Podarcis raffonei (Aeolian wall lizard): 128413703
Help
Entry
128413703 CDS
T09310
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04510
Focal adhesion
praf04520
Adherens junction
praf04810
Regulation of actin cytoskeleton
praf04820
Cytoskeleton in muscle cells
praf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128413703 (VCL)
04520 Adherens junction
128413703 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128413703 (VCL)
04810 Regulation of actin cytoskeleton
128413703 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128413703 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128413703 (VCL)
04147 Exosome [BR:
praf04147
]
128413703 (VCL)
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128413703 (VCL)
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128413703 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
128413703
NCBI-ProteinID:
XP_053244038
LinkDB
All DBs
Position
5:16982519..17066610
Genome browser
AA seq
1142 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQSAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSGE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKLNQAKGWLRDPNAPAGDSGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQLTDQVADLRARGQGATPLALQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQSWLADPHGGSEGEEHIRGIMAEARKIAE
LCEDPKERDDILRSLGEISALTAKLSDLRKHGKGDSPEARALAKQIATSLQNLQSKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMLGPYRQD
LLAKCDRVEQLAVQLADLAARGEGESPQAKAIAAQLQDSLKDLKSRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRDEVFDDRAANFENHAARLGATAEKAAAVGTANKSTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGMVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKKEVENSEDPKFR
EAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKNFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEAKAGEVLNQPMMM
AARQLHDEARKWSSKPDVTDEVKEAPEADVDVDQEEEEEEEEADVEFTLPSDIEDDYEPE
LLLMPTNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNK
RALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKAT
MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW
YQ
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacccgcacgatcgagagtatcctggagccggtggcgcagcagatc
tcccacctggtcatcatgcacgaagagggcgaggtggacggcaaggccatcccggatctc
accgctcccgtggccgccgtgcaatccgccgtgagcaacctggtccgggttggaaaagaa
actgtacagacaactgaagaccagattttgaagagagacatgcctcctgcattcattaag
gtggaaaatgcttgcacaaagcttgtgcaggccgcgcagatgctccaaacagacccttac
tcagtacctgctcgtgattacctcattgacggatcaagaggcatcctttctgggacatcg
gacttgcttctgacattcgatgaggccgaggtccgtaaaatcattcgtgtctgcaaagga
attctggaatacctaacagtggcagaggtggtggaaactatggaggacttggtcacctac
acaaagaacctagggccagggatgaccaagatggccaaaatgattgatgagcggcagcaa
gagctgactcaccaggaacacagagtcatgttggtgaactccatgaacaccgtgaaggag
ctactgccggttcttatttctgctatgaagatttttgtaacaacgaaaaattccaaaagc
caagggatagaggaggccttgaaaaaccgcaactttacagtggagaagatgagtggtgaa
ataaatgaaatcatccgtgttctgcaactcacgtcctgggatgaagatgcttgggctagc
aaggatacagaagctatgaagagagcattggccttaatagattccaagttgaaccaagcc
aagggctggcttagagaccccaacgctccagcaggagactctggcgagcaagccataagg
cagatcctggatgaagcagggaaagttggagagctctgtgcaggcaaagaacgcagagag
attctaggaacctgtaaaatgcttggccagttgactgaccaagtggctgatcttcgagct
agaggacaaggtgctacaccgctagccttgcagaaggctcagcaagtgtcccaaggcttg
gatttactcacagcaaaagtggaaaatgcagctcgcaagctggaggctatgaccaactct
aagcaggcaattgcaaagaaaattgatgccgctcagagctggctggcagatcctcatggg
ggaagcgaaggagaggaacacattcgaggcattatggctgaagccaggaaaattgcagag
ctctgcgaggaccccaaagagcgagacgacattttgcggtccctcggagaaatctcggcc
ctgactgctaagttgtcagacctccggaaacatggaaagggggattctcccgaagcccgt
gcattagcaaagcaaatagcgacatcgctgcagaatttgcagtctaaaaccaacagggct
gttgcaaacagcagacctgccaaggctgctgtccacctagaagggaagattgagcaagct
cagagatggatagacaaccctacagttgatgaccgtggagtaggtcaggctgccatccgg
ggtcttgtggccgaaggtcgccgtcttgccaatgtcatgctgggaccttatcgccaggac
ctgctcgccaaatgtgaccgtgtggaacagctggctgtccagttagctgacctggcagca
cgaggcgaaggggaatctcctcaagccaaggcaattgctgcccagctgcaggactcattg
aaggatctgaaatcaaggatgcaagaagccatgacccaggaagtatctgatgtgttcagc
gacacgacaacaccaattaaactgttggcagtagcggccactgctcctccagacgccccc
aacagggacgaggtgtttgatgacagggcagccaattttgaaaaccatgctgccaggctt
ggagctactgcagaaaaggcagctgcagttggaacagccaacaaaagtactgtcgaaggc
atacaagcaactgtgaagtccgcaagagagctcactcctcaggtagtatctgccgctcgc
atccttctaaggaatcctggaaatcaagctgcttatgagcactttgagaccatgaagaac
cagtggattgataatgtggaaaaaatgacagggatggtggacgaagcaattgataccaag
tctctgttggatgcttccgaggaggccattaagaaagacctggacaagtgcaaagttgcg
atggccaacattcagccgcagatgcttgtcgctggggccaccagcattgcccggcgagca
aaccggattttgttagtggcaaagaaggaggtggaaaactcagaggatcccaagttccgg
gaagctgtgaaagctgcctctgatgacctgagcaaaactatttcgccaatggtgatggat
gcgaaagctgtggcaggaaacatttctgatcccggtttgcagaagaatttccttgattcc
ggctacaggatcctgggagctgtggccaaagtccgagaagctttccagccccaggaaccc
gacttcccccctccgcctcctgatcttgagcaacttcaccttacagatgaacttgctcct
cccaagccgccgctgccagagggcgaggttcctccccccaggcccccccctcctgaagag
aaggatgaagagttcccagaggcgaaggctggggaggtgctcaaccagcccatgatgatg
gctgccaggcagctccacgatgaagccagaaagtggtccagcaagcctgatgtgactgat
gaggttaaggaagcccctgaggctgatgtagatgtagatcaggaggaggaggaggaggag
gaggaagcagatgttgaattcactctcccctctgacattgaagatgattacgagcctgag
ctgctgttaatgccaaccaaccagcccgttaaccagcccattctggccgctgctcagtct
ctgcaccgggaagccaccaagtggtctagtaagggcaacgacatcatcgccgccgccaag
cggatggccctcctcatggccgagatgtcgcgcttggtcagaggcggcagtgggaacaag
cgggctctcatccagtgtgccaaggatatcgcgaaagcttccgacgaagtcaccaggctg
gccaaggaggtggcgaagcagtgcactgacaagcgcatcaggacaaaccttttgcaggtc
tgcgagcgaatcccaaccatcagcacacaactcaaaatcctctccactgtcaaagccacc
atgttgggccgcactaacatcagcgacgaggagtctgagcaggccacagagatgttggtt
cacaacgcccagaaccttatgcagtctgtcaaggaaacagttcgggaagctgaggccgcc
tccattaaaataagaacagatgctggattcactctacgctgggtcaggaaaactccttgg
taccagtag
DBGET
integrated database retrieval system
