Podarcis raffonei (Aeolian wall lizard): 128411443
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Entry
128411443 CDS
T09310
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128411443 (HMBOX1)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128411443 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
CUT
HTH_24
DUF494
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
128411443
NCBI-ProteinID:
XP_053239726
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All DBs
Position
3:complement(120128291..120252468)
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AA seq
488 aa
AA seq
DB search
MLRTFPVVLLETMFHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETFDRLDQEHSDK
FGRRSAYGAGGGSCSNSTNNVAASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNG
RESSERLSAFNGKMSPTRYPLASSMAQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEI
KAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLS
MRPAPIPVEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKR
EEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGKLHLALPPLKTSV
VAGEIPSPATRRSEGALEAAILESHGIDVQSPGGHSNSDDIDGNDYSEQDTWQVRNGEEE
GRCSEGGREAEKLEEDRRICSKQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGTSEI
KTEALDDD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaacctttccagtggtcctgctggaaaccatgtttcactacaccgacgagccc
cggttcaccatagagcagatcgacctgcttcagcgcttgcggcgcaccgggatgacgcgg
cacgagatcctgcacgccctggagaccttcgaccgcctcgaccaggagcacagcgacaag
ttcggccggcgctcggcctacggggccggcggcggctcctgcagcaacagcaccaacaac
gtggccgcctcgtcctccaccgccacggcctccacgcagacgcagcactcgggaatgtcc
ccctcgcccagcaacagctacgacacctccccgcagccctgcaccaccaaccagaacggc
cgggagagcagcgagcggctgtccgccttcaacgggaagatgtcgcccacgcggtacccg
ctggccagcagcatggcgcagaggtcgtacagcttcgaggcctccgaagaagacctggac
gtggacgacaaggtggaggagctgatgaggagggacagcagcgtgataaaagaggaaatc
aaagccttcctggccaaccggaggatttcgcaagccgtcgtagcgcaggtaacaggtatc
agtcagagccggatctcccactggctgttgcaacagggatcggacctgagcgagcaaaag
aaaagggccttttaccgatggtaccagcttgagaagacaaaccccggggcgacgttaagc
atgaggccggccccgatcccggtagaagaacctgaatggaggcagactcctccccccgtc
acagctacctctggcaccttccgcttacggcggggaagtcggttcacctggcggaaggag
tgcttggccgtcatggaaagctacttcaatgagaatcagtatccggatgaggccaagagg
gaagaaatcgcaaatgcctgtaatgcggtgattcagaaaccaggaaagaaactgtccgac
ttggagcgagtcacttctctcaaagtgtacaactggttcgccaaccggaggaaggaaatc
aagaggagagctaacattggaaaacttcaccttgctcttcctcctttgaaaacatccgta
gtggcaggcgagattccttcacctgcaacccggaggagtgagggagcgttagaagcagca
atcctggagagtcatggcatagatgttcaaagtcccggcggccactccaacagtgatgac
atagacggaaatgactattcggagcaggacacttggcaagtgcgcaatggggaggaggag
ggccgatgttcagagggaggcagagaagcagagaagttagaagaagacaggaggatctgc
tcaaaacaagatgacagcactagtcatagcgaccaccaagaccctatctcactagccgtg
gagatggcggccgtgaatcacaccatcctggcgttggcccggcaaggaaccagcgagatc
aaaacagaggccctggacgacgactga
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