Podarcis raffonei (Aeolian wall lizard): 128413840
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Entry
128413840 CDS
T09310
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128413840 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
praf04990
]
128413840 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
praf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128413840 (LDB3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128413840
NCBI-ProteinID:
XP_053244248
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All DBs
Position
5:complement(25101022..25256988)
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AA seq
808 aa
AA seq
DB search
MSYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDGM
THLEAQNKIKSASYNLSLTLQKSKRPAPVPTATPRIDSPMPVIPHQKDTVLEVNGNRASV
NPLSSTSAGSMSSILASNGAYSGYLSKQEMSLSHSSSFLKTVNIRSSVSSQSVASDLSPA
KSDLGAKTSSATTDGNSPKHQLSPARQYNNPIGLYSAETLREMAEMHKLSLTRRASEGGL
LRCSLPVKDPHVDSASPVYQAVLKTQNKPEDELDDWSRRSSHLQSRSFRILAQMTGTEYM
QDPDEDALRRSSGKKNVAGSPENSAAGTAHEAQYATSSVWHCPKSCSTDANTDRARAMAS
KGSVRFGTGTSQREASCHSAGQTVPPAFSSNQSTPVEHAPVSTSCAPSAVPPASANQPSA
AAHSAPHQMTLPSAAATSMVHDSISSSCQSVSHQSSTSITCQSKKRGPGQSYTSAPASHS
PAPYPGYSEAPAPASKPRVVTTASIRPSVYQPGSRTGADSDVRSGPDMLSERAAPAPAPV
PVHTQAPSQAEPSSRPPWITDDSFSQKFAPGKSTTTVTKHILPRGAPVPPLPASAPTYLP
PSIPASSQAPAVARGTIQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFYCAY
CKASLADVGFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTTCFVCAAC
RKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAV
CHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgactctcaacggacccggaccatgggggttccgactgcaagggggc
aaggacttcaatatgcctctgaccatctccagaattacgccaggcagcaaggcagctcaa
tcccagatgaaccagggggacttggtggtagcaattgatggagtcaacacagatggcatg
acccacctagaggcccagaacaagataaaatcagccagctacaacctgtctcttactctt
caaaaatcaaaacgtcctgctccagttcctacagccaccccaagaattgactctccaatg
cctgtgatccctcatcaaaaggatactgttctggaagtcaatggcaaccgagcaagcgtc
aatcctctaagtagcacatcggctgggtccatgagtagcattttagcaagcaatggagca
tattcaggctacctcagcaaacaagagatgagcctgtcacatagttcctccttcttaaag
actgtcaacattagatcttcagtgtcttctcagtctgtggcatctgacctttcaccagca
aaaagtgacctaggtgccaaaacaagctcagcgaccacagatggcaatagccctaaacac
cagctaagcccggcaaggcaatataacaaccccattggcctttactcagcagaaactcta
agggaaatggctgagatgcataagttaagtctcacacgaagggcttcagaaggtggactt
cttagatgtagcctccctgttaaagatcctcatgtagacagtgcctctccagtgtatcag
gctgtgcttaaaactcagaacaagcctgaagatgagcttgatgattggagtcgccgttct
tcccacttgcagtccaggtccttccgtatcctggctcagatgacaggaactgagtacatg
caagatccagatgaagatgccctgaggagatcaagtggcaagaaaaatgttgctggatct
cccgaaaacagcgctgcaggtactgctcacgaggcacagtatgcgacgtcaagtgtttgg
cattgccctaagtcttgcagcacagatgccaacactgacagagctagagcaatggcctcc
aaagggtccgtgagatttgggactggtacaagtcagagggaagccagctgccacagtgct
ggccagacagtccctcctgctttctccagtaaccaaagtacccctgttgagcatgcgcca
gtgtctaccagctgtgccccttctgctgtgccgcctgcttcagccaatcagccttctgct
gccgctcacagtgcccctcatcagatgaccctgccgtcagccgcggccacttccatggtg
cacgactccatctcgtcttcttgccaaagcgtcagtcaccagtcttctacttccatcacc
tgccagtccaaaaagagaggcccaggccaatcttacacatcagctccagcttcccacagc
cctgctccttacccaggctacagcgaagccccggctcctgcctcaaagcccagagttgtc
accactgccagcatcaggccttcagtctatcagccaggcagcaggactggagcagattca
gatgtcaggagtgggcctgacatgctgtcagaaagagcagctccggcgccagccccagtg
cctgtacacacccaagctccaagccaagcggagccttcaagccgtcctccctggatcacg
gacgactccttctcccagaagtttgctccggggaaaagcaccaccactgtcaccaagcat
atcctgccacggggggctccggtgccacccctgccagcctcggcccccacgtacctgcct
ccttccatcccggcctcttcccaggctccggcagttgcccggggaacgattcaaagggct
gagcgcttcccagccagcagccggactccgctgtgcggacactgtaatagcatcatcagg
ggtcctttcctggtagccatgggtcgttcttggcatcctgaggaattttactgcgcatac
tgcaaggcatccctggctgacgtcggctttgttgaggagcagaacagtgtgtactgtgag
cgttgctatgagcaattctttgcccctacctgtgccagatgccacaccaagatcatgggg
gaagtgatgcatgcccttcggcagacttggcacacaacttgctttgtctgtgctgcctgc
aggaagccatttgggaatagcctcttccatatggaggatggagagccctactgtgagaaa
gactatgtggccttgttcagcaccaaatgccatgggtgcgacttccctgtcgaagcagga
gacaagttcatcgaagcccttggacacacttggcacgacacctgcttcatttgtgctgtg
tgccatgtgaatttggaaggccagccattttattcgaagaaggataagccgctatgcaag
aagcatgcacacgccatcaatgtctaa
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