Podarcis raffonei (Aeolian wall lizard): 128413577
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Entry
128413577 CDS
T09310
Symbol
ARHGEF5
Name
(RefSeq) rho guanine nucleotide exchange factor 5 isoform X1
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128413577 (ARHGEF5)
Membrane trafficking [BR:
praf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128413577 (ARHGEF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_1
SH3_9
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
128413577
NCBI-ProteinID:
XP_053243676
LinkDB
All DBs
Position
5:7245743..7312126
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AA seq
1830 aa
AA seq
DB search
MGYKGTKNRMHRYRRRPKKDVPLMESEKIKGEGPFPSATHKFNESPNPTPARRHHDVTEF
FTRSNVSEERVAVTAEGKKNSFSQALPLLFVMEEQIWGRFPNPVERETSMGLERGPRDPE
DWGGFSQQENLLNIQEVTLEDSKEAPLDPHQRELETARSLSDHESSLLSTATLEQISSIP
SEVTVGEIKGETVVLGFPQALNPRDAFSQTLCEETHLTGTFSASEESAYDYPPVSHDVSE
HHQNAEASKGRSDENHSSELESQYELDKSHRPNMEVTSEIDEKMSPKTEGAGQMHPDTSI
VNEEGKVRELKGQREGVKSSALFQPSFEFPKGGEIHFDVQQPKPNEILSLPDSNREDNNS
DIGEEVEESGQNSFICTVLHLEEEDGIGGSKAPSLKETVKTKHATDCDEAESSQVSKSLE
SGPAKLDPPELVDTELNEECLEWKGMEKKVETEQNNLELRYKGQEQQDCCVQIRQASKQR
VERDITAPLGLNALQMNVDLPDLNKNCSLVEAEASNFTFKELSSPNHSPKSVWTQDSGNP
QITKARAMSISEGIPVFESPGTQAPTCHDSRPLESSGVFDQVGHNSQGSEQPPEEDGRAI
EREDSKYGGEETSVVSLDGEGRPPSCRDLIVTPDSQIYLYDSQPVDHPVDGEIHITASSL
GTSTETDSLEEGAGKRARDGTVVPCKESTQEPENQNLPKPCQLNRMDCGEVLSSDVDVWT
SSKNDVSGKDLYEVAQGTASEILQSIPSGEGLSNADRQSVEFSPESFQAQDTTISYLETP
MSSLEIPEKEAGADALRMEQQTLISESPCSLVLEEDGTACGNTETPDVAQPTKPLTPTPA
SDQAIPPEPASSHLNQFMPTESAQFLSPAPNADTLAQPLTPALAPSQPSQLLERLPSPSQ
ACQFLAPKSTAIKVPQSSVPTPDNELFNQPPATECNSNQHMPHPLLSDSVFPADHPIQLA
NSSQTRESVAPEFNSNPTAFALNRDLQLPHPASSSNMPPTPDGDQFAQQPVEAPESTLPV
NYIDGGGCVFVADCISQTISYAAEAEKLAQAPNIDSRVEELPVVQLANSEGAGTSQGQKG
RNIHEASSLLEIHPDVGISGNSEPVEVSSCSIPDTMDICDGKSSNKYSLHPSVRSQKMSE
AAEARSPTQPSLIAFTNPIHFFQRGPPSPPTIRHPCREQPACQGPQWWQQSQRGDAKRDA
EDTVPPVLPRMEGGARHLPLEKCTSCPNKSVGTKEPTSSSKKQEVLSKHRAKSKDWHRQG
LRKISIPTDNELEFIASLISSKEEAPAHKEKSDHFDRVKFGEKKLLETAETIKRRRSKLI
NSSKLLYQEYSDVALNKAIQSQKRADSLTEDLEYKSTDSPRLRRKNISPQDSYLQRLSVS
SSTSLWQDIPMVRESTVLLSMTREEQKLQEAKFELIVSEASYLRSLNVAVDHFQHCHELQ
AVLTNQDKQWLFSRLQDVRDVSANFLFDLEEKLEENMFTFNVCDVALRHAPEFRRVYLPY
VTNQTYQEQTFRRLLNDVPAFQQVLERLESDPVCQRLSLKSFLILPFQRITRLKLLLQNI
LKRTRPGADEEVQATQAYDALEKLIKDCNENVQRMRSTEELIYLSKNMEFECKIFPLISQ
SRRLVKRGELTALEYNLSLKWKLTTRPIYLHLFNDYLLLSRPRENGRFIVFDFAASSNVR
GEKCEMKLHGSSKNLFRLFLLQNNQGKKVEFLFRTETQSEKLRWISALMPQQAEPDLLDD
PALLDKLQVQCVRSYKARENDELALEKADIIMVLQQSSDGWFEGVKLSDGERGWFPSDHV
EIISSKQARQMNLKEEQRVKYAKQQVFHKR
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgggatacaaaggaacaaagaacaggatgcatcgctatcggaggcggccaaagaaggat
gtgccattgatggagtctgaaaaaatcaaaggggaaggtcctttcccctcagcaacccac
aaattcaatgaatctcctaatcctacaccagccagaaggcaccatgatgtcacagaattt
ttcaccaggagcaatgtttctgaagagagggtggcagtgacagcagagggtaaaaagaac
tctttttctcaagccctgcctcttctctttgtcatggaagaacagatatggggcagattc
cctaaccctgtggaaagagagacatccatgggactggaaagaggcccgagagatccagag
gactggggaggattttcccagcaagaaaatcttctcaatatacaagaagtcactttggag
gatagcaaggaggctcctttggatccccatcagagagaacttgaaactgctcgttcctta
agtgatcatgaatcttcccttctcagtacagcaactcttgaacagatctcaagtattccc
agtgaggtcacggtgggagagataaaaggtgaaaccgttgttcttggatttccccaagct
ctgaaccctcgtgatgcattttctcagacactgtgtgaggaaacacatttaacaggcact
ttttcagctagtgaggaatcagcctatgactatcccccagtgagtcatgatgtttcagag
catcaccagaatgctgaggcttccaaaggcagatcagatgaaaatcactcatcggaacta
gagtctcaatatgaactagacaagagccataggccaaatatggaagtcacatcggagatt
gatgagaagatgtcccctaagaccgaaggagctggtcagatgcacccagatacctccata
gtgaatgaagaggggaaagtaagagagttaaagggacaaagagagggtgtgaaatcttct
gcacttttccagccaagttttgaatttcctaagggtggggaaatacatttcgatgtgcaa
caaccaaagcctaatgaaattttgtctctgccagactccaatagagaagacaataattca
gatataggagaggaagtggaagaatcgggacaaaattcatttatttgcactgtcctccat
cttgaggaggaggatggcataggaggaagcaaggctccttcactaaaggagacggttaaa
acaaagcatgctactgattgtgatgaagcagaatcatctcaggtatcaaaatcattggag
tcagggcctgcaaaattggacccaccagagttggtagacactgaactaaacgaggaatgc
ttagaatggaagggaatggagaaaaaggtggaaacagagcagaataatctagaattgaga
tacaaaggtcaggaacaacaagactgttgtgtgcagataaggcaagcatcaaagcaaagg
gtagagagagatataactgccccactaggtttaaacgcactgcaaatgaacgtggatctt
cctgatttaaacaagaactgttctttggttgaggccgaagcatctaatttcactttcaag
gagctttcatctccaaatcacagtccaaagtcagtctggacacaggactctggtaatcca
caaataacaaaggcaagagctatgtcgatatctgaaggtatcccagtgtttgagagccca
gggacacaggctccaacatgccatgattctagaccactggaatcctctggcgtctttgac
caagttggccataatagccaaggcagtgagcaaccccctgaggaagatggaagagctatt
gaaagagaggacagcaaatatggtggtgaagagacaagtgttgtgagtcttgatggcgaa
ggaagaccaccatcctgtagagatttaatagtaactcctgattcacagatttatctgtat
gattctcagcctgtggatcaccctgttgatggtgaaatccatatcactgcctcatcactg
gggacctcaacagagacagattctctggaggaaggtgctggcaagagagccagagatggt
actgttgtgccatgtaaagaatctacacaagagccagaaaaccagaatctgcctaagcca
tgccagctgaacagaatggattgtggagaagtactgagcagtgatgtagacgtctggact
tccagcaaaaatgacgtatctggtaaagacttatatgaagttgctcaaggtactgcttct
gagatccttcaaagtataccatcaggggagggtctgtccaacgcagacagacagagtgta
gaattcagcccagaatcattccaggcacaagacactaccataagttatctggaaacccca
atgagcagccttgagattccagaaaaggaagcaggagcagatgcacttcgcatggaacaa
caaactttaatcagtgagtcaccatgttcattagttcttgaagaggatggaacagcatgt
ggcaacacggagacccctgatgtggctcagccaacaaagcctttgaccccaacacctgcc
tcggatcaggccattcctccagagcctgcttccagccacttaaatcagttcatgccaact
gagtctgcccagtttttaagccctgcacctaatgcagacacccttgctcagcccctcact
cctgctcttgcacctagtcagcccagtcagctcctagaacgactgccctctcccagtcaa
gcttgccagtttttagccccaaagtccactgccattaaggtgccacagtcttctgtcccg
acacctgacaatgaactatttaatcagcccccagcgacggaatgcaattccaaccaacat
atgccacatccactcctttctgattcggtgtttcctgccgatcaccccattcaactagca
aactctagccaaaccagggaatctgtagctcctgagtttaactccaaccccacagccttt
gctcttaacagggaccttcagcttccacatccagcttccagctccaacatgcctccaact
cctgatggtgatcagtttgcccaacaaccagttgaagcaccagagtctactctacctgtt
aactatatagatgggggtggttgtgtgtttgttgccgactgcatctctcagaccatatcc
tatgctgctgaagccgaaaagcttgcccaggctccaaacatagacagcagagttgaagaa
ctccctgttgtacagttggccaattcagaaggggcaggtacttcacaaggccagaaaggc
aggaatatacacgaagcatccagtctattggagatacacccagatgtcggcatttcggga
aacagtgagccagtggaagtctcctcctgcagcattcctgatactatggatatatgcgat
gggaagtcatcaaataaatacagcctccatccctcagtaaggagtcagaaaatgtctgaa
gctgcagaggccagaagtccaacgcagccttcacttatagctttcaccaacccaatacac
tttttccagcgaggtcctccatctccaccaactatcagacacccatgcagagaacagcct
gcctgtcaagggccgcagtggtggcagcagtcccagagaggagatgctaagagagatgca
gaggacacagtcccacctgtgcttcccagaatggaaggcggagccaggcacctaccctta
gagaaatgtactagttgtccaaataaaagtgtaggcacaaaagaaccaacatccagttca
aagaaacaggaagtgctaagcaaacaccgggctaaaagcaaagactggcatcggcagggt
ttgagaaagatctcaataccaacggacaatgaattagagtttatagcatctcttatctcg
tcaaaggaggaagcccctgcacacaaagaaaaatcagaccatttcgacagagtgaaattt
ggagagaagaaactactagagacagcagaaaccatcaaacggcggcgctccaaattaatc
aactcgtcgaagttgctctaccaggaatacagcgatgttgcgctgaacaaagcgattcaa
agtcaaaagagagcagattcgttgaccgaagatttggagtataaatccacagactcccca
aggttacgaagaaaaaacatctcccctcaggactcctacctgcaacgcctgtccgtctca
tcctcgacgtccctgtggcaggacatccccatggtccgagagagcactgtgctgctgagc
atgacccgcgaggagcagaagttgcaggaggccaagtttgaactgattgtatcagaagcc
tcatacctgcggagcttaaacgtggccgtggaccacttccagcactgccacgaactccaa
gctgtcttaacaaatcaagataaacagtggcttttctcccgccttcaggatgtacgtgac
gttagtgccaatttcctatttgacctggaggagaagcttgaggagaacatgttcaccttc
aatgtgtgcgacgtggctctgaggcatgcgccagaattccggagggtttacctgccgtat
gtgacaaaccagacataccaggagcagacctttcggcgactactgaatgatgtccctgcc
ttccaacaggttttggagagactagaaagtgatcctgtttgccagcgcctgtctctcaaa
tccttcctcatcctcccgttccagcgcatcacaagacttaaactccttctccagaacata
ctgaagagaactcggcccggtgccgatgaagaggtacaggccactcaagcatatgatgca
cttgagaagctcatcaaagattgcaatgaaaatgtccagcgtatgaggagcaccgaggag
ctaatctacttgagtaaaaatatggagtttgaatgcaagattttcccactcatctcacag
tcacggcggctggtaaaacgtggggaactcacagcgctggagtacaacttgagcttgaag
tggaaactgaccacccggccaatctacctgcacctctttaatgactacctgctcctatct
cggcccagagagaatgggcgctttatcgtatttgattttgctgcttcctcgaatgtgcgt
ggagagaagtgtgaaatgaaactgcacggctcaagcaaaaatctcttccgcctcttcctg
ctgcagaacaatcaagggaaaaaagtggagttcctcttccgtacagaaacacagagtgag
aagctgaggtggatttctgctcttatgccacagcaagctgaacctgaccttttggatgac
cctgctctcttagacaaacttcaagttcagtgtgtgaggtcatacaaagcccgagagaat
gatgagctggccctggagaaagcagatataattatggtcctgcagcaaagtagcgatggg
tggtttgaaggagtgaaactctccgatggggaaagaggctggttcccttccgatcacgtg
gaaataatctccagcaagcaagcgcgccagatgaatctgaaggaggaacagcgtgtcaag
tatgcaaaacaacaagtctttcataagagatag
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integrated database retrieval system
