Podarcis raffonei (Aeolian wall lizard): 128412413
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Entry
128412413 CDS
T09310
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
praf03016
]
128412413 (LCMT2)
Enzymes [BR:
praf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
128412413 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
128412413 (LCMT2)
Transfer RNA biogenesis [BR:
praf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128412413 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_KLHDC2_KLHL20_DRC7
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_1
Kelch_2
Motif
Other DBs
NCBI-GeneID:
128412413
NCBI-ProteinID:
XP_053241265
LinkDB
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Position
4:complement(5463..21840)
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AA seq
654 aa
AA seq
DB search
MGYTRDRFALRMAPAGGRRAPVIHRGYYVRAQAVEHCVRAFLLSTQGCPLRQIISLGAGF
DSLFFFLKSEGLLCHTVVFEVDFPDVARPKAALIRGTEELITLVGNDASAQALGATAFSG
EDYRLLGVDLSELPRLEEALHRAGLDPKVPTMLLAEVVLTYMEVERSDALVQWAAGHFLH
AWFILYEQIHPEDPFGSVMQNHFSRLNSHLRSLAQYPNCKAQRTRFLQRGWTECSIVNMN
DFYSQVVLGEERQRIQALEPFDEFEEWHLKCSHYFILVASKGETPSPNLLFPGLEASLTH
SLPCFAGTLAASACAPVSGLRRYGHRSVIIAPDVILTTGGFGDHGGRHCRLTELHALIKQ
KDAWQGSSVTLAEPGEAWDGRLFHSLTLLQAGWAVVFGGRRSPVRPALEVRCLRVLESAS
ASASGTLRVELTRLLPVEDLPLPRWRHTATKVVHQGEAYMFVYGGCCSRQAVLADWCFLR
LKEEEELSCQQIPVDGPVPAGRHSHSACGWAGGVLIAGGLDAAEQPLGTILFLRPAGKGF
QWHSVETHPPVTPRYSHTAHVHRGRLLLVGGVWFHAPAVPGVTVIDLATGLTAEYCIDTA
SLEWPLMLHNHSSVFLPDEEELLLLGGGGNCFSFGTHLNCHPVRLALGSIWSEP
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggctacacgcgcgaccgcttcgcgctccggatggcgcccgcgggaggccgccgcgcc
cccgtcatccaccggggctactatgtccgggcccaagcagtggaacactgtgtccgggca
ttcctgctcagcactcagggctgccctctgaggcagatcatctccttgggcgcaggcttt
gactccctcttcttcttcctcaagagcgaggggcttctgtgccacacagtggtctttgag
gttgattttccagatgtggcacgccctaaagcagccctcatcagaggaacggaggaactg
atcaccctggtggggaacgacgcttctgcacaggctctgggagcgactgctttttctgga
gaggattacaggctgttgggagtggacctctctgagctgccgaggctggaagaagccttg
cacagggcaggactggaccccaaagtccccacaatgctcctggctgaagtggtgctcacc
tacatggaggtggagaggtcagatgccctggtccagtgggccgctggacacttcctgcat
gcgtggttcatcctgtatgaacagatccatcccgaagacccctttgggagtgtcatgcag
aatcacttcagccggctcaactcccaccttcgctccctggcccagtaccccaactgtaag
gcccagcggacccgattccttcagaggggctggacggaatgcagcatcgtcaacatgaat
gacttctacagccaggttgtccttggagaggaacggcagaggatccaagccctggagcct
tttgatgagtttgaggaatggcacctgaagtgctcccactatttcatccttgtggcctcc
aaaggagagacaccatctccaaatcttctgtttcctggcctggaagcctccctgactcac
tctctgccatgttttgctgggactcttgctgcatctgcttgtgcccctgtctctgggctg
aggcgctatggccaccgctctgtgatcattgcccccgacgtgatcctgaccactggaggt
tttggggaccacgggggacgtcactgccgcctgacagagctgcatgccttgatcaagcag
aaggatgcctggcaagggagcagtgtgaccttggccgagccaggagaagcctgggacggc
cggctcttccactccttgactctgctgcaggcaggctgggccgtggtgtttggggggcgt
cggtccccggtgaggcctgctctggaggtgcgttgcctgagagtgttggagtctgccagc
gcctccgcctctggcactcttcgtgtggagctgactcggctgctgcctgtcgaggacctg
cctttgccccgctggaggcacacggcaaccaaagttgtgcatcaaggtgaggcgtacatg
tttgtctatgggggctgttgctccaggcaggctgtgctggcggattggtgcttcctgcgc
ctgaaggaggaggaggagctctcttgccagcagatccctgtggatggacctgtcccagct
ggccgccactcccacagcgcctgtggctgggcaggtggggtgctcattgcggggggcctg
gacgcagcagagcagcctctgggcactatcctctttctgaggccagctgggaaaggcttt
cagtggcactcagtggagacccacccaccagtcacgcccaggtactcacacacagcccat
gtgcatcgggggcggctgttgctggtgggcggcgtctggttccatgccccggccgtgcct
ggcgtcactgtgatagatctggcaacgggactcacggcagagtattgcattgacacggct
tctctggagtggcctctgatgttgcacaaccacagcagcgtcttcctgccagatgaagag
gagctgctgcttcttggcggtggcggcaactgcttctcctttgggacacatctgaactgc
catcctgtccgcctggccctgggtagtatttggagtgagccgtga
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