Podarcis raffonei (Aeolian wall lizard): 128411971
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Entry
128411971 CDS
T09310
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128411971 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128411971 (LMO7)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128411971 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_2
PDZ_6
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
128411971
NCBI-ProteinID:
XP_053240614
LinkDB
All DBs
Position
4:complement(98221075..98367086)
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AA seq
1748 aa
AA seq
DB search
MESREDAEGAGGGGGGEGAFAEARRWVEAATGKSFGKNDFRAALENGVLLCDLINKIKPG
IIRKINRLSTPIAGLDNINVFLKACENLGLKEAQLFHPGDLQDLSNRVTVKPEETNRRVK
NVLITLYWLGRKAHSNPYYNGPQLNLKAFEKLLGQALTKALGESSSPKRSGRDSGYGDIW
YIERSDSLSSSISHKRDDSFDSLDSFGSRSSASFSSDVTLKGGSEDCESDTDSETRARMH
DPSKDDMSYRRVSLIEPKPAAEFNRFLPSKAKPPTYMPAPLRKRRTEKNEDNRRSWASPV
FTEPDGTFSSNQRRALQREMECHTSANVLSGFSNYLEEEYEEEKTMGTPDIETDDLYVRK
INAAVSNLKLSSHKFLPKSWIPGEELQWKKAKRISFSKQWYKDIQGFSKSADSEEDLARV
QTSNSLSNLGNSCREDSNGIKQTAEGAAKSVLQAAEENVNCSSDLPSQFLFLRALQKYSD
DYLSSETRTKIDPSSGPRLISCRKKNYFRPGCDQRDNENGDNYPDLENDDLFVRKTGASH
MNPVILQGFQYLNQGPQIEGEIVLQPRDDETAIPDLEKDDLTVRKAQFQKKEVPLSGAPD
RYWPALFPDPWSLPPEIQAKFLCLLEKTTTKDERPSGGKILSPSSRQKKDDMLTRKMELL
NVGVNVQPISFSPGTCSKEDMEKWEAIREASKIRHKKRQMVERLFQKITDEHGSKSLNDV
SADELQTIRQLRYEELQRIRTQLQEQDEQWQDDLAKWKSRRKSHTSDLQKKKEEREEIER
RTSESSERRGKSLREMQRDREGRDQGLYSSAEHRAENRRMYLSNDDVFSGEQISSRPSKE
HLVENDAAGSLKNEENSQESNKGTESYARIESQAPPKSVAEEKHQPPLSTYHSVNAPIGS
ARVSASLPRSYQKTDTARLTSVVTPRPFGVHSRGISSLPRSFTMDDAPKYNGEVDVSKRT
QYAFTSNSLSKPEAGQSQSISDLRSAEDKTWTRYSSAEDKTKTRQSPTENAAIASESADV
NHLVPKSEHHTTHDSTAAGSSAAEQTSHPDTEVSRAQDQYSDMRISINQRPGSSRSFGFA
VHQDPSGVFVKSIEEGSPADFCQLNVEDEILTLNGTKVSGMDQSQWEAAIGSSLETGNLV
MDVRRYGKKDWGKDQPSLPYARHKILNLTSMATNIIGTPENKWIDATSADSTSAKSQSIS
AQKDLHNNFQNDDSETKVNGMQGDANSNEKKDTEPISLKNLKRRSQFFEQGSSGFSYNSW
VYLCGGPEPAIPDLPVPPISASSRWAWDQEEERKRQEKWQAEQDRLLQEKYRREQERLKE
EWLKAQKEAEKENSKYLNEEETVLKPNTVSVTAQEPPVSTWRANGDHKADYSEAGRRWEE
EREQEKKEEERKRFEEAQRLEEAATALRIEQERKRQELEREKERNVCYAEEPRYQEAAEQ
KLQVEQVKETSIQRPQYQRHFETPRNSDEPTGYFSTNRSKSRSTPDLDDHHANRNGMKSK
LSEQSSNAGDSQKRSQKEHGLSPAELERQQILQEMRKKTSLHTDNSWIRQRSSSMHKEPV
SLIGTRMRRGESLDNLDSSRTNSRRPHSWMGQSGSSLSLSSSQDFSHHVPPVVSTSNRAY
MRIPSSSLPSPSASSTKTSSLPHVLPSAQSPAPHSQSPTSASQTGTQQRSRSVSGKRVCS
YCRNVLGKGAAMIIESLGLCYHLHCFKCNACGCDLGGSQAGTEVRIRNNELFCNDCYLRF
KTGQPTVM
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagagaggatgccgagggcgccggcggcggcggcggtggcgagggcgccttt
gccgaagctcgccgctgggtggaggcagctactgggaaaagttttggaaagaacgacttc
cgtgctgccttggaaaatggagtcctcctgtgtgatctaattaacaagatcaaacctggc
atcattagaaagattaatcgtctgtcaacaccaatagctggtctggataatataaatgtg
tttttgaaagcttgtgaaaatcttggattaaaagaagctcagctttttcatcctggtgac
cttcaagatctttctaatcgagttactgtcaaaccagaagagactaacagaagagtgaaa
aatgttttgattacattatattggttgggcaggaaagcgcacagcaacccttactataat
ggcccacagctaaatttaaaagcctttgagaaattactaggacaagccttgacaaaggct
cttggagaatccagcagtcccaaacgaagtggaagggatagcggatacggagatatttgg
tatattgaacgcagtgactcactttcgtcatctatcagccataagagagacgattccttt
gatagcttggactcctttggctcaagatcttctgcaagcttttcatcagacgtaactttg
aaaggtggcagtgaagattgtgaaagtgacacagattctgaaacacgcgcaagaatgcat
gatcccagtaaagatgacatgtcgtaccgcagagtttctttgattgaacccaagcctgct
gcagagttcaatcgtttcttacccagcaaagctaaaccaccaacatacatgccagcgccc
ttgaggaagagaagaacagagaagaatgaggataacagaagaagctgggcaagtcctgtg
tttacggagccagatggaacattttcaagtaaccagagaagagctttgcagcgagagatg
gaatgccatacatcagctaacgttctttcaggcttctccaactatttggaggaggagtat
gaagaagaaaagacaatgggcactccagacatcgaaacagatgacctttatgttcgcaaa
ataaatgctgcagtgtcaaacctaaaactttcctctcataagtttcttcccaagtcttgg
attccaggggaagaattgcagtggaaaaaagcgaaaaggatatctttttccaagcaatgg
tataaggatattcaaggattcagtaaaagtgcagattctgaagaggatcttgcaagagtc
cagacaagcaatagcctgagtaacttgggtaacagttgcagagaagactcaaacggcatt
aaacagactgcggaaggtgctgcaaaatcagtactacaagctgcagaagaaaatgttaac
tgttcctctgatctaccaagtcagtttttatttctgcgggcactgcaaaaatattctgac
gactacctgtcctctgaaactagaaccaaaattgatccttcttcagggcctaggctcata
tcttgcaggaaaaaaaattattttaggcctggatgtgaccaaagggacaatgaaaatgga
gacaattatccagatttggaaaatgatgatttgttcgttcgtaagactggtgcttcccat
atgaatccggtaatcctccaaggttttcagtatcttaatcaaggtcctcagatagaagga
gagatcgttctgcaacccagagacgatgaaactgcaattccagatttggaaaaggatgat
ttgacagttcgcaaagctcagtttcagaagaaagaagtgcccttatcaggtgccccagat
agatactggcctgctctctttccggatccttggagtcttccaccagaaatccaggccaaa
tttctttgtttgcttgagaagacaacaacaaaggatgagagaccaagtggtggaaagatt
ttatctccttcttcgcggcaaaagaaggatgatatgttgacccgcaagatggaactgctc
aacgtaggagtcaatgtgcagcccattagtttctctccaggaacatgcagcaaagaagac
atggaaaaatgggaggcaatcagagaggccagcaaaatcagacacaagaaaaggcaaatg
gttgaaaggctgtttcaaaagattactgatgagcatgggagcaaatccttgaatgatgtc
agtgcagacgagctccaaacgatccgtcagttgcgttatgaggagcttcagagaataagg
actcagctacaagaacaagatgaacaatggcaagacgatttggcaaaatggaaaagccgt
cgtaagagccacacttctgatttgcaaaagaaaaaggaggagagagaagaaattgagcgg
agaacttctgagagttccgaaagacgcggcaaatctctgagagaaatgcagagggacagg
gagggcagagatcaagggctctatagcagcgctgagcatcgagcggaaaacaggcgaatg
tatttgtcaaacgacgatgtgtttagtggagagcaaatttcttcaaggccttcaaaagag
caccttgttgaaaacgatgctgccggctccttgaagaatgaggaaaacagtcaagagagc
aataagggaacggagagctatgcaagaatcgaatctcaagctccacctaagagtgtagca
gaagaaaagcaccagccccctttgtcaacatatcattcagtaaatgcaccaattgggtca
gctcgggtttcagcttctctcccaagaagttaccagaaaaccgatacggccagactaacg
tctgtggttacacctaggccctttggtgtccattcgagaggaatctcatcacttcctagg
tcatttacgatggatgacgccccaaaatataatggagaagtagatgtgtccaagagaact
cagtatgcattcaccagcaattcactttctaagccagaagctggacaaagccaatctata
agtgacctaagaagtgctgaggacaagacttggacaagatactcatctgctgaggacaag
acaaagacaagacaatcgcctacagagaatgctgccattgcgagcgaaagtgcagatgtt
aatcacttggtccctaaatcagagcatcatactacccatgactcaactgcagctgggtct
tcagcagcagaacaaacaagccacccagatactgaggtttcaagagcacaagaccagtac
agtgatatgagaatcagtataaaccagagaccaggtagcagtcggagttttgggtttgca
gtgcaccaggatccttctggagtcttcgtgaagtcaatagaagaaggtagcccagcagac
ttttgccagttgaatgttgaggatgaaatccttactctcaatggcacaaaggtttcaggt
atggaccagagtcagtgggaagcagccatcggcagctcactagaaactggaaaccttgtc
atggatgttaggcgatacggcaagaaggactggggcaaagaccagccttccctgccatat
gcaaggcacaaaatcctcaatctcaccagtatggctaccaacattataggtacacctgag
aacaaatggattgatgcgacatctgcggacagcacttcagccaaaagtcaaagcatatca
gcacaaaaagacttgcacaacaattttcaaaatgatgattcagaaacaaaggtcaatggg
atgcaaggagacgcaaattccaatgagaaaaaagacacagaacccatttctttgaaaaac
ttaaaaaggcgatcacagttttttgaacaagggtcatcaggtttttcttacaattcatgg
gtctacctttgtggaggcccagagcctgccattcctgatctcccagttccgcccatcagc
gcttctagccgctgggcctgggatcaagaggaagaaagaaaaagacaagagaaatggcaa
gcagaacaggatcgcttacttcaggagaaatacaggcgcgaacaagagagactgaaggaa
gaatggctgaaagctcagaaagaggctgaaaaggagaactccaaatacttaaatgaggag
gagactgtattaaagccaaatactgtgtctgtaactgcacaagaacctcctgtttccacg
tggagagcaaatggagatcacaaggctgactattctgaggctggtagacgatgggaagaa
gagcgagaacaggagaagaaggaagaggaaaggaaacgttttgaggaggcccagaggctg
gaagaagcagcaactgcgttacgaatagaacaagagaggaagcgccaagaactagaacgt
gagaaggaacgaaacgtgtgctatgcagaggagccgaggtatcaggaagcagcagaacag
aaattgcaggttgaacaagtcaaggaaacttcgatacagaggccccaatatcaaaggcat
tttgaaacaccaagaaattctgatgaaccaacaggctacttcagtactaacagaagtaaa
tccagatcaactccagatctagatgatcatcatgcaaatagaaatggcatgaagagcaaa
ctttccgagcagtcctcaaatgctggtgactcacagaagagatctcagaaagagcatggc
ttgtccccagctgagctggaaagacagcagatccttcaggaaatgagaaagaagacatcc
ctacacacagacaacagctggatcagacaacgcagttccagtatgcacaaagagcctgtt
agtctaattggcactagaatgaggagaggtgagagtttggataaccttgattcttcaaga
acaaattcccggaggcctcactcttggatgggccagtctggatcttcactgtctttatca
tctagtcaagattttagtcaccatgtgcctcctgtagtgtccacttcaaatcgtgcctac
atgcgcataccctcttccagcctgccatctccttcggccagttccacgaaaacatcatcc
ttgcctcatgttcttccatctgcgcaatctcctgctccccattctcagtcaccaacttct
gcttcccagactggaactcagcaacgcagcaggtcggtcagtggaaagcgagtgtgctca
tactgtagaaacgttctgggcaaaggagcagccatgatcatcgaatctcttggtctttgc
tatcatttacattgttttaagtgcaatgcttgcgggtgcgaccttgggggctctcaggcc
ggaactgaagtccggatccgaaacaatgaactcttctgcaatgactgctatctcagattt
aagactggacagccaaccgttatgtga
DBGET
integrated database retrieval system
