Podarcis raffonei (Aeolian wall lizard): 128412575
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Entry
128412575 CDS
T09310
Symbol
CNTN5
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128412575 (CNTN5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
praf00537
]
128412575 (CNTN5)
Cell adhesion molecules [BR:
praf04515
]
Immunoglobulin superfamily
Contactins
128412575 (CNTN5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
praf00537
]
Others
128412575 (CNTN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
C2-set
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
128412575
NCBI-ProteinID:
XP_053241645
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All DBs
Position
4:19974796..20642331
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AA seq
1101 aa
AA seq
DB search
MPLSWKLTLLLSLTSCLTGYSKAVPGIPTSYAAVLRLKSASSSYSSSAINSKSRQRSSSP
ALGSISSPSWQGAPQHYHSPTNLYHFAEAFKHDESVDYGPVFIQEPDNVIFPMDSDEKKV
SLTCQARGNPAPTYRWLRNGTEIDTESDYRYSVIEGSIIINNPSETKDSGQYQCFTTNMF
GSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFV
AEDSRRFISQETGNLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLRTDGVMGEYE
PKIEVHFPYTVTAAKGSTVKMECFALGNPVPTISWRKVNGPNPSKARLRKSQAVLEIPNV
QLEDAGTYECKAENSRGRNVFRGQLQVYTYPHWVERLNDTQLDSGDQLRWECKATGKPRP
TYRWLKNGTPLWPESRIEMVNGVLLIHSVNQSDAGMYQCVAENKHGAVYTSAELRILALA
PTFPPSQLKKTIIITRGQEVAVECKPQASPKPAISWKKGDKAVRENKRITVLPDGSLRIL
NSTKSDEGRYVCRGENVFGSAEIVASVFVKEPTKIDLSPKRTELTVGESIVLSCKAIHDP
TLDVMFHWILNGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSI
SDEAELLVRGPPGPPGIVIVEEITETTATLSWTPGADNHSPITSYNLQARSPFSLGWQTV
KTVPENISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTKEAVPKTAPAN
VSGRSGRRHELVIAWEPVSEEFQNGESFGYIVAFRPNGTRGWKEKMVTSSDASKFIYRDE
SVPPLTPFEVKVGAYNNKGDGPFSPIVVICSAEGEPSAAPTDVQATGLSVSEILVAWRHS
KESLGRPQGFEVGYWKDMEQEEAAEKTRTEGNESSIILTGLEGNTLYHLRVKAYNSAGYG
PPSSAVRATTKKSPPSQAPSNIMWIQDGSHVSLGWEPVKPLANESDVMGYKVLFRQEGDS
NSQVIETQKTSAVVLLPDVGVYIIEVRAVSEGGDGMPSSQIRVPSFSGGKVTSSQSSLRA
FSTSSSTVTFLLVLMVPSTSW
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtcatggaaactcaccctgcttctgtcactcaccagctgtcttacaggatac
tccaaagctgttccaggaatccctacttcatatgctgctgtcttaaggctcaagtctgcc
agctcgtcatactcctcatcggccattaactcgaagagcaggcaacgatcaagcagccct
gctttgggaagcatctcttcgccaagctggcaaggggcaccacaacattatcactcgccg
acaaacctctatcactttgcagaggccttcaagcatgatgagagtgtcgattatgggccg
gtgtttatacaagagcctgacaatgtaattttccccatggattcagatgagaagaaagta
tccctcacctgtcaagcacgagggaacccagcgccaacctacagatggctccggaatgga
acggagatagacaccgaaagtgattaccggtacagcgtgatagaagggagcattatcatc
aataaccccagcgaaacaaaagattctgggcagtatcagtgctttaccaccaacatgttt
ggcagcatattgagcagagaagctacacttcagtttgcatatctggggaatttcagtggt
cggacgagaagtgctgtgtcagtgcgggaaggtcaaggcgttgttctgatgtgctcccca
ccgctccattcaccagagatcatctacagctgggtatttaatgaattcccctcctttgtg
gcagaagacagccggcgctttatctcccaggaaacgggcaatctctacatttccaaagta
cagccctcggatgtaggcagctatatctgcctggtgaagaacacggtgaccaatgcgaga
gtgcttagcccacccacaccgctaacacttcgaactgacggtgtgatgggggaatatgag
ccgaaaattgaagtccattttccatacacagttacagctgctaagggatctactgttaag
atggagtgctttgcacttggcaacccagttccaacaatctcatggaggaaagtgaatggc
cccaatccaagcaaagcccgcctgcggaagtcccaggcggttcttgaaattccaaatgtg
cagctggaagatgcagggacatatgaatgtaaggccgaaaactcacgtggaaggaatgtc
ttcagaggacagctgcaagtatacacatacccacattgggtggagaggcttaatgatacc
cagttagacagtggagatcagctccgatgggaatgcaaagctactggaaagccaagaccc
acctatcgatggctgaaaaatggaacacctctctggccagagagcaggattgagatggtt
aatggtgtactgctgatccacagtgtcaatcagtctgatgctggaatgtaccagtgcgta
gccgaaaacaagcacggagccgtttacaccagcgccgagttgaggattttggctttggct
ccaactttccccccaagccaactgaagaaaacaatcattataaccaggggccaagaagtt
gccgtcgagtgcaaaccacaagcctcccccaaacccgccatctcatggaagaaaggagac
aaagcagtgagagagaataaaaggataactgttcttccagatgggagcctcagaatcctg
aattccaccaaatccgatgagggaagatatgtatgccgaggtgaaaatgtatttggttct
gcagaaatagttgcttcagtgtttgttaaagagcctaccaagatagacctgtctcctaaa
aggaccgagctgacagtgggagagagcattgtcctcagctgcaaagccattcatgacccc
accttagatgtcatgttccactggattctgaatgggcagcctatcgattttgagaaagaa
ggaggacactttgaaagcatcagggcgcaagcgtcctctgcagatttaatgatcaggaac
attcttctgatgcatgctgggagatatggctgcagggtacagaccacagcagacagtata
tcagatgaggcagaacttcttgtgaggggtccacctgggcctccagggattgtgattgtt
gaggagatcacggagaccacggcaacactttcatggacaccgggggcggacaaccacagt
cctatcacctcctacaatcttcaagcacggagtccattttcacttggttggcagacagtg
aaaacagttccagaaaacatcagcggtgacatggagtctgccatggctgtcgagctgaac
ccgtgggtggaatatgaatttagagttgtcgcaaccaacaaaattgggactggagatcca
agcgccccctctcgagtgatccggaccaaggaagcagttccaaagacagctcctgctaat
gtaagtggcagaagtggaagaaggcatgaattagtaatagcatgggagccagtttctgaa
gagttccagaatggagaaagctttgggtacatagtagccttccggcccaacgggacaaga
ggctggaaggaaaaaatggtaacctcttccgacgcttccaagttcatctacagagacgag
agtgtgcctcccctgactccattcgaagtgaaagttggcgcttacaacaacaaaggagat
gggccattcagtcctatcgtagtcatttgctctgcagagggagaacccagcgctgctcca
actgatgtccaggctacaggattgtctgtttcggagattctcgttgcgtggagacatagc
aaagaaagcctgggaagacctcagggatttgaggttggttactggaaagatatggaacaa
gaggaagcggctgaaaagaccaggacagaaggaaatgagtcatccatcattctgacaggg
cttgaaggcaacacattataccacctgagagtgaaggcgtacaactcagcagggtatgga
ccacccagcagcgccgtccgtgccaccaccaagaaatctcctcctagccaagcgccaagc
aacattatgtggatacaagatggctcccacgtttccttgggatgggaacctgttaaacct
ttagctaatgaatcagatgtcatgggatacaaggtcttgtttaggcaggaaggtgacagc
aacagtcaagtcattgaaacacagaaaacatctgcagtggtgcttctccctgatgtcggg
gtctatatcatagaggtccgcgcagtcagtgaaggaggggatgggatgccgagctctcaa
atcagggtaccatctttttcaggtggaaaagtcacaagttctcagtcaagcctacgtgct
ttctctacttcgtcatcgactgtaacgttccttttggtactaatggtcccgtcaacctcg
tggtga
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