Podarcis raffonei (Aeolian wall lizard): 128411358
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Entry
128411358 CDS
T09310
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128411358 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128411358 (SPTBN1)
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128411358 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
128411358 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
128411358
NCBI-ProteinID:
XP_053239616
LinkDB
All DBs
Position
3:112607938..112786928
Genome browser
AA seq
2358 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVEEWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELEAENYHDIKRITARKDNVFRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHTLVEADISIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGRSSHFQQAIKEGEDMIAEDHFGSEKIRERIA
DIKNQWANLEQLSTIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIASYRSIMDSLHEQAGALPREHAESTDVQSRLSGMEERYKEVAELTRL
RKQALQDTLALYKMLSEADACELWIDEKEQWLINMEIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLIHNGHPGEKEIKAQQDKLNTRWSQFRELVDVKKEALLSALSIQNY
HLECNETKSWIREKTKVIESTQELGNDLAGVIALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQARAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
HQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHKKN
REVASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIEKEGMQLIAEKPETEGIVKEKLTSLHHMWEVLENTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQAQALSQEGKSADEVDSKRFIVEKKFVELLEPLTERKAHLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSLNAE
AIQQRLADLQQLWSLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQSAYAGDKADDIQRRENEVLEAWKTLLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKTGEESQQWDGTKGEQVSQNGLPPDQESPRMGESREANEMVNGAADQRTSSKET
SPVPSPTADRKAKAGLQAQTAATLPAKTQEAPSTLMEGFLHRKHEWESHNKKASNRSWHN
VYCVINKQDMGFYKDAKAASSGIPYHNEIPVSLKEAACEVAVEYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNAWIQAIASAISDKAELSTSTHSTPATSRAQTLPASVTITSESSPGKRE
KEKEKDKEKRFSLFGKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacagtagcgacagactacgacaacattgaaatccaacagcaatacagcgat
gtcaacaaccgctgggatgttgaagagtgggacaacgagaacagttccgcacggctgttt
gagaggtctcgcatcaaagccttagcagatgaacgagaggcagtccagaagaagactttc
actaagtgggttaactctcacttggcacgtgtgtcctgtagaattacagacttgtacgcc
gaccttcgcgatggacggatgcttatcaaactgctggaagttctttcaggagagagactt
cccaagccaacaaagggaaggatgcgcattcactgcttggagaacgtcgacaaagccctg
cagttcctgaaagagcagcgggtgcatctcgaaaacatggggtcccacgatatcgtggac
gggaaccacagactcaccctcggccttatttggactattatattgaggttccagatccaa
gacatcagtgttgaaacagaagacaacaaagagaagaagtctgcaaaagatgcactgcta
ctgtggtgccagatgaagacagccggctatcccaacgtcaacattcacaacttcaccacc
agctggagggacggcatggctttcaacgcgctaatccataaacacaggcccgacctaatt
gattttgataagctgaagaaatcgaatgcacactacaatctgcagaacgcttttaacctg
gcagagcagcaccttggccttactaaactcctggacccggaagatatcagtgttgaccac
cctgatgaaaagtccatcatcacctacgttgtgacatattaccactacttcagcaagatg
aaagctttagccgtggaaggaaagcgcattggaaaggtgcttgacaacgccatcgaaaca
gagaagatgattgagaagtacgagtcgctggcttccgacctcctcgagtggattgagcaa
accatcatcatcctgaacaaccgcaagtttgccaactccctggttggggtgcagcaacag
ctccaggcattcaacacctaccgcacagtggagaagccacccaaattcacagaaaaagga
aacttggaagttctgctcttcaccatccaaagcaaaatgagggctaataatcagaaagtg
tacatgcccagggaagggaaactcatctcagatatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgtaacgagctcatccgacaggagaaactg
gaacaactcgcccgcagattcgaccgcaaggcagctatgagggagacgtggttgagcgaa
aaccagcgtctggtttctcaggacaactttgggtttgacctccccgctgtggaggctgcc
acgaagaagcacgaagccatcgagacggacattgccgcgtacgaggaaagggtccaggcg
gtggttgctgtggccaaggagctggaggctgagaactaccacgacatcaaacgcatcacg
gccaggaaagacaacgtcttccgcctatgggagtacctcctggagctgctcagggcacgc
aggcaacggctggagatgaaccttggtctgcagaagatattccaggagatgctgtacatc
atggactggatggatgagatgaaggtgttgttgctgtctcaagactatggcaagcatctc
ctcggagtggaagacctattgcagaaacacacacttgtcgaggctgacatctccattcag
gccgagagagtgagaggggtcaatgcgtcagcccaaaaatttgccacagacggagaaggt
tacaagccttgcgacccgcaggttatccgagaccgagtggctcacatggagttctgctac
caggagctgtgtcagttagcggccgagcgccgagctcgcttggaagagtcccggcgcctc
tggaagttcttctgggagatggctgaagaggagggctggatcagggaaaaagagcagatc
ttgtcgtcggatgattacggaaaagacttgaccagcatcgtccgccttctcagcaagcat
aaggcgtttgaggacgagatgagtggtcggagcagccacttccaacaggccatcaaggaa
ggcgaggacatgatagccgaggatcactttgggtcagagaagatcagagagaggatcgcg
gacatcaagaaccagtgggccaatctggagcaactctccaccatccggaagaagcgactg
gaagaagcttccctcctccaccagttccaggcagatgccgatgatatcgacgcgtggatg
ttggacatcctcaagattgtctccagcagtgacgtgggccacgacgagtattccactcag
tccttggtgaagaaacacaaagatgtggcagaggagatcgcaagctacaggtccatcatg
gattccctgcacgaacaggccggagccttgccgcgggagcacgcggagtcgacagatgtc
cagagcaggctgtccggaatggaagaaaggtacaaggaggttgctgagctcacgcggctt
cgtaaacaggccctgcaggacaccttggccctgtacaagatgctcagcgaagcggatgcc
tgcgagctttggatcgacgagaaggaacagtggctgatcaacatggagatccctgagaaa
ctggaagacttggaggtgatccagcacagatttgaaagcttagagccggaaatgaacaat
caggcgtcacgggttgctgtggtgaaccagattgcaaggcagctaatccacaatggccat
ccgggcgagaaggaaatcaaggcgcagcaagataagctcaacacaaggtggagccagttc
agagagcttgttgacgtgaagaaagaggccctgctctcagccctcagtatccagaactac
caccttgaatgcaacgaaaccaagtcgtggatcagggagaagacaaaggtcattgaatcc
acccaagagcttgggaacgacctagccggtgttatcgctcttcagaggaagctgactggg
atggagcgcgatttggtcgccatcgaggccaagttaagcgacctgcagaaagaagccgaa
aagttggaatcggagcaccccgaccaagctcgggccatcctgtcgaggctcgctgaaatc
aacgacgtttgggaagagatgaagacgaccttgaagaaccgcgaagagtcccttggggag
gccagcaagttgcagcagtttctgcgcgacctggacgacttccagtcttggctgtcccgg
acccagacggccatcgcctcggaagacatgccgaacacgctgacggaggctgagaagctg
ctcacgcagcatgagaacatcaagaacgagatcgacaattacgaagaggactatcagaag
atgagagacatgggcgagatggtgactcaagggcagacggatgctcagtacatgttcctg
caccagcgcctgcaggccttggacactggatggaacgagctgcacaagatgtgggaaaac
cggcagaaccttctctcccagtcccatgcctatcagctgttcctgagagacacaaagcaa
gcagaagccttccttaacaaccaggaatatgttttggcacacactgaaatgcccaccact
ttggagggggcagaagctgccatcaaaaaacaggaggatttcatgaccacaatggatgcc
aacgaggagaagatcaacgcagttgtagagaccggaaggaggctggttagcgatggcaac
atcaactctgacaagatccaagagaaagtggactccattgatgacaggcataagaagaac
cgggaggtggccagcgagcttctgatgagattaaaagacaacagagatcttcaaaagttt
cttcaggattgccaagagctgtcgctctggattaatgagaagatgcttacagcgcaggac
atgtcttatgatgaagcgaggaacctgcacagcaaatggttgaaacaccaggccttcatg
gcagagcttggttccaataaagagtggcttgacaaaattgaaaaggaagggatgcagctc
atcgctgagaaacccgaaacggagggtatcgtgaaagagaagctgacgagcctgcaccat
atgtgggaagtgcttgaaaacaccacccagacgaaagcccagcggctttttgatgccaac
aaggctgagctgttcacccagagctgcgctgacttggataagtggctgaatggcttggaa
agccagattcagtcagacgactacggcaaggacctcaccagcgtcaatattctgctgaag
aagcaacagatgcttgagaaccaaatggacgttcgtaagaaggagattgaggagctgcag
agccaggcccaggcgctgagccaggagggcaagagcgccgacgaagttgacagcaaacgc
ttcatcgtggagaagaagttcgtggagctgctggaacccttgaccgagaggaaggcccat
cttctggcctccaaggagatccaccagttcaaccgggatgtggaggacgaaattttgtgg
gttggagagaggatgcccattgccacatcgacagatcatggtcacaacctccagactgta
cagttgctcattaagaagaatcagacacttcagaaggaaatccaggggcaccagcctcgc
atcgacgacattttcgagaggagccaaaacatcattacagacagcagccttaatgccgaa
gcaatccagcagcggctggcagacttgcagcagctgtggagcctcctgatagaggagacg
gagaaacgccacaagcgccttgaggagtcccacaaagcccagcaatactactttgacgcc
gcggaggccgaagcctggatgagcgaacaggaactctacatgatgtcagaagagaaggcc
aaggatgaacaaagtgcagtttccatgttgaagaaacaccagattttggagcaggccgta
gaagactatgctgagaccgtgcaccagctatccaagactagcaggactttggtggcagac
aatcatccagagagtgagcgcattagcatgcggcagtccaaagtagacaagctctacgca
ggcctgaaagaccttgctgaggagaggagaggcaagctcgacgagagacacaggcttttc
cagttgaaccgcgaagtggatgacttggagcaatggattgccgaaagggaagtggtggcc
ggatcccacgagctgggacaggattacgaacatgtgacaatgttgcaagagcggttccgc
gaatttgcccgggacaccggcaacattgggcaggagcgcgtggacaccgtcaaccacatg
gccgacgagctcatcaactccggacattctgacgccgccaccatcgccgagtggaaggac
ggtctcaacgaggcctgggctgacctcctggaactcatcgacaccagaacgcagatcctg
gccgcctcttatgaactgcacaaattttaccacgatgccaaggagatctttgggcggata
caggacaaacacaagaagcttcccgaggagcttgggagggaccagaacacggtggaaacc
ttgcagaggatgcacaccacattcgaacacgacattcaggccttagggacacaggtaagg
caactgcaagaagatgccgcccgcctccagtctgcttatgctggagacaaggccgacgat
atccaaaggcgtgaaaatgaggttctggaagcgtggaagaccttgctcgatgcctgcgaa
ggacgcagggtcaggctggtagacaccggggacaaattccgcttcttcagcatggtccga
gatctcatgctttggatggaggatgtcattcgtcagatcgaagcccaagagaagcctagg
gatgtttcctccgtagaactgctgatgaacaatcaccagggaatcaaagcagaaatagat
gcccgtaatgacagctttacaacttgcattgagctgggcaaatcgttgctggcgaggaaa
cactatgcttcagaagagatcaaggaaaagctattgcagctcacagagaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaagtgcaccag
ttttcgagggacgccagcgttgccgaggcctggctgctggggcaggagccatacctgtcg
agccgcgagatcggccaaagcgtggacgaagtggagaagctcatcaagaggcacgaagcg
tttgagaagtctgccgcaacttgggacgagagattttcggcgcttgaaagacttactacg
ttggaattgttggaagtacgtcgacagcaagaagaggaagagaggaagaggcagcctcct
tctccggagccaagccccaagaccggagaggagtctcagcaatgggacggcacaaaagga
gagcaggtatcccagaatggtttgccaccagaccaggaatctcctcggatgggagagtcg
agggaagccaacgaaatggtcaatggagcagcggaccagaggacaagctccaaagagacc
agtcccgtcccgtcgccgacggccgatcgcaaagccaaggctggcctccaggcccagaca
gccgccaccctcccggccaaaacgcaagaagccccttccactctgatggagggcttcttg
catcgcaaacacgaatgggagtcacacaacaagaaggcttcaaacagatcctggcataac
gtctactgtgtcattaacaagcaagacatgggcttttacaaagatgccaaggctgcttcc
tcaggcatcccctaccacaacgagatccccgtcagcctgaaagaagcggcatgcgaagtg
gcggttgaatacaagaagaaaaagcatgtgttcaagctaaggttaactgacggcaatgag
tacctcttccaagccaaagacgatgaggaaatgaacgcatggatccaggccattgcctct
gcgatttcggacaaagccgagttgtccacaagcacacacagcaccccagcgacgagccgc
gcccagaccctgccagccagtgtgacaataaccagcgagtccagtcctggcaagcgggag
aaagagaaagagaaagacaaagagaagagattcagccttttcgggaaaaagaagtga
DBGET
integrated database retrieval system
