Podarcis raffonei (Aeolian wall lizard): 128412013
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Entry
128412013 CDS
T09310
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128412013 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128412013 (NUP98)
03036 Chromosome and associated proteins [BR:
praf03036
]
128412013 (NUP98)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128412013 (NUP98)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128412013 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128412013
NCBI-ProteinID:
XP_053240703
LinkDB
All DBs
Position
4:3641191..3686193
Genome browser
AA seq
1804 aa
AA seq
DB search
MFNKSFGTPFGGNTGGFGTTSTFGQNAGFGTTSGGAFGTSAFGTNNNAGGLFGTAQTKPG
TGGLFGSSTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSSQNNAFAQSKPVGF
GNFGTSTSSGGLFGTTNTTANPFGGTSGSLFGSTSFTVPTGTTIKFNPPTGTDTMVKSGV
STNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATPGLFGSSTATSSAA
TGLFGSTTTNTGFSYGQNKTGFGTSTTGFGTGTGGLFGPTQQTTSLFNKPFGQATTAPNA
GFSFGNTSTLGQPNTNTMGLFGATQPSQTGSLFGTATNTNTATAFGTGTGLFGQPNTGFG
VGGSSLFSNKPAGFGTTTTSAPSFGTTTTGMFGFGANTTGNSLFGNKPAAGALGTGLGTG
FGTALNAGQTSLFGNTQPKLGSTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAILQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQTTGSSKSHLFDGLDDDEPALSNGAFMPKKSIKKLVLKSIKASSLFSPTNC
EADDLASPSEYPENGDRFNFLSRSVDEIHRQDGEQQEEEDHPREVTRYYSNPIAKPIPQT
PENAMHKHHNNVDDTLLALNVRPPLRNGLEGSSEDASYHEESLQEDQEEEAGGMHQAHPA
GIVLTRVGYYTIPSMEELAKMTSDKGECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIV
HIRRKEVIVYPDDEQKPPIGKGLNRRAEVTLDGVWPTDKTSRCLIKSPERLTEMNYEGRL
EAVSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEDEEHPSKVEAKKQKTAQVPPP
GLLASRQMALGGKPAPPSKSPDVEQLGKAVEFDSDMADITQEPAQDLVAEESFAEEQEPV
PASAHIASSLDINPHTLQIMKASLLVDEEDLDLILDHRFGKQAAPVDTSQDLCSPRLPIS
SLMRGRKSHPSVGGLLQSRLSGGSLRVPTTSLQDRRSPRTSLLASALPAPPWSVGSPLTG
AFTMPSLEPDMPLKTVGVRRHPELVPLEKSVTYGKGRLLKDMALFMGRSFRVGWGPNRIL
VHSGEQLSTLSEPEDLRNESMEYGFLPTPVAPKQLSESPFKVHVEKLSLEGKAAGEDLDS
YLVPLEIKLKQSTVHMDEPCPFLTPNPGVAAIHEYARWATETSAGPEEREEAAVKDWCLV
WTLCEALWGHLKELEARLDEPTEYVLALERRRAFSRWLSQTAAERIKNEVSLAQNDSPAQ
AVFSYLTGKQISEACRLAQHSGDHRLALLLSQLAGSQDVRELLAMQLADWHQLQADCFIQ
EERLHIFALLAGKPVWHLSERRSINICAHLDWKRSLAIHLWYLLPSTAPLSKALSMYEAA
FQDSSEGEKYACSPLPPYLEGSGCVIEEGDQQHPLRDACFHLLKLYSDRCYDLHQLLDPK
SITADPLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASFAAQLESEGLWEWAVFVLLHTP
SANVRERAVRELLNRHCRLQETPESWSKEAFLMERLCVPPEWIHEAKAVRARMEGDKHKE
ALYLFRAGHWNQCHRLVIRHLASDAIINENYTYLKGFLEDLSAPERSTLIQDWDTAGLVF
LDYIRIIEMLDRIQQLDCSGYELEELHTKVTSLCNRIELLQCRNAKDRLAQSEMAKRIVD
ILRVVLSLQHPPDSASDSTPDVQRVPLRLLAPHIGRLPMPEDYVLEELRSLTQGYLRELT
VVAQ
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaacgcctttcggaggcaatacaggcggttttgggacgact
tcaacttttgggcagaatgctggctttggcactacaagtggaggagcttttgggacatct
gcttttggaacaaataataatgcaggaggactgttcgggactgcgcagaccaagccaggt
acaggagggttgtttggttccagcaccttcagccagccagccacttcttctaccagcact
ggcttcggatttggaacatcgactggcacttccagtgggttgtttgggacagcaagcact
ggcggaggcctcttttcatcccagaacaatgcctttgcacagagtaaacctgtggggttt
ggcaactttgggacaagtactagcagcgggggtttatttggaaccactaacacaaccgcc
aatccgtttggggggacgtccggttccctcttcggatcaaccagctttaccgttccaact
ggcaccaccattaaattcaatccccctacgggtactgacactatggttaagtccggagtc
agcacaaacatcagcaccaagcaccagtgcattactgctatgaaagaatatgaaagcaaa
tcgctagaggagctccgtttggaagactatcaagcgaacaggaaaggtcccaccaatcct
gtaggagctggagccacgccaggtttgtttggctcatccactgctacctccagcgcagcc
acaggactctttggctccaccaccactaacacaggcttttcctatggacagaataaaaca
gggtttggaaccagtacgacgggttttggaacaggaacaggaggcctctttggtccgact
caacaaaccaccagcctcttcaacaagccttttggccaggccacgactgcaccaaacgca
ggcttttcctttgggaacaccagcacccttggacaacccaacacaaacacaatgggttta
tttggagcaacacagccctcacaaacgggaagcctttttggaacagctaccaatacgaac
actgctactgcatttggaactgggacaggtctctttggacaacccaatacaggatttggt
gttggtggctcgtccctcttcagcaacaagcctgctggatttggaaccacgacaaccagc
gcgccctcgtttggaacaactacgactgggatgtttggtttcggtgcaaacaccacagga
aatagcctgtttgggaacaagcctgcagctggggctctgggcacaggacttggaacagga
tttggaacagccctgaacgcaggacagacttcgctgtttgggaacacccagcctaaacta
gggagtacgctggggacaggagcctttggcgcccctggatttaatacgtcaacagctact
ctgggctttggagctccccagcctgcagtggctttgactgacccaaatgcttcagccgct
cagcaagcgattcttcagcagcacctcaacagcttgacatactcgccctttggggattcc
cccctcttcagaaacccgatgtctgacccgaagaagaaagaggagagactgaagccaacc
aatccagcggcccagaaggcattgaccacccctactcactacaaactgacccctcgccct
gcaaccagggtgcgtccgaaagctttgcagaccacgggctcctctaaatcccacctgttt
gacggcctggatgacgatgagccagccctgtcaaacggggccttcatgcccaagaaaagc
attaagaagctagttttgaagagtatcaaggccagcagccttttctctccgaccaactgt
gaagcggatgacctcgcctctccctctgagtacccagagaacggagaccgattcaacttc
ctttcccggtcagttgacgagatccaccggcaggatggagagcagcaggaggaggaggac
catcctcgtgaagtcacgcggtactattccaaccccattgccaagcccatcccacagacc
cccgagaacgccatgcacaagcaccacaacaacgtggacgacaccctcctcgccctgaac
gtgcgtcctcccctgcggaacgggctggaaggcagcagcgaggatgcctcgtaccacgag
gagtccctgcaggaggaccaggaagaggaggcaggcggcatgcaccaggctcatccggca
ggaattgttttaacccgagttggctactacaccattccctccatggaagaattggccaaa
atgacaagcgacaaaggagaatgcattgtgacagacttcaccattggccgaaaagggtac
ggctcaatctactttgaaggcgaagtgaacctgactaacttgaacctggatgagattgtg
cacatccgtcggaaagaagtgattgtctacccagatgatgagcagaagccacccattggg
aaaggattgaacaggagagctgaggtcactttggatggtgtttggcccactgacaaaacc
tcgcgttgcctgataaagagcccagaacggctaaccgaaatgaactacgaaggcaggctg
gaggctgtctcccggaagcagggtgcccagttcaaggagtaccgccctgaaactggttcg
tgggtattcaaggtggctcacttctcaaaatacggtttgcaagattctgatgaggaagat
gaggagcacccatcgaaagtcgaggcgaagaaacagaaaacggctcaagtgcccccgccg
ggcctgttggcgtctcggcaaatggctctaggtgggaaaccagcacctccttccaagagc
ccagacgttgagcagcttgggaaggctgtggaatttgacagtgacatggcagacatcact
caggagccagcccaggacttggtcgcggaagagagttttgcagaggagcaggaaccagtg
ccagcttctgcacacattgcatcctctctggacatcaaccctcacacactgcagataatg
aaagcttccttgcttgtggatgaggaggacttggacctgatccttgaccaccgttttggc
aagcaagctgcaccagtggacacatcccaagacctctgttcccccagacttcccatctcc
tccttgatgcgaggacgcaagagccacccctcggttggtgggctgctgcagtcaagactc
tcgggcggatctttacgcgtcccaactacttccctccaagacagacgcagtccaagaact
tccttgctggccagcgctcttcctgccccgccttggtccgtcggttctccgctgaccggc
gcattcacaatgcccagcctggagcctgacatgccactgaaaacggtgggcgtccgcagg
catcccgagctggtgcctctggagaagtccgtcacctacgggaaaggaaggctgctgaag
gatatggccctcttcatgggacgctccttccgtgtcggctgggggcccaaccggatcctc
gtccacagcggggagcagctgagcacactgagcgagccagaagatctccgcaacgagtcc
atggagtatggattcttgccaacacctgttgctcctaaacagctctcggagtctcccttt
aaggttcacgtggagaagctgagcttggaaggaaaggcagctggcgaagacctcgactcg
taccttgttccactggagatcaagctgaagcagagcactgtccacatggatgagccgtgt
cctttcctgacccccaaccctggcgtagctgctatccatgagtatgccaggtgggcaacg
gagacgtctgctggcccagaagaaagggaagaagctgcagtgaaagactggtgcttggtg
tggaccctgtgtgaggcgctctggggccacttgaaggagctggaggcccgcttggatgag
cccacggagtacgtccttgctctggagcgccggagagccttctcccgctggctgtcgcaa
acggctgctgagcggatcaagaacgaggtctcactcgcccagaacgacagtcctgcccag
gccgtcttcagctaccttactgggaagcagatcagcgaagcttgccggctggcgcaacat
tctggggaccaccggctggctctgctcctctcgcagctggcagggagccaggatgtccgg
gagctccttgccatgcagctggcagactggcatcagctccaggcagactgcttcatccag
gaggagaggctgcacatctttgcccttttagctggcaagccggtgtggcatttgtcagag
aggaggagcatcaacatctgcgcccatctggattggaagcgttctctcgccatccacctc
tggtacctgcttccttctacagcgcctctttccaaggccctcagcatgtatgaagctgca
ttccaggactcctcggagggagagaaatatgcttgttctccgctgcctccgtatctggaa
ggctcaggctgtgtgattgaggaaggcgatcaacaacacccgctccgagacgcgtgcttt
cacctgctaaagctctacagtgataggtgttacgatctccaccagctgcttgacccgaag
agcataacagcggaccccttggactaccgcctcagctggcacctgtgggaagtgctgcgt
gccttaaattacacccacctctcagagcaatgccagggagtgctgaacgccagctttgca
gcccagctggagagcgaggggctgtgggaatgggctgtctttgtgcttcttcacaccccc
agtgcaaacgtgcgagagagagccgtgcgtgagctgctgaaccgtcactgcaggttgcag
gagacgcccgagtcgtggagcaaggaagccttcctgatggagaggctgtgtgtgccgcca
gagtggatccacgaggccaaagccgtgagggccaggatggaaggggacaagcataaggag
gctctctacctgttcagggcagggcactggaatcagtgccacaggctggtcatcaggcac
ttggcttccgatgccattattaacgaaaactacacctatctgaaagggttcttggaagac
ctgtctgctccagagcgcagcaccctcatccaggattgggacaccgcagggctggttttc
ttagactacatccggatcattgagatgcttgacaggattcagcagctggattgctctggg
tacgaactggaggagctgcacactaaagtgacgtccctttgcaacaggatagagctgctc
cagtgccgcaatgccaaggataggctggctcagtctgaaatggccaagcgcattgtggac
atcctgcgcgtggttttgagcctgcagcaccctccggactctgcctcggactccaccccg
gacgtgcagagagtgccgctgcgcctgctcgccccccacattggccgcctccccatgccc
gaggactacgtgctggaggagctgcgtagcctcacccagggctacctgcgggaactgacg
gtggtggcgcaatga
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integrated database retrieval system
