Podarcis raffonei (Aeolian wall lizard): 128411283
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Entry
128411283 CDS
T09310
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
praf03037
]
128411283 (NPHP1)
Cilium and associated proteins [BR:
praf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
128411283 (NPHP1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
Presenilin
SH3_3
Motif
Other DBs
NCBI-GeneID:
128411283
NCBI-ProteinID:
XP_053239457
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All DBs
Position
3:107349357..107385903
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AA seq
695 aa
AA seq
DB search
MTGRRGRTGPLQSALRRGRELREQVNALLQESKEVGALDSGKKQSLSQRCLELKKSVDEN
ISALQNLKKSDEPAPVGNYNQRKEEEGEKLLLLSAQLDKLTAIFSREDVTKDSSINTKRK
DSPKTLQENEESEEEDEEEEEEEEEEEESTQDDGDDEEDGEDEDKLGDDSAIKFFITLGD
FSAQQEGDLTFKKGEVLLILEKKPDGWWLAKNSKGERGLVPKTYLMVKDDEEGQEPSEEE
TEEDIEVADETEGGANILKRTDSHWSAVKKAITENNTLDALTTMGAVPAGFRPSTLAQLL
EEGVQFRASYFLQPELTPSNLSFRDLVWNPEKGTIQSRPTRLSLIVTLWNCKGIPFPGMS
IQVLSRHVRLCLFDGNRILSNIHTVRATWQPKNPKTWTFSPRVTGILPCLLDGDCFIRSN
SPSPDIGILFELGITYIRNSTGERGELSCGWAFLKLFDSSGLPVSSKTYELLLNGGTPYE
KGVEVDPSILRRASGSVFHNMITLRKQPQLLVKLRSLSTNSRAILNLLPEVLIGSMSYIH
LLLFYRQILGDVLLRDRPNMQNADLIGNPVLATFPKLMEQPDLMDALRSAWAEKESTLKR
SEKRDREFLKSVFVLVYHDSVFPLLQSVLLPEYKWAEEESEGTRWRMIADFLKKNRERDG
ALSSLLSSEGLHKAFDVAEIAYDFLGEARKNNPLV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcgccggggccggacgggcccgctgcagagcgcgctgcgccggggccgagag
ctgcgggagcaggtgaatgctttgctccaagaaagcaaggaagtgggggctctggactct
ggaaagaagcaaagccttagtcagagatgtttggagctgaagaagtctgttgatgaaaat
atctctgctctacagaacttgaagaaatcagatgaacctgcccccgtgggaaattataat
cagagaaaagaagaagaaggagaaaaattgttattgctttctgcgcagctggataaactt
acagcaatctttagccgggaagatgtgaccaaggactccagcatcaatacaaaaaggaag
gacagcccaaaaacactgcaagaaaacgaagaaagtgaagaggaagatgaggaggaggag
gaagaagaagaagaagaagaagaaagtacacaggatgatggtgatgatgaagaggatggt
gaagatgaagacaaactcggagatgattcagctattaaattttttatcactcttggtgat
ttttctgcacagcaagaaggtgacctgacctttaaaaaaggtgaagttctgcttatcctt
gagaaaaagcctgacggttggtggctggctaaaaactccaaaggggagaggggccttgtg
cctaaaacctaccttatggtgaaagatgacgaagagggccaagaaccaagtgaagaggaa
accgaggaagatatagaggtggcagatgaaacggaaggaggggccaacattctgaaaagg
acagattcacactggagtgctgttaaaaaggccatcacagagaataataccttagatgca
ctgacaactatgggagcagttcctgcaggattccgaccttcaacacttgcacagctcttg
gaagaaggagttcagtttcgggcttcttacttcttacaacctgagctcacaccttccaat
ctttctttccgagatctagtgtggaacccggaaaaaggcactattcagtcaaggccaact
cggctgtcactgattgtgaccctatggaactgtaaagggattccttttcctggaatgagc
atacaagtcctgagtagacatgtccgactctgcctttttgacggtaacagaatactgagt
aatattcatacagttagagctacgtggcaacctaaaaatcccaaaacatggaccttttct
ccacgggtgactggcatcttaccgtgcctgcttgacggtgattgttttattagatccaat
tccccatctccggacataggcatattatttgaacttgggatcacttacattcggaattca
acaggtgagagaggagaactaagctgtggctgggcatttctaaaactttttgactcaagc
ggacttccagtttcctccaaaacgtatgagctgcttttgaatggtgggactccctacgaa
aagggcgttgaagtagacccgtcgattttgagaagagccagtggcagtgttttccataac
atgataacactgaggaagcagcctcaacttctagtgaaactgaggtcattaagcaccaac
tccagagcgatattgaatctgctaccagaagtattaattggcagcatgagctatatacac
cttttattattttatcgtcagattcttggtgatgtgctcctccgggacagaccaaacatg
caaaatgcagatttgattggcaatccagttttggcaaccttccccaaactcatggagcag
cctgatctcatggatgcgctcaggagtgcttgggcagagaaggaaagcacgctgaagaga
tctgagaagagagatcgggaatttttgaagtccgtattcgtcctggtgtaccacgattct
gtcttcccccttcttcagtctgtgctcctcccagagtacaagtgggcagaagaagaatct
gaaggcactcgctggcggatgattgccgacttcttgaagaaaaaccgagaaagggatggc
gctctgtcgtctctgctgtcgtcagaaggccttcacaaagcctttgatgtcgcagaaata
gcatatgatttccttggagaagctaggaagaataatcctttagtatga
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