Podarcis raffonei (Aeolian wall lizard): 128413529
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Entry
128413529 CDS
T09310
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04110
Cell cycle
praf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128413529 (SMC1B)
04114 Oocyte meiosis
128413529 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128413529 (SMC1B)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128413529 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
128413529 (SMC1B)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Phage_coat
Motif
Other DBs
NCBI-GeneID:
128413529
NCBI-ProteinID:
XP_053243547
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All DBs
Position
5:3202226..3243772
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AA seq
1243 aa
AA seq
DB search
MGYLQLLMVENFKSWQGKQCIGPFKKFTCVIGPNGSGKSNVMDALSFVMGEKTSNLRVRH
IQELIHGAHIGKPVSSTGSVKMVYMEENGEEKTFSRIIRGSGSEFLVNDKIVSRSVYTKE
LEEIGIIARARNCLVFQGEVETIAMKKPKERTLLFEQISHSGELAAEYAEKKKNMQQSEE
EAQFSYNKKKNVAAERKRAKLEKEEAEHYQMMFDKLRECREKLQMFKLYHNEQKINFLNS
KLAAKNKDIDSNKTAVSHAEDAVGTKKKALGALNRKQQQIEKEIKSLEILLNQKRPQYIK
AKERTSYQIKKVDTAKKDLRDHMKEQAKMEENKKELETELMDIDKAWKAYEKKVEEEALH
QGREVLLEESQIRKYKELKELVRKKVAVLTQQLKKLHLEQKADEDKMAFEQRKQREVEAS
MKQVMEQIEDHEKRIEKLTEYSSTCVESLAEKKQEEVTLTNEIERSKIRMTELNEELNKI
VSDLHNAKIDVHEGKRQKTRAENLESLKRLYPGHVFGRLLDLCHPIHKKYQLAVTKVFGM
YMVAIVVASEKVARECIRFLKEQRAEAETFLPLDYLKVEPINEQLREIKGTKMMIDVIQT
SFPALKKVIQFVCGNGLVCETVQEARQIAFEGPYRLKTVALDGTLFLKSGVISGGSSDLK
KKARYWDEKEVNELKEQREKLMNELKDLMKIKRKEADLKQLQAQCQGIQTRHKYSQNELE
VLKKKHIANFYKEKSMLESVLLNSQSEHVMLNEGVLQRAVKMDELQKKINEVEDNVFGDF
CAEIGVDNIRVYEKEHLQEQEEIDKKRFQFENQKTRLSAQLEYICSLVDKAVKKNNMLKE
NICKDEAYIISLKKDEENFLQMVEEVTVELQQLKERWNVNKADVAEAQNQVEESRKALLT
LIRELAKLQKEGIAIETSLEQKKLERHNTFLDCKLQDLKIGLLLGSLDDISEIELGSDTE
TTEMTADIYEREEAIHVDYSNLAKELMDLRSDKDIETHLTKLQQEIASRENVLSKTAAPN
MRALERLHVVTGRFQESVDVFETCRTEARLCRQEFEKVKKKRYELFSQCFEHVSVAIDQI
YKKLCRNSSAQAFLSPENPEEPYLEGIGYNCVAPGKRFMPMDNLSGGEKSVAALALVFAI
HSFRPAPFFVLDEVDAALDNTNIGKISSFIKEQAQEKFQIIVISLKEEFYSEADALVGVW
PEQEDTIYSQVLSLDLTLYRESDDENERQPKGRKSSALKYDIK
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggatacttgcagcttttgatggtggaaaatttcaaatcatggcaagggaaacaatgc
ataggaccgttcaagaaattcacatgtgtcattggtcccaatggttcagggaaatcaaat
gtaatggatgcacttagttttgtaatgggtgagaagacatctaatttgagagtgaggcac
atccaagaactgatacatggagcacatatcgggaagccggtttcatctactggaagtgtt
aaaatggtgtatatggaggaaaatggagaagagaaaacattttcaagaattattcgaggc
agtggatctgaattccttgttaatgacaagattgtcagcagatctgtttatacaaaggaa
cttgaagaaattggtataattgctagagcaaggaattgcttggtttttcagggtgaagtt
gaaacaattgctatgaagaaacccaaggaaagaactctactttttgaacaaattagtcat
tcaggagaacttgctgctgaatacgcagaaaagaagaagaatatgcagcagtcagaggaa
gaggcacagtttagttataacaagaagaaaaatgttgcagctgagcgcaaacgtgccaag
ttggagaaggaggaggcagagcattaccagatgatgtttgacaagttaagggaatgcaga
gagaagctgcaaatgttcaagctgtatcacaatgaacaaaaaattaactttctgaacagc
aaattggctgcaaaaaacaaggatattgattctaacaaaactgctgtttcccatgctgaa
gatgcagtgggaaccaagaaaaaagcgctaggagcattaaatagaaaacagcagcagatc
gaaaaagaaataaagtctctggaaattttgctgaatcaaaaaagacctcagtatattaaa
gcaaaagaaagaacctcttaccaaataaaaaaagtagatacagctaagaaagatttaaga
gatcatatgaaagaacaggctaagatggaggaaaacaaaaaagaactagagacagaactg
atggatattgataaagcttggaaagcatatgaaaaaaaggttgaagaggaagcactgcac
caagggagagaggttttgctagaagaaagtcagatacgtaaatataaggagctgaaagaa
ctagttaggaaaaaagtagctgtattgactcagcaactgaaaaaactgcacttggagcaa
aaggcagatgaggacaagatggcatttgagcagcggaaacagagagaagttgaggcaagt
atgaagcaagttatggaacagatagaagatcatgaaaagcggatagagaagttgacagag
tatagcagcacatgtgttgaatctttagcagagaaaaaacaggaagaagtaacactcaca
aatgaaattgaaaggtcaaagatacgaatgactgagttaaatgaagaactgaataaaatt
gtcagtgacctgcataatgcaaaaatcgatgtccatgaggggaaacgccagaagacaagg
gctgaaaacttggagagcctcaaaagactatatcctggtcacgtgtttggaagactgctt
gacttgtgtcaccctatccataaaaaatatcagcttgctgtcaccaaagtttttggcatg
tatatggttgcgattgttgtggcttcagaaaaagtagctagagaatgtattcgtttcctc
aaggaacaaagagctgaggctgaaactttccttcctttagattaccttaaggtagaacca
atcaatgaacagttgagagagataaaaggaactaaaatgatgattgatgttatacagaca
tcgtttcctgctctgaagaaagtaattcagtttgtttgtgggaacggtttagtatgtgaa
acagtacaggaagcaagacaaatagcatttgaaggaccataccgacttaaaacagtggct
ctggatggaactttatttttgaaatctggtgtaatctctggcggctcaagtgatttgaaa
aagaaagctagatactgggatgaaaaagaggtgaatgaacttaaagagcagagagagaag
ctgatgaatgaactaaaggacttgatgaaaatcaagcgcaaagaggctgatttaaagcag
ttgcaagctcaatgccaaggaattcaaacacgacataaatattcgcaaaatgaactagaa
gttcttaaaaaaaaacatattgctaatttctataaggaaaaatctatgctggaaagtgta
ctattaaatagccagtcagaacatgtgatgttgaatgaaggagttttacaaagagctgtt
aaaatggatgaactccaaaagaaaattaatgaggtggaagacaatgttttcggtgacttc
tgtgcagagattggagtagacaatattcgtgtatatgaaaaggaacatttgcaagagcag
gaagaaattgacaagaagaggttccagtttgaaaaccagaagacacgactgagtgctcag
cttgagtatatttgcagcctggtagacaaggcggtgaagaagaataacatgttaaaggag
aatatttgcaaagatgaagcttatattattagcctgaaaaaggatgaggaaaacttttta
caaatggtcgaggaagttacggtggaactgcaacagcttaaggaaaggtggaatgttaat
aaggctgatgttgcagaagcacagaatcaagttgaggaatcaaggaaggcattgctaact
ctaataagagagttggcaaagttgcaaaaggaaggtattgcaatcgagacctctctggag
cagaaaaagttagaaaggcataatacctttcttgattgcaaactccaggacttaaagata
ggacttctgttgggatctttggatgacattagtgaaatagagctgggatctgatactgaa
actacagaaatgacggctgatatctatgaaagagaagaggcaattcatgtagactatagc
aatcttgcaaaagagctaatggacttgcgctccgacaaagatattgaaactcacctaaca
aaacttcagcaggaaatagcatctagagaaaatgttctatcaaaaacagcagccccgaat
atgagagctcttgagagattacatgttgttacaggcagatttcaagaatcagttgatgtg
tttgagacttgtaggacagaagccagattatgtaggcaagaatttgagaaggtgaagaaa
aagagatacgagctgttcagtcagtgttttgaacatgtgtcagtagctatagatcagatc
tacaagaaactctgcagaaacagtagcgctcaggcgtttcttagtcccgaaaatcccgag
gagccttacttggaaggtattggctataactgtgtagctcctggaaaaagatttatgcca
atggacaacctgtcaggtggtgaaaaatctgttgcagctttggctcttgtgtttgcaata
cacagctttaggcctgcccccttttttgttttggatgaagtagatgcagcgctagataac
acaaacattggcaagatatcaagcttcattaaagagcaggcccaagaaaagtttcagatt
atcgttatttctctaaaggaagagttttattctgaagcagatgctttagttggagtctgg
cctgagcaagaagatactatctacagtcaagtactgagcctggatcttactctgtatcga
gagtctgatgatgaaaatgaaaggcaaccaaaaggcagaaagagctctgcattgaaatat
gatataaagtga
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