMWGSAGQGEVTDGYEHLCS
QANEVRSQKMTSGVLHKLDSFAQVFANQNLRIQVNNVSQVIQPSAMGGTGDSALRQLLSQ
KPAVEQQPAVQRYQQLPQQVHQGFVGTPQKQHMHMMAHQQPLYYDEQQHLAHLQMHPAMH
QGQAHFQQMHSQHLMPQQLQQDQYYLQQQQQQQQQQQQQQSHQGQHRLLIHELQQQQQQQ
QQRQCPVQTAQYYSIQPMMQQLQQQQQQMQMQLPAFHRDPDQKPLHETHQYSQDRGHSVQ
LIQLGAVPQYFYQDQQQPFRHLYPQSLLQQQQPPPGDASQPNHYQSNNKAQALMDSHPGF
PLAEGTEGPVQQDMNSVAGGVPQQPLMPPEGIHVDSKGPQPLSPGPMWPQQQVHLPEGRL
QSVSPEQSSIHDKETHSERSETKSKLTCTVCLKEFKSLPALNGHMRSHGGIRASPALRQC
SSWEQSTVEAECLWLSAQDEGESLPQPQRQHQQEQLPSEAESFVPIVMPVSVPVKLPSPD
PGKQAADSSAVLKDKPVSDDEMPVLVRMTCSPPCSPNVASPCLSSDLNRKQHQSTANSEE
SFKPFQDKKKYRHRPEPLFIPPPSYNLAASHLGATLYQSQLRSPRILGDRLLDSIHDPPP
YTPPPMLSPVRHGSGLFSSVITSAHGASHPQLPLTPLTPTPRMLLCRSNSVDGVSVPITP
GPGEQTIDVEPHINIGSRFQADIPELEDRALVGEEDHMATLVWKPGPELEDEDIQQRVTS
LLNLCCSSVLTGGGTNLEYGLHSLFEAKGDVMVALEMLLLLKPARAKSHPLASYHYAGSD
QWTPIERKLFSKALYTYGKDFILVQKMVKSKTVAQCVEYYYTWKKIMHLGRKHRTRLAEV
KNECLTSGEDDELEEEEQAEEDKKSVKEEAEIQNSPEPPSIIAAEPINLPSLQSPTLPAT
SFTCEMPDCGAMFNSRPALNGHVRIHGGTNPVTKTRGGSHGSKQKSSSQNDYGPAKSSPA
HSTTSGETDPTTLFPCKECGKMFFKIKSRNAHMKTHRQQEEQQRQKAQKAAVAAEMAATI
ARTTGPSGHSLIPLDHLDLIKQVEEADDLSSDVVQELGEVMDGTEVIDPDLLLDEEDTDL
LQDDVEL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcagcaaatgtacaaaacgagccatgttgtcaacaacaacgaaagcttgtat
taccagcagcagcaacaacaacacctaaattcccttgcaccgttaaaccacagctatgga
acatcagccatggatgcaactcaggaatctccgctctccccatcgttcccccaagacacc
agggaaaacatagctttgaatgctgggtccaaaacccttgggttgatggattctcctagg
caatccagttgggcgcatttgggttctgggaaccatgccccagtgaggaacaaccaaaac
gtcatgtggggctcagcggggcaaggcgaagtaactgacggatacgagcatctgtgttcc
caagccaacgaggtcaggtcgcagaagatgacgagtggcgttttgcataagctggactcc
ttcgcccaagtgtttgcaaaccagaacttaaggatccaagtcaacaacgtatctcaggtc
atccagccttcggcgatgggcggcactggcgacagcgcccttcggcagctgctgtctcag
aagcctgcggtggagcagcagcctgccgtgcagagataccaacagctgccgcagcaagtc
caccagggttttgtcggcacgccgcagaagcagcacatgcacatgatggcgcaccagcaa
cccctctattacgacgaacagcagcatttagcccatctgcagatgcaccctgccatgcat
caagggcaggcccacttccagcaaatgcactctcagcacctgatgccgcagcagctacag
caggatcaatactatctgcagcagcagcagcagcagcagcagcagcagcagcagcagcaa
tcccaccaaggacaacataggcttttaatacatgagttgcagcagcagcagcagcagcag
cagcagaggcaatgcccagtgcaaacagctcagtattattcaatacagcctatgatgcaa
cagttgcagcagcagcagcagcagatgcaaatgcaacttcctgcctttcacagagatcct
gaccagaagcctctgcacgagactcatcagtactctcaggatcggggtcattctgtacag
ctcattcagctgggagcagtgcctcagtacttctatcaagatcagcagcaacccttcaga
catttgtatccacaaagcttattgcagcagcagcagccgccaccaggagatgccagtcag
ccaaaccattaccagagcaacaacaaggctcaggcactgatggattcgcaccctggattc
cccttggcagaagggacggagggcccagttcagcaggacatgaattctgtcgctggtggc
gtccctcaacaacctctgatgcccccagaaggtatccacgtggatagcaaagggccacag
ccattgtcccctggtccaatgtggcctcagcagcaggtccatctacctgaaggaagactc
cagtcagtttcccccgagcaaagcagcattcacgataaagaaactcatagtgagagatct
gaaacaaagagcaaactcacatgcactgtatgcttgaaggaatttaagagtttgccagcc
ctaaatggccacatgaggtctcatggagggatacgggcatctcctgccctcagacagtgt
tctagttgggagcagtccacggttgaggctgaatgcctttggttgtctgcacaggacgaa
ggggagagcctgccgcagccccagcgccaacaccagcaggagcagctgccctccgaggcg
gagagcttcgtccccatcgtcatgcctgtgtcggtgcccgttaagctgccgtcacccgat
cccggcaagcaggccgctgacagcagcgccgtgcttaaagataagcctgtctcagatgat
gagatgcccgttcttgtgaggatgacttgctctccgccatgctcccctaacgtggccagc
ccctgcctgtcctctgacctcaacagaaaacagcaccaaagcacggccaactctgaagaa
agcttcaaaccgtttcaagacaagaaaaaataccgccacagacctgagcctctgttcata
ccaccaccttcttacaacctcgctgcatcccacctgggcgcgacgctgtaccaaagccag
cttcgctctccccgcatcctgggagaccgcctgcttgatagcattcacgacccccctcct
tacaccccacctcccatgctcagcccggtacgtcatggatctggcctcttcagcagcgtt
atcacatccgctcatggtgcgtctcacccccagctgccgctcacacctttgacacccaca
ccccggatgcttctctgtcgatctaatagtgttgatggagtcagtgtcccgatcacccca
ggtcctggagaacagaccattgacgtagaaccgcatatcaatattggatcgagattccaa
gccgatattcctgaacttgaagacagagcgttggtgggggaagaggaccacatggcaact
ttagtttggaaaccagggccagaactggaagatgaagatattcagcaaagagtgaccagc
cttttaaatctgtgttgttcaagtgtattaactggtgggggaaccaaccttgaatatggc
ttgcattctctctttgaggctaaaggagacgttatggtcgctctggagatgctgcttttg
ttgaagccagcaagagcaaaatcgcatcctctggcaagttatcactatgctggttcagac
cagtggacacccattgaaagaaagctgttcagcaaagcattatacacatacggcaaagat
tttattttggtacagaaaatggtgaagtcgaagacggtggcccagtgtgtggaatactat
tacacctggaagaaaatcatgcatttaggaagaaagcacagaacacgcttagcagaagtg
aaaaatgaatgcctgaccagcggcgaagatgatgaattagaggaagaggagcaggcagag
gaggacaagaagtcagtcaaagaggaagccgaaattcagaattctcccgagccaccttca
attattgctgctgaacctattaacctgccttccttgcaaagccccacccttccggcgacc
tcatttacatgtgaaatgccggactgcggagcgatgttcaactccagaccagctctgaat
ggccacgttcgcattcatggcggtacaaaccctgtgacgaaaacccgcggtgggagccac
ggttcgaagcagaaatccagctcccagaatgattacggccctgccaaaagctccccagct
cacagcacgacaagtggcgagacagacccaactacacttttcccttgtaaagaatgtggc
aagatgtttttcaaaatcaaaagccggaatgctcacatgaaaacacaccggcaacaggaa
gagcagcaacgacagaaagcccagaaggcggctgttgcagctgaaatggcggctacgatt
gcaaggaccacggggccctctgggcatagcttgatacccttggatcatttggacttgata
aagcaggttgaggaagccgatgacctcagcagcgatgttgttcaggaattgggagaggtc
atggacggtactgaagtgatagaccctgacctcttactggatgaagaagacacagatttg
cttcaggatgatgtggagctgtag
DBGET
integrated database retrieval system
