Podarcis raffonei (Aeolian wall lizard): 128412212
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Entry
128412212 CDS
T09310
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128412212
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128412212
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128412212
NCBI-ProteinID:
XP_053241061
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All DBs
Position
4:6814275..6842630
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AA seq
901 aa
AA seq
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MALEFDGITQPDWKEIVNKKLKFPEGLLNAIQDGQLMKVQQLLQVSDGILRQLDEAEDRA
WREALNLAIRTGGEEITKTLLRIVKFDFRQIHEALLVAVDTNQPTVVKLLLDRLDQEKGR
KMDIKSFSSALFDNSIDNSRFAPGVTPLTLACEKDLYEIVDMLMKKGHAIPGPHKVSCSC
LECSNGRKFDLLKFSLSRINTYKGIASRAHLSIASEDAMLTAFKLSRELKRLSKKEPEFK
PEYLALEQLCQEFAFELLGMCRNQSEVTAVLNDVADSSNDEEEEDLDDQAFEEGIPNLAR
LRLAVNYNQKRFVAHPICQQVLSSIWCGSLQSWRGSTSLWKVFVSCSIFMGMPFLCLVYY
VAPKSKFGKMLKIPVIKFLLHSASYVWFLVFLLAESLVLEYNSETFSGRNQDMWETSLHM
IWVAGFFWFECKEVWIEGFRSYLLDWWNFLDIVMLSMYLASFVLRLLIFFQGRVFCLENK
ESAECRYYTKADRQEWHTEDPQFIAEVLFAVTSMLSFTRLASILPAHETLGTLQISIGKM
IDDMIRFMFIMMIILTAFLCGMNNIYVHYQESEKLGSFNETFQFLFWTMLGMEDHDVVDM
PRFLMAQLVGRVLYGVFTIVMVVVLLNMLIAMITNCFQKIENDADVEWKFARSKLYLSFF
REGLTLPVPFNIIPSPKSIFYAVRGLFRFLCCYKPKRQQKYPPISTISNPSTDEGGQRTE
GRAAYRRQVLKALVQRYIDTARREFEESRRKDLGNRLTELNKSVLRLLSDMKQLRHTVAD
NGTADNPLNGTSVLHKYIMKVRSSFQSYDNGAGGSEQAAPTDAALPQDGAVAEEDATPLP
QGPSEGQQAEAEEGPPQVEAEERQPGVEAEERPLEVEAEERSPQVEVEVAIEENPVGEPE
T
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcactggagttcgatggaatcacgcaacccgattggaaagaaatcgtgaacaagaag
ttgaagttcccggaaggcctcctcaacgccatccaagacgggcagctgatgaaggtccag
cagctgctgcaggtgagcgacgggatcctgaggcagctggatgaggccgaggaccgggcg
tggcgagaggctctcaacctggccatccgcacgggtggcgaggagatcaccaagacgctg
ctgcgcattgtcaagtttgacttccgccagatccacgaggccttgctggttgccgtggat
accaaccagcccaccgtggtcaagctgctgctggaccgcctggaccaggagaaaggccgc
aagatggacatcaagtccttctcctcggccttgtttgacaactccatcgacaactcccgc
ttcgccccgggcgtgacgcccctcaccttggcttgcgagaaggacctctacgaaatcgtg
gacatgctgatgaagaagggccacgccatcccggggccgcacaaggtctcgtgctcctgc
ctggagtgctccaacggccgcaagtttgacctgctcaagttctcgctttctcgcatcaac
acttacaagggcatcgccagccgggcgcacctctccatcgccagcgaagacgccatgttg
acggccttcaagctcagccgagagctcaagcgcctctccaagaaggagcccgaattcaag
cccgagtacctggccctggagcagctgtgccaggagtttgcctttgagctgctgggaatg
tgccgcaaccagagcgaggtgacggccgtcttgaatgacgtggcggattcctcgaatgac
gaggaagaggaggacctcgatgaccaggccttcgaggaggggatccccaacttggcaagg
cttcgcctggctgtcaactacaaccagaagcggtttgtcgcccaccccatctgccagcaa
gtgctgtcgtccatctggtgtgggagcctgcagagctggaggggcagcacctcgctctgg
aaggtcttcgtctcctgttccatcttcatggggatgcctttcctgtgcctcgtctactac
gtggcccccaaatccaagtttggcaaaatgctgaagatccccgtgatcaagttccttctg
cattcggcctcgtatgtctggttcctggtcttcctgctggcagagtcgctggtgctggag
tacaacagcgagaccttttcggggcggaaccaggacatgtgggagacgtcgctgcacatg
atatgggtggcaggtttcttctggtttgagtgcaaagaggtttggatcgagggcttccgc
agctacctcttggactggtggaacttcctggacatcgtcatgctcagcatgtacttggcc
tcctttgtcctcaggctcctgatattcttccagggccgtgttttctgtctggagaacaag
gagtctgcagaatgccgttactacacgaaagcggaccgtcaggagtggcacactgaagac
ccccagttcatcgctgaggtgctgtttgctgtgaccagcatgctgagcttcacccgcctg
gcttccatcttgcccgcccatgaaaccttggggaccctgcagatctccattggcaagatg
attgacgacatgatcaggttcatgttcatcatgatgatcatcttgactgctttcttgtgt
gggatgaacaacatctacgtccactaccaagagtctgaaaagctggggagcttcaacgag
acattccagttcctcttctggaccatgcttgggatggaagaccacgatgtggtggacatg
ccccggttcctcatggctcagctggtagggagggtgctgtatggggtcttcaccatcgtc
atggtggttgtcctcctcaacatgctcatcgccatgatcaccaactgcttccagaaaatt
gagaacgatgccgacgtggaatggaagtttgcccgttccaagctctacttgtctttcttc
agagaaggcttgacgctgccagtgcccttcaacatcatcccgtcaccaaagtccatcttc
tacgctgtcaggggcctcttccgcttcctgtgctgttacaaaccaaagcgccagcagaaa
taccctcccatctcaaccatttctaacccctccacggatgagggcggccagcgtacggag
ggccgcgctgcctaccggcgccaagtgctcaaggcgctggtgcagcgctacatcgacacg
gcccggcgggagtttgaggagagccgcaggaaagatctggggaaccgcctgacagagctg
aacaagtctgtgctgcgcctcctctccgacatgaagcagctgcgccacacagtggccgac
aacggcacggcggacaaccccttgaacgggaccagcgtcctgcacaagtacatcatgaag
gtgcgtagcagcttccagagctacgacaatggagcaggcggctctgagcaggcagccccc
acggatgccgccttgccccaggatggggccgttgccgaagaggacgcaacgccgttgcct
cagggaccctctgagggacaacaggcggaagctgaggaagggccgccccaggtggaagct
gaggagagacagcctggggtggaggctgaggagaggccgctggaggtggaagctgaggag
aggtcaccccaggtggaagtagaggtggcaattgaagagaaccctgtaggagagccagag
acttga
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