Podarcis raffonei (Aeolian wall lizard): 128411358
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Entry
128411358 CDS
T09310
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04517
IgSF CAM signaling
praf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128411358 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128411358 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128411358 (SPTBN1)
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128411358 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
128411358 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
128411358
NCBI-ProteinID:
XP_053239616
LinkDB
All DBs
Position
3:112607938..112786928
Genome browser
AA seq
2358 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVEEWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELEAENYHDIKRITARKDNVFRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHTLVEADISIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGRSSHFQQAIKEGEDMIAEDHFGSEKIRERIA
DIKNQWANLEQLSTIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIASYRSIMDSLHEQAGALPREHAESTDVQSRLSGMEERYKEVAELTRL
RKQALQDTLALYKMLSEADACELWIDEKEQWLINMEIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLIHNGHPGEKEIKAQQDKLNTRWSQFRELVDVKKEALLSALSIQNY
HLECNETKSWIREKTKVIESTQELGNDLAGVIALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQARAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
HQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHKKN
REVASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIEKEGMQLIAEKPETEGIVKEKLTSLHHMWEVLENTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQAQALSQEGKSADEVDSKRFIVEKKFVELLEPLTERKAHLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSLNAE
AIQQRLADLQQLWSLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQSAYAGDKADDIQRRENEVLEAWKTLLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKTGEESQQWDGTKGEQVSQNGLPPDQESPRMGESREANEMVNGAADQRTSSKET
SPVPSPTADRKAKAGLQAQTAATLPAKTQEAPSTLMEGFLHRKHEWESHNKKASNRSWHN
VYCVINKQDMGFYKDAKAASSGIPYHNEIPVSLKEAACEVAVEYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNAWIQAIASAISDKAELSTSTHSTPATSRAQTLPASVTITSESSPGKRE
KEKEKDKEKRFSLFGKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacagtagcgacagactacgacaacattgaaatccaacagcaatacagcgat
gtcaacaaccgctgggatgttgaagagtgggacaacgagaacagttccgcacggctgttt
gagaggtctcgcatcaaagccttagcagatgaacgagaggcagtccagaagaagactttc
actaagtgggttaactctcacttggcacgtgtgtcctgtagaattacagacttgtacgcc
gaccttcgcgatggacggatgcttatcaaactgctggaagttctttcaggagagagactt
cccaagccaacaaagggaaggatgcgcattcactgcttggagaacgtcgacaaagccctg
cagttcctgaaagagcagcgggtgcatctcgaaaacatggggtcccacgatatcgtggac
gggaaccacagactcaccctcggccttatttggactattatattgaggttccagatccaa
gacatcagtgttgaaacagaagacaacaaagagaagaagtctgcaaaagatgcactgcta
ctgtggtgccagatgaagacagccggctatcccaacgtcaacattcacaacttcaccacc
agctggagggacggcatggctttcaacgcgctaatccataaacacaggcccgacctaatt
gattttgataagctgaagaaatcgaatgcacactacaatctgcagaacgcttttaacctg
gcagagcagcaccttggccttactaaactcctggacccggaagatatcagtgttgaccac
cctgatgaaaagtccatcatcacctacgttgtgacatattaccactacttcagcaagatg
aaagctttagccgtggaaggaaagcgcattggaaaggtgcttgacaacgccatcgaaaca
gagaagatgattgagaagtacgagtcgctggcttccgacctcctcgagtggattgagcaa
accatcatcatcctgaacaaccgcaagtttgccaactccctggttggggtgcagcaacag
ctccaggcattcaacacctaccgcacagtggagaagccacccaaattcacagaaaaagga
aacttggaagttctgctcttcaccatccaaagcaaaatgagggctaataatcagaaagtg
tacatgcccagggaagggaaactcatctcagatatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgtaacgagctcatccgacaggagaaactg
gaacaactcgcccgcagattcgaccgcaaggcagctatgagggagacgtggttgagcgaa
aaccagcgtctggtttctcaggacaactttgggtttgacctccccgctgtggaggctgcc
acgaagaagcacgaagccatcgagacggacattgccgcgtacgaggaaagggtccaggcg
gtggttgctgtggccaaggagctggaggctgagaactaccacgacatcaaacgcatcacg
gccaggaaagacaacgtcttccgcctatgggagtacctcctggagctgctcagggcacgc
aggcaacggctggagatgaaccttggtctgcagaagatattccaggagatgctgtacatc
atggactggatggatgagatgaaggtgttgttgctgtctcaagactatggcaagcatctc
ctcggagtggaagacctattgcagaaacacacacttgtcgaggctgacatctccattcag
gccgagagagtgagaggggtcaatgcgtcagcccaaaaatttgccacagacggagaaggt
tacaagccttgcgacccgcaggttatccgagaccgagtggctcacatggagttctgctac
caggagctgtgtcagttagcggccgagcgccgagctcgcttggaagagtcccggcgcctc
tggaagttcttctgggagatggctgaagaggagggctggatcagggaaaaagagcagatc
ttgtcgtcggatgattacggaaaagacttgaccagcatcgtccgccttctcagcaagcat
aaggcgtttgaggacgagatgagtggtcggagcagccacttccaacaggccatcaaggaa
ggcgaggacatgatagccgaggatcactttgggtcagagaagatcagagagaggatcgcg
gacatcaagaaccagtgggccaatctggagcaactctccaccatccggaagaagcgactg
gaagaagcttccctcctccaccagttccaggcagatgccgatgatatcgacgcgtggatg
ttggacatcctcaagattgtctccagcagtgacgtgggccacgacgagtattccactcag
tccttggtgaagaaacacaaagatgtggcagaggagatcgcaagctacaggtccatcatg
gattccctgcacgaacaggccggagccttgccgcgggagcacgcggagtcgacagatgtc
cagagcaggctgtccggaatggaagaaaggtacaaggaggttgctgagctcacgcggctt
cgtaaacaggccctgcaggacaccttggccctgtacaagatgctcagcgaagcggatgcc
tgcgagctttggatcgacgagaaggaacagtggctgatcaacatggagatccctgagaaa
ctggaagacttggaggtgatccagcacagatttgaaagcttagagccggaaatgaacaat
caggcgtcacgggttgctgtggtgaaccagattgcaaggcagctaatccacaatggccat
ccgggcgagaaggaaatcaaggcgcagcaagataagctcaacacaaggtggagccagttc
agagagcttgttgacgtgaagaaagaggccctgctctcagccctcagtatccagaactac
caccttgaatgcaacgaaaccaagtcgtggatcagggagaagacaaaggtcattgaatcc
acccaagagcttgggaacgacctagccggtgttatcgctcttcagaggaagctgactggg
atggagcgcgatttggtcgccatcgaggccaagttaagcgacctgcagaaagaagccgaa
aagttggaatcggagcaccccgaccaagctcgggccatcctgtcgaggctcgctgaaatc
aacgacgtttgggaagagatgaagacgaccttgaagaaccgcgaagagtcccttggggag
gccagcaagttgcagcagtttctgcgcgacctggacgacttccagtcttggctgtcccgg
acccagacggccatcgcctcggaagacatgccgaacacgctgacggaggctgagaagctg
ctcacgcagcatgagaacatcaagaacgagatcgacaattacgaagaggactatcagaag
atgagagacatgggcgagatggtgactcaagggcagacggatgctcagtacatgttcctg
caccagcgcctgcaggccttggacactggatggaacgagctgcacaagatgtgggaaaac
cggcagaaccttctctcccagtcccatgcctatcagctgttcctgagagacacaaagcaa
gcagaagccttccttaacaaccaggaatatgttttggcacacactgaaatgcccaccact
ttggagggggcagaagctgccatcaaaaaacaggaggatttcatgaccacaatggatgcc
aacgaggagaagatcaacgcagttgtagagaccggaaggaggctggttagcgatggcaac
atcaactctgacaagatccaagagaaagtggactccattgatgacaggcataagaagaac
cgggaggtggccagcgagcttctgatgagattaaaagacaacagagatcttcaaaagttt
cttcaggattgccaagagctgtcgctctggattaatgagaagatgcttacagcgcaggac
atgtcttatgatgaagcgaggaacctgcacagcaaatggttgaaacaccaggccttcatg
gcagagcttggttccaataaagagtggcttgacaaaattgaaaaggaagggatgcagctc
atcgctgagaaacccgaaacggagggtatcgtgaaagagaagctgacgagcctgcaccat
atgtgggaagtgcttgaaaacaccacccagacgaaagcccagcggctttttgatgccaac
aaggctgagctgttcacccagagctgcgctgacttggataagtggctgaatggcttggaa
agccagattcagtcagacgactacggcaaggacctcaccagcgtcaatattctgctgaag
aagcaacagatgcttgagaaccaaatggacgttcgtaagaaggagattgaggagctgcag
agccaggcccaggcgctgagccaggagggcaagagcgccgacgaagttgacagcaaacgc
ttcatcgtggagaagaagttcgtggagctgctggaacccttgaccgagaggaaggcccat
cttctggcctccaaggagatccaccagttcaaccgggatgtggaggacgaaattttgtgg
gttggagagaggatgcccattgccacatcgacagatcatggtcacaacctccagactgta
cagttgctcattaagaagaatcagacacttcagaaggaaatccaggggcaccagcctcgc
atcgacgacattttcgagaggagccaaaacatcattacagacagcagccttaatgccgaa
gcaatccagcagcggctggcagacttgcagcagctgtggagcctcctgatagaggagacg
gagaaacgccacaagcgccttgaggagtcccacaaagcccagcaatactactttgacgcc
gcggaggccgaagcctggatgagcgaacaggaactctacatgatgtcagaagagaaggcc
aaggatgaacaaagtgcagtttccatgttgaagaaacaccagattttggagcaggccgta
gaagactatgctgagaccgtgcaccagctatccaagactagcaggactttggtggcagac
aatcatccagagagtgagcgcattagcatgcggcagtccaaagtagacaagctctacgca
ggcctgaaagaccttgctgaggagaggagaggcaagctcgacgagagacacaggcttttc
cagttgaaccgcgaagtggatgacttggagcaatggattgccgaaagggaagtggtggcc
ggatcccacgagctgggacaggattacgaacatgtgacaatgttgcaagagcggttccgc
gaatttgcccgggacaccggcaacattgggcaggagcgcgtggacaccgtcaaccacatg
gccgacgagctcatcaactccggacattctgacgccgccaccatcgccgagtggaaggac
ggtctcaacgaggcctgggctgacctcctggaactcatcgacaccagaacgcagatcctg
gccgcctcttatgaactgcacaaattttaccacgatgccaaggagatctttgggcggata
caggacaaacacaagaagcttcccgaggagcttgggagggaccagaacacggtggaaacc
ttgcagaggatgcacaccacattcgaacacgacattcaggccttagggacacaggtaagg
caactgcaagaagatgccgcccgcctccagtctgcttatgctggagacaaggccgacgat
atccaaaggcgtgaaaatgaggttctggaagcgtggaagaccttgctcgatgcctgcgaa
ggacgcagggtcaggctggtagacaccggggacaaattccgcttcttcagcatggtccga
gatctcatgctttggatggaggatgtcattcgtcagatcgaagcccaagagaagcctagg
gatgtttcctccgtagaactgctgatgaacaatcaccagggaatcaaagcagaaatagat
gcccgtaatgacagctttacaacttgcattgagctgggcaaatcgttgctggcgaggaaa
cactatgcttcagaagagatcaaggaaaagctattgcagctcacagagaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaagtgcaccag
ttttcgagggacgccagcgttgccgaggcctggctgctggggcaggagccatacctgtcg
agccgcgagatcggccaaagcgtggacgaagtggagaagctcatcaagaggcacgaagcg
tttgagaagtctgccgcaacttgggacgagagattttcggcgcttgaaagacttactacg
ttggaattgttggaagtacgtcgacagcaagaagaggaagagaggaagaggcagcctcct
tctccggagccaagccccaagaccggagaggagtctcagcaatgggacggcacaaaagga
gagcaggtatcccagaatggtttgccaccagaccaggaatctcctcggatgggagagtcg
agggaagccaacgaaatggtcaatggagcagcggaccagaggacaagctccaaagagacc
agtcccgtcccgtcgccgacggccgatcgcaaagccaaggctggcctccaggcccagaca
gccgccaccctcccggccaaaacgcaagaagccccttccactctgatggagggcttcttg
catcgcaaacacgaatgggagtcacacaacaagaaggcttcaaacagatcctggcataac
gtctactgtgtcattaacaagcaagacatgggcttttacaaagatgccaaggctgcttcc
tcaggcatcccctaccacaacgagatccccgtcagcctgaaagaagcggcatgcgaagtg
gcggttgaatacaagaagaaaaagcatgtgttcaagctaaggttaactgacggcaatgag
tacctcttccaagccaaagacgatgaggaaatgaacgcatggatccaggccattgcctct
gcgatttcggacaaagccgagttgtccacaagcacacacagcaccccagcgacgagccgc
gcccagaccctgccagccagtgtgacaataaccagcgagtccagtcctggcaagcgggag
aaagagaaagagaaagacaaagagaagagattcagccttttcgggaaaaagaagtga
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integrated database retrieval system
