Podarcis raffonei (Aeolian wall lizard): 128411539
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Entry
128411539 CDS
T09310
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128411539 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128411539 (TRIM54)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128411539 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
CoiA_N
TRIM_CC
Sina_RING
DUF5799
RHH_9
Prok-RING_4
CagA
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
128411539
NCBI-ProteinID:
XP_053239926
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All DBs
Position
3:complement(124375288..124401098)
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AA seq
387 aa
AA seq
DB search
MNFAVGFKPLLGTSQSMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQQLMCEEHEEEKINIYCLTCEVPTCSMCKVFGAHKDCEVAPLTNIYKRQKGELSDGIAM
LVAGNDRIQAIITQMEEICKTIEDNARRQKQHLCLRFDSLYSILEERKKELLLEIGREQD
DKLQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMAVYLQQAKELIKKITDMSKVSMSS
HPEPGYESMDHFTVNIDHVAEMLRTIEFQTDAAGEDAEQEGLGPEGGLEAEEGEHLEGTD
APEGTEDGENLPRLRPKPASASHAGQH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggcttcaagccgctgttggggacttcgcagagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagccggtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacatcttccaggcctccaaccct
ctctggcagtcgcgcggctccacgtcggtgtcctcaggaggtcggttccggtgcccatcc
tgccggcatgaagtggtgctggaccggcatggcgtttatgggctgcagcgcaacctcctc
gtggaaaacatcattgacatctacaagcaggaatcctctcgacccctccatgccaaggcg
gagcagcagctgatgtgtgaggagcatgaggaggagaagatcaacatctactgcctcacc
tgcgaggtccccacctgctccatgtgcaaagtctttggggcccacaaggactgcgaagtg
gcccctctgaccaacatctacaagcgccagaagggggagctgagcgatggcatcgccatg
ctggtggctgggaacgaccggatccaggccatcatcacccagatggaggagatctgcaaa
accattgaggacaacgcccggcggcagaagcagcacctctgcctgcgctttgactccttg
tacagcatcctggaagagcgcaagaaggagcttctgctggagatcgggcgggagcaggac
gacaagctccagcgggtgcggggcctgatccgccagtatggggaccaccttgaggtctcc
tccaagctggtggagtcggccatccagtccatggaggagccccagatggctgtctacctc
cagcaggcaaaggagctgatcaaaaaaatcacagacatgtccaaagtctccatgagcagc
cacccagagcctggctatgaaagcatggaccacttcacggtcaacatcgaccacgtggcg
gaaatgctgaggacaattgaattccagacagatgctgctggagaggacgcggagcaggag
ggtcttggcccagaggggggcctggaggcagaagagggagaacatctggaggggacagat
gcccccgaggggacggaagatggagagaacctgccccggctgaggccaaagccagcgagt
gcctctcatgcaggtcagcactga
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integrated database retrieval system
