Podarcis raffonei (Aeolian wall lizard): 128413217
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Entry
128413217 CDS
T09310
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128413217 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128413217 (MID1)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128413217 (MID1)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128413217 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
128413217
NCBI-ProteinID:
XP_053243219
LinkDB
All DBs
Position
4:69229184..69427448
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AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLNQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSSEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQSAKNITERVAMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFVVKAINQAGSRNSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIQIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHL
DSTEHMP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaggatccg
ctgctgctgccttgcgctcacagcctctgcttcaattgtgcgcatcgcatcttggtctcc
cactgtgccaccaacgaatcagtggaatctatcaccgccttccagtgccctacttgtcgt
tatgtcatcacccttaatcaacgtggtctagacggactcaagcgcaacgtcacgctgcag
aatatcatcgacaggtttcagaaagcttcggtgagcgggcccaattctccaagtgaaact
cgccgagagcgagctttcgatagcaacagcatgtcctccagtgaaaaagttctctgccag
ttctgtgaccaggatcctgctcaggaagcagtaaagacctgtgtaacgtgtgaggtttcc
tactgtgaggagtgcttaaaagcaactcacccaaacaagaagccatttactggccaccgt
ttgattgaacctattcccgactctcatatcagaggattaatgtgtctggagcacgaggac
gagaaagttaacatgtattgtgtgactgatgaccagttaatctgtgccttgtgtaaactg
gttgggaggcatcgtgatcaccaggtggcagctctcagtgaacgctatgacaaattaaag
caaaacttggaaagtaatctcaccaaccttatcaagagaaatactgaactggaaacactt
ttggcgaaattaattcaaacttgccaacatgtggaggtgaatgcgtcccgacaagaaact
aagctgatggaggaatgtgacctgcttattgaaataattcaacaaaggcgtcaaattatt
ggaaccaaaatcaaggaagggaaggtggtgagactgaggaaactcgcccagcagatagct
aattgcaagcagtgcattgagcgctccacttctctgatctctcaagctgagcaatctctg
aaggagaatgatcacgcacgcttcttgcagtctgctaaaaacataactgaaagagtcgcc
atggcaacagcatcttcccaggttctaattcctgaaattaatctcaatgacacttttgac
acctttgcgctagattttaccagagagaagaaactactggaatgccttgattatcttaca
gctccaaatcccccaaccattagagaagagctttgtacagcttcttatgacacaatcaca
gtccactggacatcagatgatgaattcagtgtggtctcctatgagttgcagtataccatt
ttcactgggcaagctaatgtagttagtctgtgtaattcggctgacagctggatgattgtt
cctaatatcaagcaaaaccactacacggtgcatggcctgcagagtggcaccaagtacata
tttgttgtgaaggccattaatcaggctggcagccgaaacagtgagccaggaaagctgaag
acaaacagccagccatttaaactggatcccaagtctgcccacaggaagctgaaagtatct
catgacaacttgacagtggagcgtgacgaaacctcttctaaaaagagccacacacctgag
cgctttaccagccaaggcagctacggggtagcgggcaatgtatttattgacagtggacgg
cattactgggaagtggttatcagcgggagcacatggtatgccattggcatttcttataag
tcggcgccaaaacacgaatggatcgggaagaattctgcctcgtgggttctttgccgctgt
aataatacgtgggtagtgagacataacagcaaagaaattcagatagagcctgcaccccac
cttcgccgtgttggaattttgttggactatgacaatggttccttggccttttatgatgct
ttgaactccctgcatctttacacgtttgacattacatttgcacagcctgtgtgcccaacg
ttcactgtctggaataagtgtttgacaataataacggggcttcccatcccagaccactta
gattccactgagcatatgccatga
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