Podarcis raffonei (Aeolian wall lizard): 128413601
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Entry
128413601 CDS
T09310
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128413601 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128413601 (RAG1)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128413601 (RAG1)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128413601 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
128413601
NCBI-ProteinID:
XP_053243725
LinkDB
All DBs
Position
1:complement(55984630..55988002)
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AA seq
1047 aa
AA seq
DB search
MEMLPPPSMNLCFVSEQLQPPSKKFSEWKFKLFKVRSLSKPLPEDGHLAHSDKGKEAASL
DNVTEEQADVITSVSQEPSETVTEVNSTVQPRDKNAFPVNQREIETHQTKLQHLCRICGG
SFKTDPYKRSHPVHGPVDDEMQALLRKKEKRATSWPDLLAKVFKIDVRGDIDTIHPTNFC
HNCWNVVQRKFSNSPCEEYFPRNGTMEWHPHSPSCEVCGTAFRGVKRKKQALNPQMSKKL
RIAAGRARKIRCVRNTKRVNHKALMKKIANCNKIHLSTKILAVDYPVDFVKSISCQICEH
ILADPVETTCRHLFCRVCILKCLKVMGSYCPACRYPCFPTDLVNPVKSFLSILNSLAVRC
PVKGCHEEVLLGKYCHHLSIHKEVEDKEGYVYVNKGGRPRQHLLSLTRRAQKHRLRELKL
QVKAFAEKEEGGDVKSVCLTLFLLALRARNEHRQADELEAMMQGKGSGLHPAVCLAIRVN
TFLSCSQYHKMYRTVKAITGRQIFQPLHALRTAEKSLLPGYHPFEWKPPLKNVSSNTEVG
IIDGLSGIQRLVDDYPVDTIAKRFRYDAALVSALMDMEEDIMEGLKTKDLDDYLKGPFTV
VIKESCDGMGDVSEKHGCGPPVPEKAVRFSFTLMSITVAHDKGSSNIFEESKPNSELCCK
PLCLMLADESDHETLTAILSPLVAEREAMKNSVLILDMAGIPRMFKFVFRGTGYDEKLVR
EVEGLEASGSTYICTLCDTTRQEASQNLILHSITRSHTENLERYEVWRSNPFHETVEELR
DRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQFEIGEVYKNPDASKEERKRWQSTL
DKLLRKKMNLKPMTRMNGNFARKLMTKETVEAVCELIKCDERQEALRELMDLYLKMKPVW
RSSCPTKECPELVCQYSFHSQRFAELLSTKFSYRYEGRITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKHLQKFMNAHNMLKSQG
FTLNPEQSMGDFMTLEDSLEITDSMEF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctgccaccaccaagcatgaacttgtgctttgtgtcagagcagctccagccg
ccctccaagaagttttctgaatggaaattcaagctgttcaaagtgagatcacttagcaaa
ccgcttccggaagacggtcacctggctcacagtgataaaggaaaagaggcagcctctctg
gacaatgtcaccgaggagcaggctgatgtgattacttcagtgtcacaagaaccttctgaa
acagtcacggaagtcaacagcactgtgcagccaagagataaaaatgcctttcctgtgaac
caaagggagattgaaactcaccaaaccaaactgcagcacctctgtcgcatctgtggaggc
tcatttaagactgacccttacaagcgaagccacccagttcatgggccagtggatgatgag
atgcaagcccttctaagaaagaaggagaaaagggccacatcctggccagatctccttgct
aaggttttcaagatagacgtgagaggtgacattgacacaatccatcctactaatttttgc
cacaactgctggaatgttgttcaaaggaaattcagcaattctccatgtgaagagtatttc
ccaaggaatggcaccatggaatggcatccccattccccaagctgcgaggtgtgtggcact
gccttccgtggggtcaaaagaaagaagcaagccctgaatccacagatgagcaaaaagctc
aggatcgcagctgggcgtgctagaaaaataaggtgcgtaaggaatacgaaacgagtgaac
cacaaggctttaatgaaaaagattgccaactgcaacaagatacacctcagtaccaagatc
cttgccgtagattatcctgtggactttgtaaaatcgatctcttgccagatctgtgagcat
atcttggctgatccagtagaaacgacatgtcggcacttattctgcagagtctgcatcctt
aaatgcctcaaagtgatgggaagttattgcccagcctgtcgctatccttgctttccgaca
gatctggtgaatcctgttaaatccttcttgagtatcctcaacagtttggctgtgagatgt
ccagtgaaagggtgtcatgaggaggtcctcctgggaaaatactgccatcatctttccatc
cacaaagaggtagaagacaaagagggctatgtgtatgtaaacaaaggtggccggccaaga
caacacttactttcattgacccggagggcacaaaagcaccgcctaagagaactcaagctt
caagtgaaagcttttgctgagaaagaagaagggggcgatgtaaagtctgtgtgtctaact
ttgttcctactggctctgagagcgagaaatgaacatagacaagctgatgagttggaagct
atgatgcaaggaaagggatcaggccttcacccagctgtttgcttggcaattcgggtcaac
acttttctcagctgtagccaataccataaaatgtacagaactgtaaaagcaataacagga
aggcagatatttcagccattgcatgccctccgaactgctgaaaagtctcttctcccaggt
taccatccatttgagtggaagccacccttgaaaaatgtctccagtaacacagaagtaggc
attattgatgggctgtcaggcatacagcgtttggttgatgactacccagtggacacaatt
gccaagagatttcgatatgatgcagctttggtttctgccctgatggatatggaagaagac
atcatggaagggctgaaaactaaggacttggatgactatttgaaaggccctttcaccgtg
gtgattaaagagtcctgtgatggaatgggagatgtcagtgaaaagcatggctgtggccca
ccggtccccgagaaagcagttcggttctctttcacactcatgagcatcacggtagctcat
gacaagggaagctccaatatctttgaagaaagcaagcccaattcagaactgtgttgcaaa
cctttgtgcctcatgctggctgatgaatcagatcatgagacactcacagccatactgagc
cctcttgtggcagaaagagaggccatgaaaaatagtgtattgatacttgatatggctggg
atccccagaatgttcaaatttgtctttcggggcactgggtatgatgaaaagcttgtccgt
gaagtagagggccttgaagcctctggctcgacttacatttgcacactttgtgatacaaca
cgccaggaagcatctcagaacttgatcctccattccataactagaagtcatactgaaaac
ctagagcgctatgaggtgtggaggtcaaaccctttccacgagactgttgaagaactacgt
gacagagtgaagggtgtttctgccaagccttttattgagactgttccttcgatagatgca
ttgcactgtgacattggcaacgcagccgagttttacaaaatattccagtttgagattggc
gaagtatacaaaaaccctgacgcatccaaagaagagagaaagaggtggcaatcaactctt
gataagctccttagaaagaaaatgaacttaaagcccatgacaaggatgaatggaaatttt
gcaagaaagctcatgaccaaagagactgtggaagcagtttgtgaattaataaagtgtgac
gagagacaggaagcccttagagaactcatggacctttaccttaagatgaagccagtatgg
cggtcctcatgtcccaccaaggaatgcccagaacttgtttgccagtacagcttccattct
caacgttttgcagagttgctgtccacaaaattcagttacagatatgagggaaggatcaca
aattactttcataaaacgcttgctcatgttcctgaaattatcgaaagagatggctccatt
ggtgcttgggcaagcgagggcaatgaatctgggaacaagctattcaggcgctttcgaaaa
atgaacgccaggcaatcaaaatgctatgaaatggaggatgtcttgaagcaccattggctg
tacacctcaaaacatttgcagaagttcatgaatgctcataatatgttgaaaagccagggg
ttcacattaaatccagagcagagtatgggagatttcatgacactggaagactcattagaa
attactgattccatggaattctaa
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