Podarcis raffonei (Aeolian wall lizard): 128411999 Help Entry 128411999         CDS       T09310                                  Symbol PCDH9 Name (RefSeq) protocadherin-9 isoform X1   KO K16498   protocadherin delta 1 Organism praf  Podarcis raffonei (Aeolian wall lizard) Pathway praf03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:praf00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     128411999 (PCDH9)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:praf01009]     128411999 (PCDH9)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:praf04515]     128411999 (PCDH9) Protein phosphatases and associated proteins [BR:praf01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      128411999 (PCDH9) Cell adhesion molecules [BR:praf04515]  Cadherins   Protocadherins    128411999 (PCDH9) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 MAP17 V_ATPase_I EphA2_TM RCR DUF6249 Big_9 7tm_3 DUF6377 Motif Other DBs NCBI-GeneID:  128411999 NCBI-ProteinID:  XP_053240670 LinkDB All DBs Position 4:101948137..102701162 Genome browser AA seq 1249 aa AA seqDB search MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDRERLCAGAAYAEENECFFELEVVILPN DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREHKDTYVMKIKVEDGGTPQKSSTAILQV TVSDVNDNRPVFKESQMEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK RLFALNNTTGLVTVQRALDREETAIHKVTVLASDGSSTPARATVSINVTDVNDNPPNIDL RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG NNKGLFRIDPVTGNITLEEKPTPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPEDAVHEPI NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQALNFGDMP KYLWEIWVPDKPWVSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDE FYDQASPDKRTEADGNSDPNSGFKECMKAQTGTGISVSHVAVYMSDGPLGPRGLAEATEM CTQECLVLGHSDNCWMPPSLGSYQQPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSN RNQFSDRKQFGSGEGHFNPGNAMADIPLANLKSYKQASGPVESPKENQL NT seq 3750 nt NT seq  +upstreamnt  +downstreamnt atggacctgagggatttttacctgttggctgccctgattgcctgtttaaggctggattct gctgtggctcaagaacttatttacaccatccgagaggagctaccggaaaacgtccccatt gggaacataccaaaggatctgaacatttctcacatcaatgccgccacaggaaccagcgct agtcttgtctacagactggtctccaaagcaggggatgcccctttggtgaaagtgtccagc accacaggggagatctttaccacctccaacagaatcgacagagagagactctgtgcagga gctgcctatgctgaagagaatgagtgcttctttgagctggaggtggtgattctcccaaac gacttctttcggctgatcaagatcaaaataattgtgaaggataccaatgacaatgccccc atgtttccctcccctgtcatcaacatctccatacctgaaaacactctgatcaacagccgc tttccgatcccgtcagccacagaccccgacactggtttcaatggggtgcagcactatgaa cttttgaatgggcaaagtgtctttgggctggatatcgtggaaactccagaaggggagaag tggcctcagctgattgtgcagcagaacttggacagggagcacaaagatacctatgtgatg aaaatcaaagtcgaggatggaggaaccccccagaaatccagcacagctatcctccaggtc acagtaagtgatgtcaatgacaacaggccggtttttaaagagagtcagatggaggttcac ataccagagaatgcccctgtaggtacctcggtcattcagctgcatgccacagacgcagat ataggaagcaatgcggaaatcagatatatttttggtgcccaggttgctcctgcaactaaa agactctttgctttaaacaacacaactgggctggtgacagttcagagggccttagaccga gaggaaactgccatccacaaggtgacggtgctggccagtgatggtagctctacacctgcc cgggcaactgtttccatcaatgtgactgatgttaacgataacccccctaacatagacctc aggtacattataagtcccatcaatggcacagtgtacttatctgagaaagaccccatcaat accaagattgccctaattacggtctcagataaggatactgatgtgaatggcaaagtgatc tgtttcattgagagagaagtgccgttccacttgaaggctgtttatgacaaccagtacttg ttagagacctcttccttgctggactatgagggcaccaaagaattcagctttaaaatagtt gcctccgattctggcaagcccagtttgaaccagaccgccctagtaagagttaagctggaa gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtccgtttccgaa aacaaccgccgtggtctgtacttaacaactattagtgccacagatgaggacagtgggaaa aatgcagacattgtttatcagcttggccccaacgcctccttttttgatttggatcgaaag acaggggttttgacagcttcccgagtctttgacagagaagagcaggagaggttcattttt actgttacggcccgagacaatggcacccctcccctgcaaagtcaggctgctgtaatcgtt acagtattggacgagaatgacaacagtcccaaatttactcataaccattttcagtttttt gtgtcggagaacttaccaaagtatagcaccgtaggagtgatcacagtgactgatgcagat gcaggagaaaataaagctgtcactctctccatcctgaatgacaatgagaactttgttctg gatccttactctggagttataaagtccaacgtttcttttgaccgagagcagcagagttcc tacacctttgacgtcaaggccatcgatggaggacaaccgcctcgttcttctaccgcaaaa gtcactataaatgtcatggatgttaatgacaacagccctgtggtcatctacccaccttca aatacttcttttaagctggtgcctctctctgctatccctggctctgttgtggctgaagtg tttgctgttgacattgacacgggaatgaacgctgagctgaaatatacaatcgtaagtgga aacaacaaaggtttgttccgtattgatccggtgacgggtaacattaccctggaagaaaaa cctactcctactgatgtagggctgcatcgattagtggtcaatatcagtgacctgggttat cctaaatctctgcatacccttgtccttgtgtttttgtacgtcaatgacacggctggaaac gcctcttatatttatgacttgatccgcaggactatggaaacacctttggacaggaacatc ggggacagcagccagccttatcaaaacgaggactaccttaccatcatgattgctattgtg gcaggtgccatggtggtcattgtggtgatctttgtcactgttctggtccgctgccgccac gcctcccgcttcaaagctgcccaaaggagcaagcaaggggccgagtggatgtctcccaat caggagaacaaacagaacaagaaaaagaagcggaagaaaaggaagtctcccaagagttcc ctgttgaattttgttaccattgaggaatccaaaccggaggatgccgttcatgaacctatc aatgggaccattagccttccagctgagctggaggagcaaagtataggaagatttgactgg ggcacggccccacccaccacctttaagcctaacagccctgatcttgctaagcattacaaa tctgcctctccacagtccgctttccatcttaagcctgacactcccgtctcggtgaaaaag caccacgtgattcaggaactccctttggacaacacctttgttgggggttgtgataccctt tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga ggcttcaagacaaagggccccttgcacaccagacaggcactgaattttggagatatgccg aagtacttgtgggagatttgggtacctgacaaaccatgggtgtcccagcgccgtgttacg tttcacctccccgatggctcccaggaaagctgcagtgacagtggtctaggagatcatgag cctgtgggtagtggtaccctgatctcacaccctctccctctggttcagccgcaggacgaa ttctacgaccaggcctcaccggacaagaggaccgaagcggacggcaactccgatcccaac tctggattcaaagaatgcatgaaggcgcaaactggaactggaatctcggtctcccatgtg gctgtatatatgagtgatggacctcttggccctcgaggattagctgaagctactgagatg tgcactcaagaatgcctggtcctgggtcactcagacaactgttggatgcctccctctttg ggttcataccagcagccaaagtctccactctccacctttgcacctcagaaggaatgggtt aagaaagacaaactggtgaatggccacacgttgaccagaacctggaaagaagacagcaac agaaaccagttcagtgaccgaaagcagtttggctcgggggaaggccatttcaaccctggc aatgccatggctgacattcctttggctaacttgaaatcctataaacaagcatcaggacca gtggagagtccgaaggagaaccagctataa

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