Podarcis raffonei (Aeolian wall lizard): 128412623
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Entry
128412623 CDS
T09310
Symbol
PALS1
Name
(RefSeq) protein PALS1 isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128412623 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
praf04990
]
128412623 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
praf04990
]
PDZ domain-containing proteins
MAGUK family proteins
128412623 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128412623
NCBI-ProteinID:
XP_053241757
LinkDB
All DBs
Position
1:complement(48564995..48617446)
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AA seq
700 aa
AA seq
DB search
MSDKWYGLLHTTMTTSHMNGHITEDSDSETKNVDLVPLEEPQRHREMAVDCPGDLGTRMM
PLRRSAQLERIRQQQEDLRRRREEDGKKQELDLNSSMRLKKLAQIPPKTGIDNPMFDTGE
GVILESPHCAVKILEVEELLSSLKHVQHTLVDPQSQEEIALILQLVQNTDFQNAFKIHNA
VTVHMNKTSPPYPLISNAQELAQEVQSVLKPSHQKDGLELNSLLNAPHIQALLLAHDKVA
EQEMQPEPVTDEKIYENVGLYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGA
AEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPTKETVI
HVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEENQPLAGLIP
GKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDGKKGFQLSSSIF
SDYDNEEILTYEEMSLYHQPANRKRPIVLIGPQNCGQNELRQRLMNHEADRFASAVPHTT
RNRRDNEVAGRDYHFVSRQVFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLL
NIHTQSLKSLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPDELREIIEKTREMEQNN
GHYFDTAIVNSDIDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagtggtacggcttactgcatacaacaatgacaacctctcatatgaatggg
catataacagaagattctgacagtgaaacaaaaaatgtggatcttgtaccgcttgaggag
cctcagaggcacagagagatggctgttgattgccctggtgatctgggaaccaggatgatg
ccactgcggaggagtgctcaacttgagcgaattagacaacaacaagaggacctaaggcga
aggcgggaagaagatggaaagaaacaggaactggaccttaattcttctatgcggttgaag
aagctagctcaaattcctcccaaaactggaatagacaaccctatgtttgacacaggcgaa
ggagttattctagagagcccacattgtgctgtaaaaatcctagaagttgaggagcttcta
tcatctctgaaacatgttcagcacaccctggtagatccccaaagccaagaggaaatagct
ctaattttacagctggttcaaaacaccgactttcaaaatgcatttaaaatacataatgct
gttaccgtgcatatgaacaaaaccagtccaccgtacccacttatctccaatgcgcaagag
cttgcacaagaggtacagagtgttttgaagccaagccatcagaaagatggattggaactt
aattctttattgaatgcccctcatattcaggcactgctgttggctcatgataaagttgct
gagcaggaaatgcaaccagagccagtgacggatgaaaagatttatgagaatgtaggtctg
tatggaggagagacagttaaaatagttcgcattgaaaaggctagagatattccattgggc
gctacagtacgcaatgaaatggattcagtcatcattagtcgaatagtgaagggaggtgct
gcagagaagagtgggctgttgcatgaaggtgatgaagttctggaaattaacggaattgaa
attcgtggaaaggatgttaatgaggtttttgatttactggcggacatgcacggcacgctg
acatttgtcctgattcccagtcagcagagtaagccaccacccacaaaagagacagtgatc
catgtgaaagctcactttgactatgatccatctgatgacccctacgtcccatgcagagag
ctaggcttatcctttcaaaagggagatatactccatgtcatcagccaagaagatccaaac
tggtggcaggcctatcgagatggagatgaggaaaatcagcctttggcaggcctcattcca
gggaaaagttttcagcaacaaagagaagctatgaagcaaactatagaggaagacaaagaa
ccagaaaaatcagggaaactttggtgtgcgaagaaaaataaaaagaaaaggaaaaaggtt
ctgtataatgccaataaaaatgatggtaagaagggatttcaactatcttccagtattttt
tctgattatgacaacgaggagatcttgacttatgaggaaatgtcactttatcaccaacca
gcgaataggaaacgacccattgtcctgatcggtccacaaaactgtggccaaaatgaactt
cggcaaaggttaatgaatcacgaagctgacagatttgcttctgcagttcctcatacaaca
cgaaataggagagacaatgaagtggctggcagagattaccattttgtatcacggcaagta
tttgaggccgacatagcagcaggaaagtttattgagcatggtgaatttgagaagaatctg
tatggtaccagcatagactctgtccggcaagtgatcaattctggaaagatatgtctttta
aatatccatacacagtcactgaagagccttcgcaattcagacttgaagccatatattatc
ttcattgcaccaccttcacaagagcggcttcgtgcattactggccaaagagggcaaaaat
ccaaagcctgatgaacttcgagaaattatagagaaaacccgagagatggagcaaaataat
ggccattacttcgacacagctattgtgaattctgatattgacaaagcataccaagaatta
cttcgtttaattaacaaacttgatacagaacctcagtgggttccatcctcctggctacgg
tga
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