Podarcis raffonei (Aeolian wall lizard): 128412724
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Entry
128412724 CDS
T09310
Symbol
BRCA2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03440
Homologous recombination
praf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128412724 (BRCA2)
03460 Fanconi anemia pathway
128412724 (BRCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128412724 (BRCA2)
03036 Chromosome and associated proteins [BR:
praf03036
]
128412724 (BRCA2)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128412724 (BRCA2)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128412724 (BRCA2)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128412724 (BRCA2)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
128412724 (BRCA2)
FA (Fanconi anemia) pathway
Downstream FA components
128412724 (BRCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
128412724
NCBI-ProteinID:
XP_053241997
LinkDB
All DBs
Position
4:29126066..29157357
Genome browser
AA seq
3068 aa
AA seq
DB search
METGLFSNTSDVMDKKNVTTPPKKPSFFEIFKAQCSESDLGPISINWFEELSSEAPLYNS
KRPEEPEHKTSDLDQSNFKTPQRKLPAKNQFASTPMIFNEPNKSVPFVSPIQELGQSKAE
AVLNGSFLHTPKIFEVQTPKSVFESLGAEADPEMTWSSSLATPPTLSPTVIIARGNHSVS
GTKQHNERIELVMHSLISKYGRSPKTDSMHMQSTSGTEDVCAETDSKIHNFERLLAGSFG
KNIFPSKLGEDYMLPNVPMDEDMNDGTENDLSECLASSKAFLRKPKRVKESKTFSDKAKR
EYQETDEDKIITKYGNSAKCHLQTIPNNGMQKHSVNQNSISKEEEIPSSLHCSWSQLDLS
GLDITQLEKTSSHCSDSSPMSYIKKCSEDRQLSVGKEYASTEMLESCIQNTSCLIKGNKL
LNTSSPETIPPPENSPLPVAVMSNKSPTLVKDCEAELASVINVSDSSSFIMENTTFTEAD
NSCCNYSRENGKKNYDPLGSVSTQAAGDVSGLTRAGLKSMTSLSRLKKRPKKFMYTINNT
PVHQEEGTTKRDGSSACLVPTCADLKSYDSEISATAIRNEERKEDIMHTNKHTLEEKQQV
ESNKNCILSNISHEAPLNYTERNFTDQLSILQQTDNRKGTIMPSSNISADQETESSESMS
HSVGHKINLQRENGERCVSLRCFSSLQEAVMEESTLGIHASKTGNQQAVLESATQKFWAS
GTQVAELGSQSKETPKPTVDESFKLIALEKKLDPSQHLQVDLAGNAEDSEQSWLGGISHS
RTEKFGGFRTASNKQIALSDCNIRKGKLLFKDIEDKFIEDFPSKGMQNISNENAQRSAEI
SSLGMNKLTENSSNFSHVSDLLGIQMNDAQIIFPKCANSAFQNVLSNQYPEGKLNLTASQ
EAEVTEISNILEETGSQFEFTQFKKHKMVAFNNADEMSGSFDKKDICAEVWKENDFEKGS
EEKVQRGHDLSPNKHIGTAEKSKIQIQSSEEATSIDTSTKQNNIFVPIVSAPSQFNLSDL
GSCGTAGGKEMSLYVDAIKKATKLVGDLDGVNEMLSPHQKILLRDCSNRCNNSWSNSNCM
KEREIDWHKRVKEVNAEYLMKKNTKDTIKFVKENTESKSKIVNYNEGSVQISSTTEVNLK
IIKKYSVCMTGNELSSFENNQSVLVSHHFVNCEETQCNYNLQEALSDLTCLAEVAKAEKR
STLNNAYGKENCDLNQEEEKVSNLESGFLQRFHTVADGNIFAGKSKKLHLLAASCTREEL
ETMPTSSGKTSPKSKKGDVSSVKENINFSETERSNHQEISEIRKEKQIIAMGFHTASGKQ
ITIANESLAKAKHLLSEDETVFPEMEEEVSNFMKPIIQEKINEKITKVSKEFEEGNEKHE
YLYPEGNFEDLPDLSSNTFKKTEDLDTIKELSLEMNASESDLVSHTRGEKVNEGLLTKNN
LACTKSKNISKIEFIDSAIDQHLPVEGSDISAMQGFQDLSSRNTGNNKSLDSSNLICSIT
SKASASDLKSEHSLLNHLPDECHKKNYVSENLTCISQEAAPSKNVFADNNVHTYDETCKN
ESSMIQKCDLRLFSTNVLQKYSASEASTSTSKHLKAKPVAFSTASGKAVEVSQEALKKAR
QVLHEDCYKSVKENMESQSKTNKHDLLESCSDTCGTGVCINSNNYSSAENNPVENIIAPQ
FFRAKECCADERTLKYTESMTLNTQPELCFQMHNKQSDTWTPNKQKCIKSDFITDNSGFF
STASGKPVQLSEQSLKKARLLFSEMEDNPSDHPSHVSNCDYSYGEVSSTGSKEAPKKDTM
LVSQGKRFSNTEANANIPCGFATASGKQVQISQKALQKVMGLLEEFDDVSSNSFSDAQRS
VEQGPIKVLAKEAIEQDEVISESKPQKKYKALHSATSTPNENKIIKNPLSIKIPVCMSHT
KKQKEISELEENFTCSKEIEALKITQPCQSRSKTKCAANCGTATEGNLDPQCRHYAQTPE
NYLEIEATESAKAFMEDDELPDAEVQKNKNSILSFEKPNNFLSYTRTGKRHMKEENTFGE
PPIKRKLRPEFERSEERNKASLKPSKSYPEGIVNDRKKFTYNIPLKPVVCGPLSKTLTEE
RKKAENTAKKPAKIFAPPFKTKANASEDKLGNSKESVLMDNKNINRMEELHLTEVNQSTT
ETEGNIFEDNNSMQISAPKSESRDTNSDLTKIIANLQYARNLQEIRIIKKQSQRICPQPG
SLYLVKISAPCRVPLKAAVGEKLPGSFTSDQLYAFGISKQCLKISSRNAEDFQFIIQDFF
SRDYFLEERGIQLADGGYLIPNDEGKAGKEEFYRALCDTPGVDPKLISKAWVYNHYKWIV
WKLAAMEVAFPQEFANKCLTPERLLLQLKYRYDVEVDQSHRSAIKRIMERDDVAAKTLIL
CITKIISLNTNMSQIRGDKSTAEDSKKDIAVVEVTDGWYGIKAVLDPPLQSLLCRKRLTV
GQKIVVHGAELVGSQEASTPLEAPESLMLKISANSTRRARWYAKLGYHRDPRPFSLSLSS
LLIDGGTVGCIDVIVQRLYPIQWMEKTAGSYVFRNCRAEEREAAKHAENRQKALEALLAK
IQAEFEKNEDGGKRVLRSRTLTRQQIRSLQDGAELYEAVLNAADPAYLESYFSEEQLKAL
NSHRQMVNDKKQAQIEAEFRKAVDSAEEENSSCRRDVTAVLKLRIVDYREEERRKEVVLN
IWRPSSDIFTLLREGGRYRVFQLSASQSKGKLETVNIQLTATKKTQYLQLPVSQETLSQV
YRPRECLRFSKLLEPSFHPTCSEVDLVGYIVSLRKGTAFSTLVYLSDENHHLIAVQIYTD
LKQLAIDDIIIPSTLISAINLQWRPEFRSDIPTLFAGDLSAFSSNPKESHLQGFFNELRN
TVENSSCFGKDAQCKLMNLLQTDDPQTFNLPQECGLDPISQKSDAGNKHSIVTPSSGLWH
QSPLSLGKLDSKPPVSLGSAKTAELQETPKNCKKRRAMDLLSRVPSPPPVKTNCIFISPS
LKRAFQPPRSSGTQLEKSLKRTACYNKKSALRGSSETGSPLENNFVADEELAMINTQALV
SSFPEDTG
NT seq
9207 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggtttatttagcaacaccagtgatgttatggataagaaaaatgttactaca
cctccaaagaagccatctttctttgaaatattcaaagcgcaatgtagtgaatcagattta
ggaccaataagtatcaactggtttgaagaactcagttcagaagctccactgtataactct
aaaagaccagaagaacctgaacataaaactagtgacctggaccaaagtaattttaaaaca
ccacagaggaagctgccagcaaaaaaccaatttgcatcaactccaatgatatttaacgaa
ccaaataaatctgtgccatttgtttctcctatacaagaattgggtcagagcaaagcagaa
gcagtgctaaatggaagttttctgcatacacccaagatttttgaggttcagacaccaaaa
tctgtttttgaaagcctaggagcagaagccgatcctgagatgacttggtcaagttcatta
gcaacgcctcctacactttctccaactgttataatagctagaggaaatcattcggtttct
ggaacaaagcagcataatgaaagaattgagttggtcatgcatagtctcatctccaaatac
ggtagaagtcccaagacagatagtatgcatatgcagtccacatcaggaacagaagatgta
tgtgcagaaactgacagcaaaatccacaattttgaaaggttattagctggatcctttggt
aagaacatatttcccagtaaattaggagaagattatatgctaccaaatgtaccaatggat
gaagatatgaatgatggaacagagaatgatctttctgaatgccttgcaagcagcaaagcc
tttcttagaaaaccaaaaagagtcaaggaaagtaagacattttctgataaagcaaaacgt
gaatatcaagaaactgatgaagacaaaattataacaaaatatggaaattccgccaaatgt
cacctgcagactattccaaataatggaatgcaaaagcactctgtgaatcagaatagcata
tcgaaagaagaggaaataccatcatctttgcattgctcatggtctcagctggacctatct
ggacttgacataacacagcttgaaaaaacgtcctcacactgttctgattcatctcctatg
tcatatatcaagaagtgttctgaagataggcaactatctgttggcaaagagtatgctagt
actgaaatgctagaatcgtgtattcaaaacacatcatgcctaataaaaggtaacaagctg
ctaaacaccagttctccggaaacaataccaccgcctgaaaactctccattgcctgttgcg
gttatgagcaataagagcccaacattggtgaaagattgtgaggctgagctggcatctgtc
ataaatgtttcagacagtagttccttcataatggaaaacacaacttttacagaagctgat
aatagttgctgtaattactcaagagaaaatggaaaaaagaactatgatcctctaggtagt
gtttctacccaagctgctggtgatgttagtggacttacaagggctgggttgaaaagtatg
acctcactttctcgtttgaaaaaacgacctaaaaaatttatgtatacaataaataatacc
cccgttcaccaggaagaaggaaccacaaagagagatggctcctctgcttgccttgtgcca
acttgtgcagatttaaaatcttacgactctgaaatttctgcaacagccataagaaatgaa
gaacgaaaggaagacattatgcacactaacaagcacacacttgaagagaaacagcaagta
gagtctaataaaaactgcattcttagtaacatttcccatgaagctccactcaattacaca
gaacgtaattttacagatcagttgtcaatacttcaacagacagacaacagaaaaggaaca
attatgccttctagtaatatatctgctgatcaagaaacagagtcaagtgaaagcatgtcc
cattcagtgggtcacaagataaatttacaaagagagaatggtgaaagatgtgtcagtctt
agatgtttcagttcattgcaagaagcggtgatggaggaatctacattgggaatacatgca
tcaaaaactggaaaccagcaagcagtcttggaatcagctacacaaaaattttgggcaagt
ggcactcaggtggctgaacttgggtctcaatcaaaggaaacaccaaaacctactgtagat
gaatcttttaagcttatagcattggagaaaaagttagacccaagccagcatctacaagta
gacttagcaggaaatgctgaagatagtgagcagagctggttaggaggtatcagtcatagc
agaactgaaaagtttggtggcttcagaacagcatccaataaacagatagcattgtctgac
tgcaacattagaaaaggcaagctattgttcaaagacatagaagataaatttattgaagat
tttcctagcaaaggaatgcaaaatatttcaaatgaaaatgcacagagaagtgctgagata
tcttcacttggaatgaacaaactgactgaaaattcatctaatttttcacacgtgtctgat
ctgctcggtattcagatgaatgatgcccaaattattttccccaagtgtgccaattctgct
ttccagaatgtgctgagtaatcaatatcctgaaggaaaactaaatttaacagcaagccaa
gaagctgaagttactgaaatttctaatatactagaagaaacaggtagtcagtttgaattt
acacagttcaaaaagcataagatggtggcattcaataatgctgatgagatgtctggaagc
tttgataaaaaagatatatgtgctgaagtttggaaagaaaatgattttgagaaaggctct
gaagaaaaggttcaaagaggccatgatctgtctcccaataaacatataggcacagctgag
aaatctaagatacagatacaaagtagtgaagaagctacatccattgatacaagcacaaaa
cagaacaatatttttgtcccaattgtttcagcaccatcacaattcaatttgtctgatctg
gggagctgtggtacagctgggggcaaagagatgagcctttatgttgatgctataaagaaa
gctacaaaattagtcggcgatctggatggagtgaatgaaatgcttagccctcaccaaaaa
atattgctacgcgattgttcaaataggtgcaacaatagctggagtaattccaactgcatg
aaagagagagagattgattggcataagagggtcaaagaagtaaatgctgaatatttgatg
aaaaagaatacaaaagatacaattaaatttgttaaagaaaatacagaaagtaagtcaaaa
attgtaaattataatgaaggcagtgttcagatttctagcactacagaagttaaccttaaa
attattaaaaaatactctgtctgtatgacaggaaatgaactgtcttcctttgaaaataat
caaagtgtattagtctcacatcactttgtaaactgtgaagaaactcagtgtaattataat
ttgcaagaagctttgtcggatctaacatgtttagctgaagttgctaaggctgaaaaaaga
tccaccttgaataatgcatatggaaaagaaaactgtgatttaaatcaagaggaggaaaag
gtgagcaatctagaaagtggttttctacagagatttcacactgttgctgatgggaacata
tttgcaggaaaaagtaaaaagcttcatttgttggctgcctcctgtacaagagaagaacta
gagactatgccaacttccagtgggaagacaagccctaaaagcaaaaagggagatgtcagt
tctgtaaaagagaatattaacttcagtgaaactgaaaggtccaaccatcaagaaatctct
gaaatcagaaaagagaagcaaattattgcaatgggttttcatacagctagtggtaagcaa
attacaattgctaatgaatccttagctaaagcaaagcatcttctttcagaagatgaaact
gtttttccagaaatggaggaagaggttagtaattttatgaagcctataattcaggagaaa
ataaatgagaaaattaccaaagttagcaaggaatttgaagaaggaaatgaaaaacatgaa
tatctgtatcctgaaggtaactttgaagatcttccagatttgtcctcaaacacttttaag
aagactgaggatcttgacactattaaagaactttctttggagatgaatgcatctgaatca
gatttagtatctcatactagaggggagaaagtgaatgaaggcttgttgacaaagaataat
ctggcatgtacaaaaagcaaaaatatttcaaaaattgaatttattgactctgctattgat
cagcatttgcctgttgaagggtcagatattagtgcaatgcaaggttttcaggacttgtca
tctagaaatactggcaataataaaagccttgattcctcaaacttaatttgcagtatcact
tcaaaggctagtgcctctgatttaaagagtgaacattctttgctcaaccatttaccagat
gaatgtcataagaaaaattatgtgtcagagaatttaacttgtatttctcaagaagcagca
ccatcaaaaaatgtgtttgctgacaataatgttcacacttacgatgaaacttgtaaaaat
gagagtagcatgatacagaaatgtgacttaagattgttcagtaccaacgtcttgcagaaa
tattcagccagtgaagcatcaacttcgacttcaaaacatctgaaggctaagccagttgca
ttcagtacagcaagtggtaaagctgttgaagtttctcaggaagcattaaaaaaagccagg
caagtgcttcatgaagactgctataaatctgtaaaagagaacatggaatctcaatctaaa
acaaataaacatgaccttttagaaagctgttctgatacctgtggcactggagtgtgtatc
aattctaataactactcatctgcagagaacaatccagtggaaaatataattgcacctcag
ttttttcgagccaaagaatgctgtgcagatgagcgcacattaaagtatactgaatctatg
accttgaacactcaacctgagttatgctttcagatgcataataagcaatctgatacatgg
actcccaacaaacagaagtgtatcaagtcagattttattactgataactctgggtttttt
agcacagctagtggaaaacctgtccagttatctgaacagtcattaaagaaagcaagactg
cttttttctgaaatggaagataatccatcagatcacccgagtcatgtctctaactgtgat
tatagttatggtgaagtatcttctactgggagcaaagaagctccaaagaaagacacaatg
cttgtatctcaagggaaaagattttcaaatactgaagcgaatgcaaatattccctgtggc
tttgccacagcaagtggaaaacaagtacaaatttctcaaaaggctctccagaaagttatg
ggtctcttagaagaatttgatgatgttagtagtaatagtttttctgatgctcaacggagt
gtggagcaaggtcctataaaagttcttgctaaagaggccatagaacaggatgaagttatt
tcagagtctaaaccacaaaagaaatataaagcacttcattcagccacaagtacacctaat
gaaaataagattataaaaaacccattgagcattaaaatacctgtgtgcatgtctcatact
aagaagcaaaaagaaatatctgagttagaagaaaactttacatgttcaaaagaaattgag
gctttgaagataacccaaccatgccagagtagaagcaaaactaaatgtgcagcaaattgt
ggtactgcaacagaaggaaatctggatcctcaatgtcgtcattatgcacaaactccggaa
aattacttggaaatagaagctacagaaagtgccaaagctttcatggaagatgatgaactt
cctgatgcagaagtacagaaaaataaaaattccatattgagttttgagaaacctaataat
tttctgtcatatacaagaactggaaaaaggcacatgaaagaagaaaacacttttggggaa
cctcctattaaaagaaaattgcggcctgagtttgagcggtcagaagaacgtaacaaagca
tctttgaaaccttcaaaaagttatccggagggtatagtgaatgacagaaaaaagttcacc
tacaatattcctttaaagccagtggtctgtggccctttaagtaagaccttaactgaggaa
aggaagaaagcagaaaatacagcaaagaaacctgccaaaatctttgcaccaccttttaaa
acaaaagcaaatgcttctgaggataaactaggtaacagcaaagaatctgtcttaatggac
aacaaaaatattaatagaatggaagagcttcatcttacagaagttaaccagagcactact
gaaacagaaggcaatatctttgaagataataattccatgcaaatatcggctccaaaatca
gaatccagagatacaaattcagatttaacaaaaataatagcaaatcttcaatatgcaaga
aatctacaagaaatcagaattataaagaaacaaagccagagaatttgtccacagccaggc
agcctgtaccttgtgaaaatatctgctccttgcagagttcctctgaaagcagcggtggga
gagaaattgcctggttctttcaccagcgatcagttgtatgcatttggcatttccaagcag
tgcctaaaaataagtagcagaaatgcagaagattttcaatttatcatccaggattttttc
agtagagattattttctagaagaacgtggaatacaactggcggatggtggatatcttatt
ccaaatgatgagggaaaggcaggaaaagaagaattctacagggctttgtgtgatacacct
ggcgtggatcctaagctaatttcaaaggcttgggtctacaatcattataagtggattgtg
tggaaactagcagctatggaagttgcatttccacaggaattcgccaataaatgtttgact
ccggaaagactactacttcagctaaagtacaggtatgacgtggaagttgaccaaagtcat
cgctcagccatcaaaaggataatggaaagagatgatgtcgctgctaaaactctcatactg
tgcatcactaaaataatatcattgaacacaaatatgtctcagatccgtggtgataaaagc
actgctgaggacagcaaaaaagacatagcagtggttgaagttacagatggctggtatgga
atcaaggctgtcttggaccctcccctccaatcactattgtgtagaaagaggctgactgtg
ggccaaaagattgttgtacatggagcagaacttgtgggttctcaggaggcaagcactcca
ctggaagcgccagaatctcttatgctgaagatttcagctaacagcactcgacgcgcgcga
tggtatgccaaattaggataccatcgggatccccggccattctctttgtctttgtcatca
ctccttattgatggtgggactgttggatgcattgatgtcattgttcaaagactttatccc
atacagtggatggaaaaaacagcaggttcctatgtgtttcgtaactgtcgagctgaagaa
agagaagctgcaaagcatgctgagaatcgacaaaaagccctggaagcattgcttgcaaaa
atacaagctgaatttgaaaagaatgaagatggcggcaaaagagtactgcgatcccgcacg
ttaaccagacaacagattcgctctctgcaagatggggcagaactttacgaggcagttctt
aacgctgctgatccagcttacctggaaagttatttcagtgaggagcagttaaaggccttg
aacagccacagacagatggtaaatgataaaaagcaagcacagatagaagccgaattcagg
aaggcggtggattctgctgaggaggaaaacagttcctgcagaagggatgtaaccgccgta
ctcaagctacgaattgtggattacagagaagaagaaagaagaaaagaagtagtattgaat
atctggcgcccatcttcagacatttttaccctcctaagggaaggaggtcggtatagagtc
ttccaattatctgcatcccaatccaaagggaagttggagactgtcaatatacaattaaca
gctaccaagaaaactcagtatctgcagttgccagtgtctcaagaaaccctgtcacaagtt
tacaggccaagagagtgcctgagattcagcaagctgttggaaccatctttccatcctacc
tgttcggaagtggatttggtgggatatatagtttctctaagaaaaggaacagctttctct
acactggtgtatctgtcagatgagaatcatcatttaatagcagtccagatctatacagat
cttaagcagctggctattgatgacataattattccttctacgttgatctctgcaatcaac
cttcagtggcgacctgaatttagatcagacatccccacattatttgctggagacctttct
gcattctcctcaaatccaaaagaaagtcatctccaaggattttttaatgaactgagaaat
actgtagagaatagcagctgctttggcaaagatgcacaatgcaaactgatgaatttgcta
caaacagatgacccacaaacatttaacttgccccaagaatgtggcttggatcccatttct
cagaaatctgatgcaggaaataaacattctattgtaactcctagcagtggactatggcat
cagagtcctttgtcacttgggaagctagattcaaagccaccagtatctctagggtcagca
aaaacagcggaactacaagaaacccctaagaactgtaagaaaagaagagcaatggacctg
cttagtagagtaccttccccaccaccagtgaagaccaactgtatatttatttctccatct
ctgaaaagggcatttcagcccccccgaagttccggcactcaacttgaaaagtcactgaag
agaacagcatgttataataaaaaatctgccctgagagggtctagtgagactggttctcct
cttgaaaataattttgttgctgacgaggagcttgcaatgataaatacacaagccctcgta
agtagttttccagaagatacaggttga
DBGET
integrated database retrieval system