Podarcis raffonei (Aeolian wall lizard): 128412317
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Entry
128412317 CDS
T09310
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128412317
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128412317
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_3
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128412317
NCBI-ProteinID:
XP_053241198
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All DBs
Position
4:6845491..6870265
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AA seq
929 aa
AA seq
DB search
MTWSILCQTHLQGAGTSVLGKMALEFDGITQPDWKEIVNKKLKFPEGLLNAIQDGQLMKV
QQLLQVSDGILRQLDEAEDRAWREALNLAIRTGGEEITKTLLRIVKFDFRQIHEALLVAV
DTNQPTVVKLLLDRLDQEKGRKMDIKSFSSALFDNSIDNSRFAPGVTPLTLACEKDLYEI
VDMLMKKGHAIPGPHKVSCSCLECSNGRKFDLLKFSLSRINTYKGIASRAHLSIASEDAM
LTAFKLSRELKRLSKKEPEFKPEYLALEQLCQEFAFELLGMCRNQSEVTAILNDVADSSN
DEEEEDLDDQAFEEGIPNLARLRLAVNYNQKQFVAHPICQQVLSSIWCGSLQSWRGSTNL
WKVFISSSIFMGMPFLCLLYYVAPRSKPAKMLKIPVIKFLLHSASYVWFLVFLLAESLVL
EYNNETFSGRNQDFWETSLHMIWVAGFFWFECKEVWIEGFCSYLLDWWNFLDIVMLSMYL
ASFVLRLLIFFQGRVFCLDNKESAECRYYTKADRQEWHTEDPQFMAEVLFAVTSMLSFTR
MAYILPAHETLGTLQISIGKMIDDMIRFMFIMVIILTAFLCGMNNVYVHYQDSEKLGSFN
ETFQFLFWTMLGMEKHDVVDMPNFFVAQLVGRVLYGVFTIVMVVVLLNMLIAMITRSFQK
IENDADVEWKFARSKLYLSFFREGLTLPVPFNIIPSPKSIFYALRGLFRFLCCYKPKRQQ
KYPPISTISNPSTDEGGQRTEGRAAYRHQVLKALVQRYIDTARREFEESRRKDLGNRLTE
LNKSVVRLHSEMKHLRHTVVTNGTAANPLDGASVLHKYIMKVRSSFQGYDNDTGSSGQGS
PVEAVVHQDGAVAEEDTTLLPQEPSEGQKVEAEEGPPQVEAEERQPGVEAEERPLEVEAE
ERPPQVELRVPEVVIDLAPEENPVGEPET
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacctggagcatcctttgccagacacacctgcaaggagctggcacgtctgtcctgggc
aagatggcactggagttcgatggaatcacgcaacccgattggaaagaaatcgtgaacaag
aagttgaagttcccggaaggcctcctcaacgccatccaagacgggcagctgatgaaggtc
cagcagctgctgcaggtgagcgacgggatcctgaggcagctggatgaggccgaggaccgg
gcgtggcgagaggctctcaacctggccatccgcacgggcggcgaggagatcaccaagacg
ctgctgcgcattgtcaagtttgacttccgccagatccacgaggccttgctggttgccgtg
gataccaaccagcccaccgtggtcaagctgctgctggaccgcctggaccaggagaaaggc
cgcaagatggacatcaagtccttctcctcggccttgtttgacaactccatcgacaactcc
cgcttcgccccgggcgtgacgcccctcaccttggcttgcgagaaggacctctacgaaatc
gtggacatgctgatgaagaaaggccacgccatcccggggccgcacaaggtctcgtgctcc
tgcctggagtgctccaacggccgcaagtttgacctgctcaagttctcgctttctcgcatc
aacacttacaagggcatcgccagccgggcgcacctctccatcgccagcgaagacgccatg
ttgacggccttcaagctcagccgagagctcaagcgcctctctaagaaggagcctgaattc
aagcccgagtacctggccctggagcagctgtgccaggagtttgcctttgagctgctggga
atgtgccgcaaccagagcgaggtgacggccatcttgaatgacgtggcggattcctcgaat
gacgaggaagaggaggacctcgatgaccaggccttcgaggaggggatccccaacttggcg
aggcttcgcctggctgtcaactacaaccagaagcagtttgtcgcccaccccatctgccag
caagtgctgtcgtccatctggtgtgggagcctgcagagctggaggggcagcaccaatctc
tggaaggtcttcatctccagctccatcttcatggggatgcctttcctgtgcctcctctac
tacgtggcccccagatccaagcctgccaaaatgctgaagatcccagtgatcaagttcctt
ctgcattcggcctcgtatgtctggttcctggtcttcctgctggcagagtccctggtgctg
gagtacaacaacgagaccttttcggggcggaaccaggacttctgggagacatcgctgcac
atgatatgggtggcaggtttcttctggtttgagtgcaaagaggtttggatcgagggcttc
tgcagctacctcttggactggtggaacttcctggacatcgtcatgctcagcatgtacctg
gcctcctttgtcctcaggctcctgatattcttccagggccgtgttttctgtctggataac
aaggagtctgcagaatgccgttactacacgaaagcagaccgtcaggagtggcacaccgaa
gacccccagttcatggccgaggtgctgtttgccgtgaccagcatgctgagcttcacccgt
atggcttacatcttgcctgcccacgaaaccttggggaccctgcagatctccattggcaag
atgatcgacgacatgatcaggttcatgttcatcatggtgatcatcttgaccgccttcctg
tgtgggatgaacaacgtctacgtccactaccaagactctgagaagctggggagcttcaac
gagacattccagttcctcttctggaccatgcttgggatggagaaacacgatgtggtggac
atgcccaatttcttcgtagctcagctggtggggagggtgctgtatggggtcttcaccatc
gtcatggtggtcgtcctcctcaacatgctcatcgccatgattacaaggtccttccagaaa
atcgagaacgatgccgacgtggagtggaagtttgcccgctccaagctctacttgtctttc
ttcagagaaggcttgacgctgccagtgcccttcaacatcatcccgtcaccaaagtccatc
ttctacgccctcaggggcctcttccgcttcctgtgctgttacaaaccaaagcgccagcag
aaatacccccccatctcaaccatctctaacccctccacggatgagggcggccagcgtacg
gagggccgcgctgcctaccggcaccaagtactcaaggcgctggtgcagcgctacatcgac
acggcccggcgggagtttgaggagagccgcaggaaagatctggggaaccgcttgacggag
ctgaacaagtccgtggtgcgcctccactcggagatgaaacatctgcgccacacggtggtc
accaacggtacagcggccaaccccttggacggggccagcgtcctccacaagtacatcatg
aaggtgcgcagcagcttccagggctacgacaacgatacaggcagctctgggcaggggtcc
cctgtggaagctgttgtgcaccaggatggggccgttgccgaagaggacacaacgctgttg
cctcaggaaccctctgagggacaaaaggtggaagctgaggaagggccgccccaggtggaa
gctgaggagagacagcctggggtggaggctgaggagaggccgctggaggtggaagctgag
gagaggccaccccaggtggagctgagggtgccagaggtggtgatagatctggcaccagaa
gagaaccctgtaggagaaccagagacctga
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