Podarcis raffonei (Aeolian wall lizard): 128413698
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Entry
128413698 CDS
T09310
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128413698 (ZSWIM8)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
128413698 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
128413698
NCBI-ProteinID:
XP_053243992
LinkDB
All DBs
Position
5:16483344..16542032
Genome browser
AA seq
1865 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPHRRRDLCTQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSNADKKNSFCWVKAIQQRNCRPQCGETICEAGKAHGLDVSGTCLQLGDRSRPA
SQEPAVRPKELIGKRKVVSEGPQRVLRRLSAEGDKAAYKTAVNKGGKLPVGKTLASKHSG
KRRMSSEDSSLEPDLAELALDDSSLALGAEASNTFSFTDSPLSRSYRDTFEDDGGVYFSE
ATEPTLRSSPSSKKTPKDPVGEVGSGDDDIPCPDESTGGVSLKPKEVGENGAAGGGGEEE
EDDYQVYYLNPQEVAKEEDDKAEGGVEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELAKDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERQEYHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGSNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHATQSAAPIQHLPGTPVTQQAGVTTAVQSNTSEPFLE
KSSQDNPQRSPCDPPMEPSVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTAKDSK
HNASINMWHGYIQNTVYSSGHPIKTKIGMASIDSSAPETTSDSSPTLSRRPLRGGWAATS
WGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARAKTVEVGRYKGRRPESHAPHVPNQPS
EAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNF
VSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDSNM
VRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACLAVEEAAKGGGVYPEVLF
EVAHQWYWLYEQTVGGTLAQREGATGCSASGARASCEAVRGLADTRVTSEPTTVTVAAAV
TAAATVVPVISVGSTIYQQHTMAGPAMAHAHTQGLHPYTTLQTHIPCNPQYIGHPIQHMP
RPAVFPVPGSAYPQAGLPCPLPLQGVHPAFIGAQYPYSVTTPSLAATAVSFPGVPVPSMT
QIAVHPYHAETGLSLSSNVAIGSVHAGSTFPAIQGTSLTSLSSQPSSLVTGGFPSEDEQH
SQPAGNQGVHHLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAAKLGV
NYVHQFCLGAAKGVLSPFVLQEIIMESLQRLNPAHVHNHLRTPAFHQLVQRCQQAYIQYI
HHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKDLWQRVSLEM
TTFSP
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcagagtgggaggacggggaaaggttttcatttgaagattctgac
cgctttgaagaagactccctttgttccttcatctctgaggcggagagcttatgccagaat
tggagaggatggcggaagcaatctgccggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccgctggtggagttgtcagcaaaacaggtggcatttcacattccattt
gaagtggttgagaaagtctacccacctgtgcccgaacaactgcagcttcgtattgccttt
tggagcttcccagaaaatgaagaggacatcaggctgtactcctgcttggcaaatggcagt
gcagatgagttccagagaggcgagcaactcttccgaatgagggctgttaaagatccactg
cagataggtttccatctgagtgccacagtggtacctccccagatggtaccaccaaaagga
gcatacaatgtggcagtgatgtttgacagatgcaggatcacctcatgcagctgcacttgt
ggagctggggccaaatggtgtgcccatgttgtagccctctgccttttccggatacacaat
gcatctgcagtgtgcttgcgagcacctgtttcagaatccctgtctcgactgcagagagat
cagctgcagaaatttgcacagtacctcatcagtgaacttccccagcagatccttcccact
gctcagcgcttgctggatgagttgctctcttctcagtccactgctatcaatactgtatgt
ggagccccagatcccactgccggtccctctgcctcagatcaaagcacctggtacttggac
gaatctacattaagtgacaacataaagaaaacccttcacaaattttgtggtccatctcct
gttgtcttcagtgatgtgaactctatgtacctttcgtccacggagcccccagctgccgcc
gaatgggcctgtctcttgcgtcctctgaggggaagggagccggagggcatctggaactta
ctttctattgttcgggagatgttcaagagacgggacaccaatgcagcccctctgctagaa
attctaacagaccagtgcctgacctacgaacagataaccggctggtggtacagtgtaagg
acatctgcatcccatagcagtgcaagtgggcacactggccgtagcaacggccagtcagaa
gtggctgctcatgcttgtgcgagcatgtgcgatgagatggtggttctctggaggcttgct
gttttggatccgaccatcagccctcatcggcggagagatttgtgcacacagctgaggcag
tggcaattgaaggtaatagacaacgtcaaaaggggacagcacaaaaaatccctcgagaaa
ctgttccaggggttcaagccagctgtggaagcttgctacttcaactgggaggaggcttat
ccaattccaggcatcacgtacagcaatgctgacaagaagaactccttttgttgggtaaag
gccatccagcagcgaaactgccgaccgcagtgtggagaaaccatctgtgaggcggggaaa
gctcatggtctggatgtttcggggacgtgcttgcaactaggggatcggtcacgccctgca
tctcaggagcctgctgtgcgccccaaagaactcattgggaagcggaaagttgtgtctgaa
ggtccccagcgggttctgagaagactttcagccgaaggcgataaagctgcatacaagacg
gctgtgaacaagggcggcaagcttccagtgggaaagacattggccagcaaacatagtggg
aagcgtcgtatgagcagcgaggacagctctctggaaccggacttggccgagttggcttta
gatgacagcagtttggcccttggtgccgaggctagcaacacgttcagcttcacagacagc
ccattgagcagaagttacagggatacctttgaggatgatggtggggtgtatttctcagag
gcaactgagcccaccctcaggagtagtccatccagcaagaagaccccaaaggacccagtg
ggggaagtgggtagtggagacgatgacattccttgccctgatgaaagtactggtggggtg
agtttgaagcccaaggaagtgggggagaatggtgctgctggaggaggaggagaagaggag
gaagacgactaccaggtgtactacctgaatccccaggaggttgctaaggaagaggatgac
aaggctgagggaggggtagaagaagaacaagacatatttgctgggataaagcccttggag
caggaaaaccgcatggagatcctgtttgcttgtgcggaggctctctatgcacatggttac
agcaatgaagcctgtcgcctcacagttgagcttgccaaggacttgttggccaaccctcct
gatctcaaagtggaacagcccccaaccaagggaaagaaaaacaaggtatccaccagcaaa
cagacatggatggcaacaaacaccttatccaaagctgctttcctgctgactgtgctgagt
gaacggcaggaataccacaatctagccttccagattggcatgtttgctctggagctgcag
aggccaccagcctctaccaaggctttggaggtaaagctggcatatcaggagtctgaaatt
gtggccttgttgaagaaaattccacttggctctaatgagatgaacactattcggggaaga
gctgaagagctgagggaaggaaccctgtgtgattaccgccctgtcttgcctcttatgctg
gccagcttcatatttgatgtcttatgcacgccagtggtttctcctacaggatccagacct
ccaagccgtaattggaataatgaaatgcctggagatgaggagctaggttttgaggcagct
gtcgctgctcttggcatgaagacgacagtgagtgaagcagagcaccctctgttgtgtgaa
ggcacccgaagggagaagggagatctcgctctagccctgatgatcacttacaaggatgac
caatctaagctaaaaaaaatcttggataagctgttggacagggagagccaaacacacaag
cctcagactctaagttcattctactcgtccagcaagcccacagtagccaatcagaaatct
ccttccaaacatgctacccaatcagctgcgcccattcagcacctcccaggaacacccgtt
acgcaacaagcaggggtaaccactgctgtccagagcaacacttcggaaccctttttggaa
aagagctcccaagataaccctcagagatctccttgtgacccaccaatggaacccagtgtc
ttaaagcaagaagggaaagttcctagccgactagcccttggaaatagaggtggctacaat
gggaggtgctggggttccccagtcagacaaaaaaagaagcacacagcgaaggacagcaag
cataatgccagtataaatatgtggcatggctacatacagaatactgtgtacagttctggt
caccccatcaaaacaaaaataggaatggccagcattgacagcagtgctccagaaaccacc
tcggacagttctccaaccctcagcaggcggcctctgcggggaggatgggcagccacttcc
tggggcagagggcaggacagcgatagcatcagtagctcttccagcgactccctgggctca
tcatcctccagtggaagcagaagagctagtggaggagcacgtgcaaagacggtggaggtc
ggcaggtataagggcaggcgtccagagagccatgctcctcatgtcccaaatcaaccctcg
gaagcagctgcacatttctactttgagctggccaagacagttctcatcaaggcgggtgga
aacagcagtacttccattttcacccacccatcctctagtggcggccaccagggtcctcat
cgcaacctccacctctgcgccttcgagattggtctctatgcactggggttgcacaacttt
gtctctcccaactggctgtctcgaacctattcctcccacgtctcttggattacagggcaa
gccatggagattggcagtgcagccttgaacatcctggtggagtgctgggatgggcacctg
acccctccggaggtagcgtccctggctgacagggcttccagagctagggattccaacatg
gtgcgagcagccgctgagctggcattgagctgcttgccgcacgcccacgccttgaaccca
aacgagatccagagagccctggtccagtgtaaggagcaggataatctaatgctggagaag
gcatgcttggccgtagaggaggcagccaaaggaggcggtgtttaccctgaagtcctgttt
gaagttgctcaccagtggtactggttgtacgaacaaactgttggcggaactcttgctcag
agagagggagccacaggctgcagtgcaagtggagcccgggcatcctgcgaagcggtgcgt
gggctggcagataccagagtgacgtcagaacccaccacagtgactgtcgcggctgcggtg
acagcagcagcaacggtggtgcccgtaatttcggtggggtcgacaatctaccagcagcac
accatggcggggccagcaatggcacatgcgcacacccagggtctgcacccttatacaaca
ctccagacccacatcccttgcaatcctcagtatatcgggcaccctatccagcacatgcca
cgcccggcggtctttcctgttcctggctcagcttatccccaagcagggttaccctgtcct
cttcctttgcagggtgtccacccagcgttcattggagcacagtacccatactcggtcact
accccgtctttggcagctacagcagtgtccttcccgggagtgcctgtcccatccatgacg
cagatcgctgtgcatccataccatgctgagaccgggctgtctctgtcttccaatgtagca
ataggaagtgttcatgcagggtctacattcccagcgattcaagggacttccttgacgagt
ctatcttctcagcccagctcccttgtcacaggaggctttccttctgaggatgagcagcac
agccagcctgcaggcaatcaaggcgtgcatcacctccactctgcctaccgagttggaatg
ttagcgctggagatgcttggccgcagagctcacaatgaccaccccaacaacttctcacgc
agcccaccctacacagaagatgtgaaatggctcctgggattagctgccaaattaggtgtc
aactatgtgcatcaattctgtcttggtgcagccaagggggttctgagcccttttgtgttg
caagagatcatcatggaatccctgcagaggctcaatcctgcccatgtccacaatcacctg
cgcacaccagccttccaccagttggtacagaggtgccagcaggcatacatacagtacatc
caccaccggctgatccacctcactccggcagactacgatgactttgtgaatgccattcgc
agcgccagaagcgccttctgcctgacccctatgggcatgatgcaattcaatgacatcctt
cagaacctgaagcgcagcaagcagactaaggatttgtggcaaagggtctctttggaaatg
accaccttttcaccatga
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