KEGG   Podarcis raffonei (Aeolian wall lizard): 128412003
Entry
128412003         CDS       T09310                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    128412003 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:praf01009]
    128412003 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:praf04515]
    128412003 (PCDH20)
Protein phosphatases and associated proteins [BR:praf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128412003 (PCDH20)
Cell adhesion molecules [BR:praf04515]
 Cadherins
  Protocadherins
   128412003 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2 SGBP_BT4661-like DC_STAMP
Other DBs
NCBI-GeneID: 128412003
NCBI-ProteinID: XP_053240681
LinkDB
Position
4:104317814..104324542
AA seq 957 aa
MISRGNERRRSSPPALGSRWLPAKRHRPLAMGQRSSPGSSTSATQRNLPNLFIFLLFLGP
FNCFASYSRATELFYSINEGLPSGFLIGNLAQDLQVQATSEGEGEATVEGKQQPQQWGKT
PLSFSLASQGLGGQYVNLDNQTGELRTSAKEIDREALCTEDNVGSSVVASSSSSPVPSSE
SCLLLLDVMVLPQEYFRLVKVKIAIHDVNDNAPCFPMPQIHLFVPENSPVNTRLAIEHPA
VDPDMGSNGVQTYHLQDDFGVFTLDVEENESGERTPYLIVMGALDREARDKYITLITAED
GGVPPLVGSATLTIGISDINDNCPQFNETQINVTVFGNSSIGLPIASVHAVDVDQGINAE
ITYSYSQKVSQSSRTLFHLDESTGVIKLSKRINGDTPRLHRLSVLANGPGCIPAVITVLI
SIIKVTMRPPEVIPRFIANEVEGVVYLRELEPVNTPIAFFTIKDPDEKYKVDCYLDGDGP
FRLTPYKPYHNEYLLETTKPLDYEAQQFYEVSVIAWNTEGFHVNKIVKVQVLDDNDNSPV
FSQTLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPEAPSYFALDKVTGVLTVS
TQLDREEREKYRYTVKAVDSGVPARESIATVTISVLDKNDNSPRFINKDFSFFVPENFPG
FGEIGVISVTDADIGQNGWVALSVVNGSDIFVIDTGKGVLRAKVSLDREQQSSYILWVEA
VDGGDPALSSTAKITVLLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDNDT
GMNAVIAYSIIGRRGPRPDSFKIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLH
STVMVNLFVNDTVSNESYIESLLRKEPDINVEEKEPQISIEPTHKRVESASCMPTLVVLS
VISLCSITLVTGMGIYICLRRGRKYHRGDETLEVQIPLNGRIDLHMLEKRPVEISNI
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgatcagccgagggaatgagaggcggcgcagctcgcccccggccctaggatcccgctgg
ctcccggcgaagaggcaccggccgctggctatggggcagcgatccagccctgggagcagc
acaagcgccacgcagaggaacctgccgaacttattcattttcctgctcttccttggacct
ttcaactgctttgcaagctatagtcgtgccactgaacttttctacagcatcaatgaaggg
ctgccctccgggttcctgatcgggaatctagcccaggatttacaggtccaggcaacatca
gagggagagggagaggccacagtagaggggaagcagcagcctcagcaatgggggaaaacc
cctctctccttcagccttgcctcccagggattaggaggtcagtatgtgaacctggacaac
cagactggagaactgcgcacctccgcaaaggagattgaccgggaggcgctctgcacagag
gataatgttggctctagtgtggttgcctcctcctcctcctccccagtaccatcttctgag
tcgtgcttgctcttgctggatgttatggtgttgcctcaggagtatttccgccttgtcaag
gtgaagattgccatccacgatgtcaatgacaatgccccgtgctttcccatgccacagatc
cacctctttgtgcctgagaactcaccagtcaacacccgtttagctatagagcatccggca
gttgacccagacatgggcagcaacggggtccagacataccacctgcaagatgactttggg
gtttttacattggatgtggaggaaaatgaaagtggggaaagaacgccttacctgattgtc
atgggtgccttggacagagaggccagagacaaatatattaccctcataactgcagaggat
ggaggagtgcctccactggtgggcagtgccaccctcactattggcatcagtgacatcaac
gacaactgcccacagttcaatgagacccagatcaatgtcacagtttttgggaattctagt
attgggttgcccatagcctctgtccatgctgtggatgtggatcagggaatcaatgcagag
atcacatattcctacagccagaaggtttctcagtcctcccgcactttgtttcatcttgat
gaaagcacaggtgttatcaagctctccaagaggattaatggtgacactcctcgtctccat
cggttgagcgtattagccaacggtcccggttgtatccctgcagtgatcactgtgttaata
tccatcatcaaagtcacaatgagacctcctgaagtgattcctcgttttatagctaatgaa
gtagaaggggtggtttacctgagggaattagagcctgttaacacaccgatagcatttttt
accataaaagatccagacgaaaaatacaaagtggattgctatttggatggtgacggccca
ttcaggttgacaccatacaaaccatatcacaatgagtacttgctggagactacaaaacca
ttggattatgaggctcaacagttctatgaagtatcagtgatcgcatggaatactgaagga
ttccatgtcaataaaatagtgaaagtgcaggttctggatgataatgacaattcacctgtt
ttttctcaaacactgatagaattatcaattgaagaaaataatgtccccaatgcttttttg
accaagctacatgcaacagatgctgacagtggagaaagagggcaggtgtcttatttccta
gggcctgaagccccttcatattttgctttagataaagtcacaggagttttgacagtttcc
acccagctggacagagaagagagagaaaaataccgctacacagttaaagcagtagattct
ggagtaccagcccgagaatcaatagccacagttaccatctctgtactggataaaaatgac
aacagtccaagatttatcaacaaggattttagtttttttgtgccagagaattttccaggc
tttggggaaattggagttataagtgtcactgatgcagatatagggcagaatggctgggta
gcactttctgttgtaaatggaagtgacatctttgttatagacactggcaaaggagtgcta
agagctaaggtctctctagacagggaacagcagagctcatacatcttatgggttgaagca
gttgatggaggtgatccggccttgtcctcgactgcaaaaataactgtccttttgctggac
atcaatgataacccacccttggtcttgtttccgcagtccaacatgtcttacctcctagtc
ctcccttctactctacctggctctcctatcacagaagtttatgctgtagataatgatacc
ggcatgaatgcagtcatagcatacagcatcatagggagaagaggtccccggccagactcc
tttaagattgaccccaagacaggcaacatcacgctggaggagtcactaatgcaaaacgac
tatggcctttatcggcttcttgttaaggttagtgatcatggttacccagaacctctgcat
tcaacagttatggtgaatctctttgtcaatgacactgtgagcaacgagagctatattgaa
agccttttaagaaaggaacctgatattaacgtcgaggaaaaagaaccacaaatctctata
gaacccacacacaaaagagtagaatcagcatcttgcatgcctaccttagtggtcctgtca
gtgataagcttgtgttcaataacattggtaactgggatgggtatttacatctgcctaagg
agaggaagaaagtaccacagaggagacgaaactttggaagtacaaatcccattaaatgga
agaattgatcttcatatgctggagaaaaggcctgtggaaatttccaatatctga

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