Podarcis raffonei (Aeolian wall lizard): 128412664
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Entry
128412664 CDS
T09310
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128412664 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128412664 (SPATA13)
Membrane trafficking [BR:
praf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128412664 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
128412664
NCBI-ProteinID:
XP_053241846
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All DBs
Position
4:complement(26320689..26483103)
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AA seq
1356 aa
AA seq
DB search
MFRVTFNVVTEKVTFTLAACPSIAWKVSSKKAVQTTGELNPHHRCENNNPKRCTIEEKLW
FGENEGDKVLDVRYNPIYPDAYAENMTTYQNGCGNGTSVTCMVVDNKESKHCNTSLGQSG
DPSHSYENEGQDDKVSPSKLMHFFSTPRKRSGSNVERPRSLIVMGNPSTWNALSSIRKIG
SFKKLKSSVLPGMPAKEDSDTLNDSVLENNIRKRVPNNMLVRVQTNRYSYSGPLHDSQST
TDNAFVSDHSDGEEGDDSFLRNTRRSRSIRRAYGIGRINLLDTDKIQGHQDTTRTVSPVI
QEAQICEIVVKDSESSKVIYRRSKSTDNLNFLKKSSFKRKSTSNLTDLKVVNEKQTPQRT
TSISSADSDKASRNSERQSKRWKSPIRAKDFDRVLKLVSNVADVALKKEGPRNEIPSSNE
PNQRTRSNSRLHDDYSRRVSSNTEKDRRRCAPPRSSPDSTVSTSSVQSSEDDNVAANTLT
PEGSGLRMSSCDLPDSVSSPPPLQDVGTIANEVFYEDSDEPRSSRQFTCSSTEHPASPAR
PVIPKPQSPCAENLKCNMDFRCPDRNSTLSLSSMESEGRGDGPSAKLGKSPVCFQDSVQA
VFFDDTNEDSGISSHSQLSLNLAVSVDEKKEEVVTDDHWKKAPYQDEDRTDTQKVTPRRW
GSGKRSRPRPLSDYGQLAIRSFSIPEDSVAMESQKMDCVDADTEPGSPSAAPGTCMVASQ
RARKRRPISVIGGANFYENQTEEITDLLTQPVARPPVPAHQVPPYKAVSARFRPFTFSQS
TPIGLDRVGCKRQMRASNGATDGGTESSALVDDNGSEEDYSYEDLCQASPRYLQPGGEQL
AINELISDGSMVYAEALWDHVTMDDQELAFKAGDVIQVLEASNKDWWWGRNEEKEAWFPA
SFVRLRVNQEELAENGGSLQDEEPNADPEKHRQKIAENKDQMRTNVIQEIMNTERIYIKH
LKDICEGYIRQCRKHTGMFTGAQLSTIFGNIEDIYKFQRKFLKDLERQYNKEEPHLSEIG
SCFLQHQEGFAIYSEYCNNHPSACIEMSNLMKQGKYRHFFEACRLLQQMIDIAIDGFLLT
PVQKICKYPLQLAELLKYTTQEHSDYNDIKAAYEAMKNVACLINERKRRLESIDKMARWQ
VSIVNWEGQDILGRSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDMLYY
KGRVDMDEFEVLDIEDGREKDFNINVKNAFKIVNSATEEVHLFCGKKPGDKKRWLEAFAN
ERRRVQEDKEMGMEISENQKKQAMQNARKSRHGKMKGVGYSGCPMPPPHQSLHPIHQRHI
TVPTSIPQQQVFALAEPKRKPSIFWHTFNKLTPFKK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtcacattcaatgtggtgacagagaaagttaccttcaccttggcagcctgc
ccctccatcgcgtggaaggtaagctccaaaaaggcagtgcagactactggagaactaaat
ccacaccacagatgtgaaaacaacaaccccaaaagatgcaccattgaagaaaagctttgg
tttggtgagaatgaaggagacaaggttttggatgtgagatataaccccatatatcccgat
gcttatgcagaaaatatgacaacttatcagaatggctgtggaaacggcacctctgttacc
tgtatggtggtggataataaggaatcgaagcactgcaatacctccttaggtcagagtggt
gacccaagtcacagctatgaaaatgaaggccaggatgataaagtcagcccttccaaactc
atgcactttttctccactcctcggaaaagatctggctccaatgtggaaaggcctcgttct
ctgatagtcatggggaacccctcaacatggaatgccctgtcttccattaggaaaatagga
tctttcaagaagttaaaatcctccgttctcccaggaatgccagccaaggaagactctgac
accttaaatgatagcgtgttggaaaataatatcagaaagcgtgtcccaaacaatatgttg
gtgagagttcaaacaaacaggtattcttattcagggccactacatgactcgcaaagcaca
acagacaatgcttttgtttctgatcattctgacggggaggaaggtgatgattccttcctg
aggaacactcgcaggtcacgcagcatcaggcgtgcctatgggattggccgtataaattta
ttagacaccgataaaatccagggccatcaggacactaccaggacagtatcccctgtcata
caggaggcccagatttgcgaaatagtagtgaaagattctgaaagcagcaaagtcatctac
cggaggagcaaaagcacagataacctgaacttcctgaaaaagagctcattcaaaaggaag
tcgacctcaaacctcaccgacctcaaagtagtgaacgaaaagcagactccacagagaaca
acaagtatttcttcagcggactctgacaaagccagcaggaactcggagcgccagtcgaaa
cgctggaagagcccaatcagggcgaaggatttcgacagagttttgaaacttgtcagcaac
gttgctgacgttgcgttgaagaaagagggtcccaggaacgaaatcccatcctctaatgag
ccgaaccagaggactagatcaaacagtcggctgcatgatgattactcacgtcgggtttcc
agcaacactgagaaagacaggcggaggtgtgccccacccaggagcagcccagactctacc
gtttccacatcgagtgtccagagttctgaggatgacaatgttgcggctaatacattaacc
cctgaaggcagcggtctcaggatgtcgtcctgtgaccttccagattcggtgtcttcgccg
cctccacttcaggacgttgggacaatcgcgaacgaagtgttttacgaagactctgatgag
ccaagaagttctcgccagtttacatgcagcagcactgagcatcctgcctcccctgccaga
cccgtcatccccaagcctcagagcccttgtgccgaaaacctcaagtgcaatatggatttc
cgttgtcctgacaggaacagcaccttgtcactcagctccatggaaagcgagggaagaggg
gatgggccttctgccaagctagggaagagccctgtttgcttccaggattcggtgcaagct
gtgttctttgacgacacaaatgaagacagtggcatcagcagccactctcagctgagtctc
aatttagctgtgagtgttgatgaaaagaaggaggaggttgttactgatgatcactggaag
aaggccccataccaggatgaagacaggacagacactcaaaaggtcacacccagaagatgg
ggctctggaaaaagatcgcgccctcggcccctctcagattacggccagttggcaattagg
agtttctcaataccagaagattccgttgctatggagtctcagaaaatggattgtgtggat
gctgacactgagcccggatcgccttctgctgcgccgggaacctgtatggtagccagtcaa
agagcgcgcaaaagaagacccatctctgtcattggtggggccaatttctatgagaaccaa
acagaagaaataacagacctcctcacacaaccagttgcacgccctccggtaccagcacat
caggttcctccttataaagctgtctcagccagattccgcccctttaccttttctcaaagt
acacccatcggtctggatagagttggatgtaagcggcaaatgagagcatccaatggtgct
actgatggaggtactgaatcttctgccttagtggatgataatggtagcgaggaggattac
agctatgaggacctctgccaagccagccctaggtacttgcagcccggaggggagcagcta
gccattaatgagctgataagcgatgggagcatggtctatgcagaggcactctgggatcac
gtgaccatggatgaccaggaattggccttcaaagccggggacgtcatccaagtccttgag
gcttccaacaaggattggtggtggggcagaaatgaggagaaggaagcctggtttccggca
agcttcgtcaggctgcgggtcaaccaggaagaacttgcagaaaatggtggcagcctccaa
gatgaagaacccaatgcagaccctgagaagcaccgccaaaaaattgctgaaaacaaggat
cagatgagaacaaacgtgattcaggaaataatgaacacggagcggatctatatcaaacat
ctcaaggacatctgtgaagggtacattcggcagtgtcggaaacatacaggaatgttcact
ggggcccagttgagcaccatatttggaaatattgaagacatttacaaattccaaagaaag
ttcttgaaggatctagagaggcaatacaacaaagaagagccccatttgagtgaaatagga
tcctgctttcttcagcatcaagaaggctttgctatctactctgagtactgcaacaatcat
cccagtgcctgcattgagatgtctaacctgatgaagcagggcaagtaccgccacttcttt
gaggcttgtcgcctgcttcagcaaatgattgacatcgccattgatggtttccttctcacg
cctgttcagaaaatctgtaaatatcccctgcagcttgcagaattactcaagtacaccact
caggaacatagcgactataatgatataaaggcagcatatgaagccatgaagaacgtagcc
tgcctgatcaatgaacgcaagcgaaggctagaaagcatagacaagatggcccgctggcaa
gtgtccattgtcaactgggaggggcaagacattttaggcagaagctcagaactaatccac
tcaggagagctgaccaaaatctccaagcaaggcaagagccagcaaaggactttctttctc
tttgaccaccagcttgtgttctgtaagaaagatctcttgagaagggacatgctgtactac
aagggccgggtggacatggatgagtttgaagtgctggacattgaggacggtagagaaaag
gacttcaatatcaatgtcaaaaatgctttcaaaattgtaaatagtgccacagaagaagtc
catctattttgtgggaaaaagccaggggacaagaagaggtggctggaggcctttgcaaat
gagaggaggcgagtgcaagaagacaaagaaatgggaatggagatctcagaaaaccaaaag
aaacaagccatgcaaaatgcacggaagtcaagacatggaaagatgaaaggtgtcggatac
agtgggtgcccgatgccgccccctcaccagagtttacatcctatccaccagcgtcacatc
acggtgcccactagcatcccacaacagcaggtctttgccctggcagaaccaaaacggaag
ccctctattttttggcacacttttaacaagctgaccccattcaagaaatga
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