Podarcis raffonei (Aeolian wall lizard): 128412943
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Entry
128412943 CDS
T09310
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03420
Nucleotide excision repair
praf04115
p53 signaling pathway
praf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128412943 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
128412943 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128412943 (DDB2)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128412943 (DDB2)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128412943 (DDB2)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128412943 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
128412943
NCBI-ProteinID:
XP_053242520
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All DBs
Position
1:complement(49920929..49947789)
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AA seq
517 aa
AA seq
DB search
MAPGKQSRDKKLQKSPECPSEKEAKTTGKRKRDTRELENEPFANKLLVKKAPKILEKMGE
AFHGSMVRKTGVFFNQRETQKNIVHYLHQNMLGGAIGTQLRKCLQVPFVRSLYSYRLFRT
ASPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEMLNKSCFIKGKGPGDSLGGMKFSP
LESANLYVASGDGTLSLQHLEGRPAQVISHTPVCDHEFHDVCFWYCSVDVSATCRTVATG
DNVGNVVLLSTEGEKVWNLKLHKKKVTHVEFNSHCDWLLATASVDQTVKIWDLRNIKDKS
SSLHVLPHDKPVNAAYFSPTDGAKLLSTDQYNEIRVYSSSDWSKPQHLISHPHRQFQHLT
PIKATWHPRYDLIVVGRYPDPRFPSYTVGELRTIDIFDGNSGEMVCQLHDPNASGIISLN
KFNPMGDTLASGMGFNILVWSREEMVTQNQECLMQSMTEQGMRCRRLSRLGTPKQRQSTT
GASKLKTKLFSFELESTKTKGKEHKLQEKKRGKYSED
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgggaagcagtcaagggacaagaaactgcaaaagtctcctgagtgtccatca
gaaaaagaggcgaaaacaactgggaaaaggaagcgagacaccagagagctggaaaatgag
ccatttgcaaataaattacttgtgaaaaaagcccccaagattctggagaaaatgggagaa
gctttccatggatccatggtcagaaaaacaggggtgttcttcaatcagcgagaaacacag
aagaacattgtccattatctacatcagaatatgctgggtggtgctattgggacacagctc
agaaagtgtcttcaggtgccctttgtacgttccctctattcgtaccgcctgttccgcaca
gcaagtccctttgacaggagggttacatgcttggaatggcacccaacgcaccccagcaca
gttgctgtgggctccaaaggtggagacatcatcctttgggactatgaaatgcttaataaa
agctgcttcataaaagggaaaggcccaggagactctcttggaggcatgaaattcagccca
ttggagtcggcaaatctttatgtggcttcaggggatggtacccttagtctacagcacctt
gagggccgaccagcgcaagtgatctcccacaccccagtctgtgaccatgaattccatgat
gtttgtttctggtactgcagtgttgatgtatctgcaacttgccggactgtggcgacaggt
gataatgtgggcaacgtagttctgctcagtactgagggcgaaaaggtatggaacctgaaa
ctgcacaaaaagaaagtgactcacgtggaattcaattctcactgtgattggctcttagct
acagcctctgtggatcagacagtaaagatctgggatctgagaaacattaaggacaagtca
agttctcttcatgtacttccacatgataaacccgttaatgcagcttatttcagcccaacg
gatggggctaagctactgagtactgaccagtacaatgaaatccgggtctattcctcttct
gattggtccaaaccccagcatttgatttcacatccccatcggcagttccagcaccttaca
cctatcaaggcgacatggcatcctcgctatgacctcattgtggtgggtcgttacccagac
cctaggttcccaagctacacagtgggcgagctgagaaccattgacatatttgatggaaac
agtggggagatggtttgccagctgcacgatccaaatgcatctggaattatctcgctcaat
aagttcaaccctatgggagacacactggcttctggaatgggttttaatattctggtctgg
agtcgggaggaaatggtaacccagaatcaggagtgtctcatgcagtccatgacagagcag
ggaatgagatgcagacgcttatctcgactggggacaccgaaacaaagacaatcaaccaca
ggagcaagcaaacttaaaactaaactatttagttttgaattagagagcaccaaaacaaag
ggcaaagagcataaattacaagagaagaagagaggaaaatattcagaggactga
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