Podarcis raffonei (Aeolian wall lizard): 128412975
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Entry
128412975 CDS
T09310
Symbol
PAXBP1
Name
(RefSeq) PAX3- and PAX7-binding protein 1 isoform X1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128412975 (PAXBP1)
Spliceosome [BR:
praf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128412975 (PAXBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
128412975
NCBI-ProteinID:
XP_053242580
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All DBs
Position
4:complement(53482539..53510132)
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AA seq
965 aa
AA seq
DB search
MFRKARRVNVRKRNESEEDDEERDESPPQQQQPPAPPPGGDGPSGEADLLPGPKPPLLPL
PTGCVPLACPGGGGGGGFGFGGPEAVGRGGGAGLPAPQLQPPPPVLIPPPPPPSQQTPPG
NNGLVPAASKLKERKNKNKEEPPPPPPRGSLSLLSFQDEEEEAEEVFKVKKSSYSKKIVK
LLKKEYKEDLEKSKTKPETNSLADAEQSADKTGQIKDAIQEDGAANSEQGEEEMEVESEK
EEEKPKAVGAFSSTLSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFLPLDSDPGKGRL
VREDENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDEALIAGEQDEELSRWE
QEQIRKGINIPQVQASQPAEVNNLYYQNTYHTMPYGSSYGIPYTYAAYGSSETKSHKTDN
TIPFKTPSNEMTPVTIDLVKKQLKDRLDSMREFHKANQQQHEKHLQRREESTKAIERLEG
SSGGVGERYKFLQEMRGYVQDLLECFNEKVLLINELESAMHQLYKQRASRLVQRRQDDIK
DESSEFSSHSSKALMAPNLDSFGRDRTLYQEHVKRRTAEREARRARRRLAREQSGKMADH
LEGLSSDDEETSTDTTNFNMERDRILKESSKVFEDVVENFSSIDAIKSQFEAWRFKYSSS
YNDAYIGLCLPKLLNPLIRLQLLTWNPLEDKCQDFESMLWFESLLFYGCEEYDQEKDDAD
VSLLPTIVERVVLPKLTVLAENVWDPFSTTQTSRMVAITQKLVNGYPSVVHAENKNTQTL
LKGLLLRMRRTLDDDVFMPLYPKSVLENKNSGPYLFFQRQFWSSVKLLGNFLQWHGILSN
KTLQELSIDGLLNRYILMAFQNSEYGDDSIKKAQSVISCFPKQWFTNLKGSKTISHLENL
CRYLVHLADTVYRNSIGSSDVEKRNARENIKQIIKLLSSIRALDHAATVANDHNVKELKN
LSEGK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaggcgcggcgcgtgaacgtgcggaagcggaacgagtctgaggaggacgac
gaagagcgagacgagtcgccgcctcagcagcagcagccgccggcaccgccgccaggaggg
gatgggccttctggagaggccgacctgctgccgggtccgaagccgccgcttctgccgctc
ccgacgggctgcgtccccctagcctgtcccggtggcggtggcggcggcggcttcggtttc
ggcggccctgaagcggtcggccgaggcggcggtgccggcttgccggccccgcagctccag
ccgccgccgcctgttcttatccctcccccgccgcccccttcgcaacagacgcccccgggg
aacaacgggctggtgccggcggcttctaagctgaaggagcggaagaacaagaacaaggag
gagccgccgccgcctccgccacgcggaagcctcagcctcctcagcttccaagacgaagaa
gaagaagcagaagaagtttttaaagtgaagaaatcaagttacagcaagaagatagtaaag
cttcttaagaaagaatacaaagaagaccttgaaaaatcgaagacaaaaccagaaaccaat
tctttagcagatgccgaacagtctgctgataagacaggacagattaaagatgcaattcaa
gaagatggggctgcaaacagtgaacaaggagaagaggagatggaagttgaaagtgagaaa
gaagaagaaaagccaaaagctgtaggagcattttcaagtactttgtcttctctgaatgtt
ctgcgtccaggagaaattccagatgctgcctttattcatgctgctaggaaaaagcgccaa
atggctcgtgagcttggggactttttgccacttgacagtgatccagggaaagggcgcctt
gttagagaagatgaaaatgatgccagtgacgatgaagatgatgatgagaagcgaagaata
gtcttttctgtgaaagagaagtcccaaaggcaaaaaattgcagaggaaataggtatcgaa
ggaagtgatgatgaagccctgattgctggggaacaggatgaagaactcagtcgatgggag
caagaacagatacgtaaaggcattaatatacctcaggttcaagcaagtcaacctgctgaa
gtgaataacctgtactaccagaatacttaccatacaatgccttatggttcatcttatggc
attccttacacatatgctgcttatggatcatcggagacaaaatctcacaaaacagataat
acaatacctttcaaaactcccagtaatgagatgactcctgttactattgatttggtaaag
aaacagcttaaagacaggttggactcaatgagagaatttcacaaagcaaatcagcagcaa
catgagaagcatctgcaaagacgtgaagagtctaccaaggcaatcgaaagattggaaggg
tcttctgggggtgttggtgaacggtataaatttctgcaagaaatgcgagggtatgtccaa
gacttgcttgagtgtttcaatgaaaaggtgctcctgattaacgaacttgaatcagcaatg
catcagctgtacaaacagcgagcttcccgccttgtccaaagacgacaagatgatattaaa
gatgaatcttcggagttttcaagccattcaagtaaagccctgatggcaccaaaccttgat
tcttttggacgagacagaacactgtaccaagaacatgttaaaaggcggactgcagaaaga
gaagcaagaagggctcgtcgtagacttgccagagagcaatctgggaagatggctgatcac
cttgaaggcctttctagtgacgacgaagaaacttcaacagatactacaaacttcaatatg
gaacgagatcgcattttgaaggagtccagcaaagtttttgaagatgtggtagaaaacttt
tcatccattgacgccattaagtcgcagtttgaagcatggcgtttcaagtattcgtcttct
tacaatgatgcttatattggcctttgtttacctaagctattaaatcctttaataagacta
cagttacttacctggaaccctttggaggataagtgccaagactttgagagtatgctgtgg
tttgaatctttgctattttatggatgtgaagaatatgaccaagagaaagatgatgcagat
gtttcactattgcctactattgtggaaagagtggttctgcctaaattaacagtacttgct
gaaaatgtatgggaccctttttctacaacacagacatctaggatggtagccattacccag
aaactagtaaatggttatccatcagtggtacatgcagaaaacaaaaacacacagacatta
ctaaaaggcctcttgcttagaatgaggagaacattagatgatgatgtattcatgccactt
tatcccaaaagtgtcttagaaaacaagaactctggtccttacttgtttttccagcggcag
ttttggtcttcagtgaagttattaggaaactttctgcagtggcatggaatcctttccaac
aaaaccttacaagagttatcaatagatggattgctaaatagatacattcttatggctttc
cagaattctgagtatggagatgatagcattaagaaagctcaaagtgtaatcagttgtttc
cctaaacagtggttcactaatcttaaaggaagtaagacaatatcacatctagaaaacctc
tgtagatatcttgttcatcttgctgatacagtatacagaaatagcattggaagctctgat
gtagaaaaaagaaatgcaagggagaatataaaacagataataaaacttctatcaagtatt
cgagcactggaccatgctgcaacagttgcaaatgatcataatgtgaaagagttaaaaaat
ttaagtgaagggaaataa
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