Podarcis raffonei (Aeolian wall lizard): 128411364
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Entry
128411364 CDS
T09310
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128411364 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128411364 (PNPT1)
03016 Transfer RNA biogenesis [BR:
praf03016
]
128411364 (PNPT1)
Enzymes [BR:
praf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
128411364 (PNPT1)
Messenger RNA biogenesis [BR:
praf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
128411364 (PNPT1)
Transfer RNA biogenesis [BR:
praf03016
]
Prokaryotic type
tRNA degradation factors
128411364 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
128411364
NCBI-ProteinID:
XP_053239638
LinkDB
All DBs
Position
3:complement(113313536..113354060)
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AA seq
793 aa
AA seq
DB search
MAAASAVCLSWLRRRASACRGSGAMGPWLRGPGCLRLARLARARGLWSSAGGPKAVSVDV
GGRKLEISSGKLARFADGCAVVQLGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGR
IPTNYLRRELSSTDKEILTSRVIDRSIRPLFPAGYYYDTQILCNLLAVDGVNDPAVLAIN
GASAALALSDIPWNGPIGAVRVGLIDGEVVVNPTRKEMSSSTLDLVVSGAPRSQIVMLEA
AAENVLQQDFCHAIKVGVKHTQQIIQGIQQLAKEQGVAKRTVQKLFTAPEQIVECAKHLA
SGKITAVFSDFTHDKISRDEAINKIRLETEEQLKEKFPEAECYEIMESFNVVLKEVFRNL
VLNEYRRCDGRDLTSLRDITCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSVKSDVI
TTALSGIKEKNFMLHYEFPPYATNEIGKITGMNRRELGHGALAEKALKPVIPSEFPFTIR
VTSEVLESNGSSSMASACGGSLALMDAGVPISSPVAGVAVGLVSRANSEKNGDIEDYRLL
TDILGIEDYHGDMDFKMAGTNKGITALQADIKLPGIPLKIVMEAIQQATVAKREILQIMN
KTIAKPRASRKENGPLVENVQVPLSKRARFVGPGGYNLKKLQAETGVTVSQIDEETFSVF
APTPSAMHEAREFITEICKDDQDYQLEFGAIYTATITELRDIGVMVKLYPNMTPVLLHNS
QLDQRKIKHPSALGLEVGQEIQVKYFGRDPTDGRMRLSRKVLQSPATTVVKTLSDKSNIV
VGGPIPEPASSTS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccagcgcagtctgcctttcgtggctgaggcggagggcgagcgcttgccgg
ggtagcggcgccatggggccctggctgaggggtccgggctgcctccgcctggcgcggctg
gctcgggctcgaggcctctggagctctgctggaggccccaaagcggtgtctgtggacgtg
gggggcagaaaattagaaatctcttctggaaaattagcccgattcgctgacggatgtgct
gtagtacagctaggtgatacttcagtgatggtgacagcggtcagtaaaacgaagccttct
ccatctcagttcatgcctttggtggttgactatcgacaaaaagctgctgcagcaggaaga
attcctaccaattatctgagaagagaactgagctctaccgataaagaaattcttacaagc
agagtaatagatcggtccattagaccactctttccagcaggctactattatgatacacag
atcctttgtaatcttttggctgtagatggtgtcaacgatcctgcggtgctggccatcaat
ggagcttccgcagcccttgctttgtcggatattccatggaacggtcccattggtgctgtg
agggtaggactgattgacggcgaagttgttgtgaatcccacacgaaaagaaatgtcttcc
agcacgttggatttagtggtctctggagcccctcgtagccaaattgtgatgttggaagct
gctgccgagaacgtattgcaacaggacttttgccatgctatcaaagtgggcgtgaagcac
acccagcaaataattcaaggcatacaacagctggcaaaggaacagggcgttgccaagaga
accgtgcagaagctattcactgctcctgagcagattgtggaatgtgcaaagcaccttgca
tctggaaagatcactgctgtgttttccgacttcacgcatgataaaatctcaagagatgaa
gcaattaacaaaatcagacttgaaacagaagagcagctgaaagaaaagttcccggaagcg
gagtgttatgaaatcatggaatcttttaacgtcgtcttgaaggaagtctttagaaatctt
gttctgaatgaatacaggagatgtgatggtcgagacttgacttcacttagagacatcact
tgcgaggtggacatgttcaaaacccttcacggatcagcgttatttcagagaggccaaacc
caggtcctctgcacagttacatttgactcactggaatcaagtgtaaaatctgacgttatc
acaacagctttaagtggaataaaggagaagaacttcatgctccactacgagtttcctcca
tacgcaactaacgagattggcaaaattactggcatgaatagaagagagcttggccatggt
gcacttgcagaaaaggctttgaagcctgtgattcccagtgaattccctttcacaataagg
gttacttcagaagtactggagtcaaatggatcatcgtcaatggcttctgcttgtggtggg
agtttggcactgatggatgcaggagtcccaatatcgtctcctgtcgcaggtgttgctgtt
ggtttggtttccagggctaattctgaaaaaaatggagacattgaggattatcgcttgcta
acagacattctgggaatagaggattatcatggtgatatggacttcaaaatggctggaacg
aataaaggaatcactgccttacaggctgatatcaaactaccagggatacccctaaaaatt
gtgatggaagcgattcagcaagccacagtggcaaagagagaaatattgcaaattatgaac
aaaacgattgcaaaacctagagcaagcagaaaagagaacggaccacttgtagaaaatgtt
caggtgccattatcaaaaagggcgagatttgttggccctggtggttataatttaaaaaaa
cttcaagctgaaactggggtaaccgttagccaaatagacgaagagaccttttccgtattt
gctccaacgccgtctgctatgcatgaagcacgagaatttattaccgaaatctgcaaagat
gatcaggactatcagttggaattcggagctatttatacagccacaataacagaactgaga
gatattggggtgatggtaaaattgtacccaaacatgactcccgttctacttcacaactct
cagctggatcaaagaaagattaaacatcctagtgctcttggattagaagttggtcaagaa
atccaggtgaaatattttgggcgtgatcctactgacggcagaatgaggctttcgaggaaa
gtgcttcagtctccagctacaacagtggttaaaacactcagtgacaagagcaatatagtc
gtgggaggtcccattccagagcctgctagttcaacatcgtag
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