Podarcis raffonei (Aeolian wall lizard): 128413011
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Entry
128413011 CDS
T09310
Symbol
CHAF1B
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128413011 (CHAF1B)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128413011 (CHAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
CAF-1_p60_C
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_Aladin
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
NBCH_WD40
Tricorn_2nd
Beta-prop_RIG_2nd
eIF2A
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_ELP1_1st
Beta-prop_Nup120_160
Ge1_WD40
CzcB_N
Motif
Other DBs
NCBI-GeneID:
128413011
NCBI-ProteinID:
XP_053242661
LinkDB
All DBs
Position
4:54963433..54977867
Genome browser
AA seq
565 aa
AA seq
DB search
MKVFTCEIAWHNKEPVYSLDFQHGTDGKINRLASAGVDTAVRIWKVEKGPDGKAIVEFLS
NLARHTKAVNVVRFAPNGEILASGGDDAAILLWKLNDNKEQEPTVFQDGDDDNQLNKENW
TVIKTLRGHLEDVYDICWTPDGNFMASASVDNTAIMWDVSKGQKVSIFNEHKSYVQGVTW
DPAGQYIATLSCDRVLRVYNTQTKRVAFNVTKMPSGRGSEGEVKSYRMFHDDSMKSFFRR
LTFTPDGSLLLVPAGCVESGENVTNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPIYFE
LRSSLNKEEASKKTGLINLPYRMVFAVASEDSVLFYDTEQSFPFGYVSNIHYHTISDISW
SSDGSFLAISSTDGYCSFVTFEEDELGIPLKEKPAVSAGTPSTAEKKMKKGQSSSVISPV
PKPVDGTPPNKTMDPGSPAVQCKTLINSKELPSTPIAVRKPPVASLEEKKPMQPSSSKAN
QPRRVTLNTLQAWSKAPRRVALIPLNADTQDSSPSDPISTTASTETVQHERPSPPEDPLQ
NPPPPKRLKSDETSNSELTENENKM
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattcacttgtgaaattgcatggcacaataaagaaccagtgtacagcttagac
tttcaacatggcactgatggaaaaatcaatagattggcttctgctggagtggacactgct
gttcgtatatggaaagtagaaaagggaccagatgggaaagcaattgtggaattcttgtcc
aatttagctcgccataccaaagctgtgaatgttgtgcgttttgctcccaatggtgagatt
ctagcatctggtggagatgatgctgcgattttgttgtggaagttgaatgataacaaagag
caagagccaacagtatttcaggatggtgatgatgataaccaactaaacaaggagaactgg
acagtaattaaaactttaagaggtcatttggaagatgtgtatgatatttgctggacccct
gatggaaacttcatggcatctgcatcagttgacaacacagctataatgtgggatgtcagt
aaagggcaaaaggtttctatttttaatgaacacaaaagttacgttcaaggagtaacctgg
gaccctgcaggacagtatattgcaactcttagttgtgatagggttttgagagtatataat
acgcagactaagagagtggcatttaacgttaccaaaatgccgtcgggcagaggatctgaa
ggagaggtaaaaagctatcgaatgtttcatgatgacagcatgaagtcattctttcggagg
ctcacttttacacctgatggctctctgctccttgttcctgcaggctgtgtggaatcagga
gaaaatgtaacaaacactacttacgttttttccagaaaaaatctgaaaaggcctatagct
catttaccttgtcccggaaaggcaaccttagccgttcgttgctgcccaatctactttgag
ctcaggtcttcacttaacaaagaagaagcttccaagaagactggtctgataaatctaccc
taccggatggtttttgctgttgcttcagaagattctgtgctcttctatgacacagagcaa
tcctttccttttggttatgtatctaatatacattaccatactattagtgacatttcgtgg
tctagtgatggatcctttcttgctatttcttctacggatggatattgttcttttgtgact
tttgaagaagatgagcttggaatacccctgaaagagaagccagctgtaagtgccgggacc
cccagcacagctgagaaaaaaatgaaaaagggccagtcttctagtgttatctccccagtt
ccaaaaccagtggatggcactcctcctaataagaccatggatcccggcagcccagctgtg
caatgcaagactctgataaacagcaaagagttgccctcaacacctattgcggttagaaag
cccccagtggcctctttggaagagaagaaacctatgcagccatcaagctcaaaagcaaac
caacccaggagggttacccttaataccttacaagcatggagcaaggcacccaggagagtt
gccttaatccctctaaatgcagacacgcaagactcatcgccttccgatcccatctctaca
actgcttccacggaaactgttcaacatgagaggccatcaccacctgaagaccccttgcaa
aatccaccacctcctaagcgtcttaaatctgatgaaacttccaactctgaattaactgaa
aatgaaaataaaatgtaa
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integrated database retrieval system
