Podarcis raffonei (Aeolian wall lizard): 128413236
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Entry
128413236 CDS
T09310
Symbol
ZBED1
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128413236 (ZBED1)
04121 Ubiquitin system [BR:
praf04121
]
128413236 (ZBED1)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128413236 (ZBED1)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128413236 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
128413236
NCBI-ProteinID:
XP_053243259
LinkDB
All DBs
Position
4:72405830..72444521
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AA seq
709 aa
AA seq
DB search
MSEEPKGWDCGQEAMENKSLETSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCIMQWKKIY
CRICMAQIAYSGNTSNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKLKPESSQQAV
QDTLIMKAGHSYENKKHQELTLAVISLICEGLYPPSIVDEPTFKNLLRTADPRYELPCRK
YFCTKAIPEKYMAVRDVVLKELTDIPWCGISSDMWRSGNQNRSYVTLSVHFLSSGASSCL
AVNSRCLKTFEVPEENTAETITRVLYEIFIEWGINTKVFGATTDYGKDIVKACSLLDIPV
HMPCLGQTFNAGIQRAFQLPKLCAFLSRCRKLVEYFQQSSVAMCMLSEKQKQQNTPPCML
VSDRVSWWGSTLAMLQRLKEQQFVIAAVLVEDSNNHHLMLEANEWNTIEGLVDLLQPFKQ
VAEMMSASKYPTISMVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHAPDID
MFLNVATFLDPRYKKLPFLSAFERQQVENRVVEDAKSLLEEEKENTLRPEEKFFALSEEP
PVKKMAISSIPPPTSAINNMLAEIFCQTGGAEDQEEWHAQIIEELSNFKSQKVLGLNEDP
LKWWSDRLALFPVLPKVLQKYWCIVATRVFPERLFGSSANIVSAKRNRLAPAHVDEQIFL
YENSRNGSEAEPEEEDEGEWGLDQEHITSLSDTTNVNSSFFNMRDSGFM
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaccaaaaggttgggactgtggccaagaagcaatggagaataaaagtttg
gaaacttccccgtcagacctaaagttagtggcccacccaagagcaaagagcaaagtgtgg
aagtactttggctttgataccaatgcggaaggatgtataatgcagtggaagaaaatctac
tgccgcatttgcatggcacagatagcctattcgggaaacacgtccaacctctcttaccac
cttgaaaagaatcatccagacgagttttgcgagtttgtgaaaagcaacactgagcaaatg
agggaggcctttgccacggcgttttcaaaactgaagccagaatcgtctcagcaggctgtt
caggacaccttaattatgaaggcaggtcacagttacgagaataaaaagcaccaagagcta
acattggcagtgattagcttaatatgtgaagggttatatcctccttccattgtagatgag
ccaaccttcaagaatcttttaagaacggccgaccccagatatgaacttccttgtagaaag
tatttctgcacaaaagcaattcctgaaaaatatatggctgtcagggatgttgtgctaaaa
gagctgactgatatcccgtggtgcggcatatcctctgacatgtggagaagcgggaaccag
aacagatcctacgtaacgctgtcagttcattttctcagtagcggcgcttccagctgcctg
gctgttaattcccggtgtttaaaaacatttgaagtgcccgaggaaaacaccgcagagaca
attacgcgagtactttatgagatattcattgaatggggaatcaatacaaaagtttttggt
gctacaacagattatgggaaagacattgtgaaagcttgctctcttctcgacattccagtg
cacatgccttgcttagggcaaacttttaatgcaggcatacagcgagcttttcagcttccg
aagctgtgtgctttcctgtcgaggtgtcggaagctggtggaatattttcagcagtcttca
gtagccatgtgcatgttgagcgagaagcagaagcagcagaacactccgccctgcatgctt
gtgagcgatcgtgtttcctggtggggaagcactcttgccatgctgcagcgactcaaggag
cagcagttcgtcattgccgcagttcttgtggaggacagcaataatcaccacctgatgctg
gaagccaatgagtggaatacaattgaaggcttggtggacttgctccagccgttcaagcag
gttgccgaaatgatgtctgcttccaaatacccaacaataagtatggtgaaacctctcctt
cacatgctcctgaacacaacactaaacatcaaagaaaatgacttgaaagaaatcagtatg
gcaaaggaagtgatagccaaagaattgtccacaacataccagcatgcgcccgatatagac
atgtttctcaacgttgcaactttcctggaccccaggtacaagaaacttccatttctttca
gcatttgagagacagcaggttgaaaacagagtagtagaggacgcaaaaagtctcctagag
gaagaaaaggagaacacattgaggcctgaagaaaagttttttgcattgtctgaagagcca
ccagtgaaaaaaatggcaatttcctctatccctcctcctactagtgccatcaataacatg
cttgcagagatattttgccagacagggggtgctgaagaccaagaggagtggcatgctcag
attattgaggagctgagtaatttcaaatcccagaaagttcttggactaaatgaagatcct
ctcaagtggtggtctgacaggctagctttatttcctgttttgccaaaggtacttcagaaa
tactggtgtattgtggccacaagggttttccctgaacgtctctttggttcctctgcaaac
attgttagtgctaagagaaatcggttagccccggctcatgtagatgaacaaatctttttg
tatgagaactctcgcaatgggtcagaagctgagccagaggaagaagatgaaggtgaatgg
ggcttggatcaggagcacatcactagtctaagtgacaccacaaatgtaaacagcagtttc
tttaatatgcgagacagtggcttcatgtag
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