Podarcis raffonei (Aeolian wall lizard): 128413886
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Entry
128413886 CDS
T09310
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128413886 (JMJD1C)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128413886 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
FYVE
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
128413886
NCBI-ProteinID:
XP_053244352
LinkDB
All DBs
Position
5:complement(28945966..29063006)
Genome browser
AA seq
2527 aa
AA seq
DB search
MAVAVESRPELVGKRFLCVGGDEPPENGRWRAGVIRTVSHRDSRSPELSVYVEFDDLEWE
KREWIKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKTKHIQWPALTFKPLVGKSLYNSITA
VEFLVDKQLDFVAEDSAFQPYQDDVDSLNPVLRDNPQLQEEVKIWVKEQKVQEIFMQGPY
SLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFLDDVV
HSLLKGENIGITSRRRSRSNQNSNTAHGHYTRAQANSPRPAMNSQSAAPKQNSHHQQRNA
RPHKRKGSDSSVPDEEKTKEEKYDYISQGENSKNKSKHFISKRRKPEDDEKKLGMKRQRI
DNTSDYSESSDSENSNKRLTDSSSEQNSENELKSKNTSKINGKEGKSQSSDGIEEQTLID
SQSPWHEIQEDKKHQETDRPESADLELQEISLHQAEQPTVYDRNANDVCIQECSIEKQQP
RELLPNEQFVPSCHTPKGCIDINIENSSTIEPQENISNTFGLQTRQKMEPPGSDTKHLFT
NSSFLEVRKLETDENWINNANKMDLIQPKVVKSTSANEHHNSEKVPYGSVSSLTVISIAE
EGRVRKQSPVSDVVKSKAGPLIETPKIKSNSSPEVKYKHAQSPDTVKSKVNYQNSHVTGV
TRSAIKTEHDLPRSSFHPVPARVSSIEATKSPLIIDKNEHFTVYRDPALIGQETGTNHIS
PYLHQHNYPPHSTSHRTCLNPNTHHPALTGASHLLAGSSNQTPLSAINTHPLSSTSHHSV
HHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHP
SATYNHLGLYPIIWQYPNGTHAYSGLGIPSSKWVHSEASVNTEAPLRRNTPSPWLHQPTP
VTSADGLGLMSHIPVRPSSAEPHRPLKLTTHSSPPLSKSIADHHKEELERKGIFEPLRSV
AATPAKSDVEHNRSQTAKEGHLQRHFVDPLQRSLQETGERLSKYKEEHRRILQESIEVAP
FTAKIKALEGERESYSRILPLSSSSPKSHGVKHEKDSELYKMKHSVPQNLPQSNYFTTLS
NSVVNEPPRTYSSKEVSGMCADKQSSCPSTASAQSLTSFTTSLSKPPPLIKHPPESESSI
GKITEQFSQQATSNSANSFRNDSRSPTQLSVSSSSTLRTMPALHRAPVFHPPVHHSLERK
EGSYNSLSPPTLTPVQPVNAGSKIHELQKPPTLVPEPKEAQNVYKSALEQKFSDIWKNNN
IPNNDKMEWHIERKLPSATASVIVRPPSRTKYDTVSVVQTAPKERVVERSLMGINQTDCP
KPAEARETGRIVMPTVNSDTIHAQYEKNLPAASQGTVPSFVTPTTTTLCSTKTDVTASVA
TTGVPIMGSSEVTYCLSNAALACTSVESTASTAINQEVAHIQECGLSTAAPVTLACSKTE
SVLQASSGFSGPSDFIHLKKHKAALAAAQFKSSGASDTELTAAKNPIYPASVSLDSTVIS
GTINKANTVGNGQVSQTSQGNYHTKLKKAWLTRHSEEDKNTNKKENSGNSVSEIIKPCTV
NLIASTSNDLQNNIDCKMLGEKLAKEEKQTRRKTKRTYESGSESGDSDESESKSEQRTKR
QPKPTYKKKQNDLQKKKGDAEEEIKPNGVLSRSAKEKSKLKLQSSSSNSGIPRSVLKDWR
KVKKLKQTGESFLQDDSCYEIGPNLQKCRECRLVRSKKGEESAHSPVFCRFYYFRRLSFS
KNGVVRIDGFSSPDQYDDEAMSLWTHDNYDDDEIDLETCKYILDHIGDKFCQLVTSEKTA
MSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDK
ELYAWMKCVKGQPHDHKHLMPTQIIPGTVLMELLEAMHNLREKHEIRAHCQCASKQNLQP
GKFPSMNGVSQILQNVLNHSNKISLCIPELQQQKASQKSETNGNTSPGSDVSTDSKLTPP
ESQSPLHWLADLAEQKAREEKKENKDCPLGKHTKEEQDQDSSESLNYKMPTPLSQNSEQG
STLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASSKGGRTMPNILEDIIASVVENKIPP
NRTPKINVKSEVKEEPKDERKIITDDCSTLFSDVPHSWLCDKHILWLSDHKNSNNWKLFK
DCWKQGKPVLVSGIQKKLNASLWKADFISSDFGDLKADLLNCKDSITSSGSVKEFWDGFE
EVSKHSLISSLFAERQKIKNGETVILKLKDFPSGDDFKTMMPARYEDLLKCLPLPEYCNP
EGKLNLASYLPGFFVRPDLGPRLCSSYGVAAAKDHDIGTTNLHIEVSDMVNILVSVGIAK
GNGVPSKSVVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYASKDADKIREFLQKMAKEQ
GLDVLPEHDPIRDQSWYVNRKLRQRLFEEYGVKTCTLIQFLGDAIVLPAGALHQVQNFHS
CIQVTEDFVSPEHLIQSFHLTQELRLSKEEINYDDKLQIKNILYHTVKEMVRALKIHEHE
LEDMEEN
NT seq
7584 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtggagtcgcggccggagctggtggggaagcggttcttgtgcgttgga
ggagacgagccgcccgagaacgggcgttggagagccggcgtcatccgcaccgtctcgcac
cgggactcgcggagccccgagttgtcggtatatgtggaatttgatgaccttgaatgggaa
aaacgagaatggattaaagtttatgaagattttgcagccttcttggtggagtaccagctg
gtctgggcaaagagaaaggatcctagccagactcagggatcaaagaccaagcatattcag
tggcctgcactgacgttcaaaccattggttgggaaaagtttgtacaattctatcactgca
gttgaatttcttgtggacaaacagctggattttgtagcggaagatagtgcctttcagccc
tatcaggacgacgtagacagtttaaacccagttctcagggacaacccacagcttcaggag
gaagtaaaaatctgggtaaaggaacaaaaggtgcaagagatttttatgcaaggaccatat
tccttaaacggctatagagtgagagtatacagacaggactctgccacccagtggttcact
ggtataataactcatcatgatctatttactcgcactatgattgttatgaatgatcaggtt
ttagaaccacaaaatgtggatccctctatggttcagatgacctttctagatgatgttgtt
cactctttgttgaaaggtgaaaatattggcattacatcacgacgcaggtctcgttccaac
cagaacagcaacacagcccacggccactatacccgggcacaggcaaatagtcccaggcca
gcaatgaattcccagagtgcagcacctaagcaaaattcacatcaccagcagcggaatgct
cgtccacataaaaggaaaggctctgatagcagtgtgcctgatgaagaaaagacaaaagag
gaaaaatatgactatatcagtcaaggagaaaattccaaaaataagagcaaacactttatt
tccaaaagaagaaaaccagaagatgatgaaaagaaactcggtatgaagaggcagcggata
gacaacacttcagactattctgagagcagtgactcagaaaattcaaacaaaagactgaca
gattcttcgtcggagcagaattcagagaacgaattgaaaagcaagaacacttcaaagata
aatgggaaagaaggaaaatcccagagcagtgatggtatagaggaacaaacactaatagac
agccagtcaccctggcacgagatacaggaagataaaaaacatcaagaaaccgataggcca
gagtcagctgacttggagctgcaagaaatttcactccatcaagctgagcagccaacagtt
tatgataggaatgcgaatgatgtatgcattcaagagtgcagtatagaaaagcaacaaccc
agggagctcttaccgaatgagcagtttgtgcccagttgccatacaccaaaaggttgtatt
gatataaatattgaaaacagttcaactattgagccccaggaaaacatatcaaatactttt
ggtttgcaaactcgtcagaaaatggagcctccaggtagtgatacaaaacatctgtttaca
aattcaagctttctggaagtgagaaagctggaaactgatgaaaactggattaataatgcc
aacaaaatggatttgatacaaccaaaagttgtaaaaagtacatcagcaaatgaacatcat
aattctgaaaaagttccgtatggctctgtttcatctttaactgtcatttccatagcagaa
gagggcagagtacgtaaacaaagtccagtctctgatgtagtgaagtcaaaagctggccca
ctgattgaaacccctaaaatcaagtcaaattcttcacctgaagttaaatataaacacgcc
caatctcccgacactgtgaagtctaaggttaattaccagaacagccatgttactggagta
acaaggtcagcaattaaaactgaacatgatttgcctaggtctagctttcatccagttcca
gctagagttagttcaatagaagctactaaaagtcctcttatcattgacaagaatgaacat
ttcacagtttacagagatcccgctcttattggacaagaaacgggaactaaccatatatca
ccctatttacatcagcataactatcctcctcattccacttcccatagaacttgtttaaat
ccaaacactcatcaccccgcattaactggtgcatcccatttgttagctgggtcctcaaac
caaactcctttgtctgctattaatacacatcctcttagtagtacatctcaccattctgtt
catcacccgcatctacttcctgcagtgttacctggagtgcctacagcctctctgttggga
ggccatccacgactagagactgctcatgctagcagcttaagccatttggcattagcacac
cagcaacagcaacagatgctacagcaccagtcaccacatcttcttgggcaagctcaccct
tctgctacgtataatcacctgggactttatccaattatttggcagtatcccaacggaaca
catgcatactcaggacttggaataccttcatctaaatgggtccattctgaagcttctgtt
aatactgaggctcctctgagaaggaatactcctagtccttggttacaccagcccacccct
gtgacctcagctgacggtcttgggttaatgagccacatacctgtaagaccatccagtgca
gaaccacatcggccacttaaattgacgacacactctagtcctccattgtcaaaaagtata
gcggatcatcataaagaagaattggaaaggaaaggaatttttgaacctttacgttcagtt
gcagcgactccagcaaagtcagatgtagagcataacagatcacagaccgcaaaagagggc
catttgcaaagacactttgtagacccactacaaaggtcacttcaagagacaggcgagagg
ctaagcaagtataaagaagagcacaggaggatacttcaagaaagtattgaggttgctcct
tttactgctaaaatcaaggcacttgagggtgaaagggaatcatattccagaatattgcca
ttatcatcctctagccccaaaagccatggagtaaaacatgagaaagattcagaactttac
aagatgaagcattctgtaccacagaacttgccacaaagcaactattttaccactttgtct
aacagtgtggtcaacgaaccaccacgaacatactcctccaaagaggtttcaggtatgtgt
gccgataaacagagcagttgtccttcaacagcttctgctcagtcactcacttctttcact
acatctctttcaaaaccaccacctttgattaaacacccaccagagtctgaaagctcaata
ggcaagataacagagcagttttcacagcaagcgacctctaattcagcaaattctttcaga
aatgactccagaagtcctactcagttgtctgtttcatcctcaagtacactccgaacaatg
cccgctttgcacagggcaccggtctttcaccctccagtccatcacagtttggagaggaag
gaaggaagttacaatagcctttctcctccaaccttaactccagtgcagccagttaatgct
ggtagcaaaatccacgaattacagaagccaccaactctagtacctgagccgaaggaagca
caaaatgtttacaaaagtgctttggagcaaaaattttcagatatatggaaaaataataat
attccaaataatgacaaaatggaatggcacatagagaggaaattgccttctgccacagct
tctgtcattgtacgtccaccttcacgtacaaagtatgatacagtatctgtcgtgcagaca
gctccaaaagagcgagttgtcgaaagatcgctgatggggataaaccaaaccgattgtccc
aaaccagcggaagccagagagactggaagaatagttatgccgaccgtgaactcagacaca
attcatgcccagtatgaaaagaacttgccagctgcctcccagggcactgttcccagtttt
gtcacgccgactacgacgacactatgcagcaccaaaacggatgtaacagcatctgtggct
actactggcgttccaatcatgggcagttcagaagtgacttactgtttgtccaatgcagct
ttagcttgcacgtcagtagagagtactgcctccacagccataaaccaggaagtggcacac
atacaagaatgtggcctgagcaccgcagctccagttacattagcctgcagcaaaacggaa
agtgttcttcaggccagctctggattctctgggccatctgattttattcacttgaaaaag
cacaaggcagcattggctgctgctcagtttaaaagtagcggtgccagtgatacagagttg
actgctgcgaaaaatccaatatatccagcctccgtttccctcgacagtactgtcatctct
ggtacaataaacaaagcaaatactgtaggcaatgggcaagtatcccagacgagtcaaggg
aactaccacacgaagctgaaaaaagcttggctcacaagacattcggaagaagataaaaat
actaataaaaaagagaattcggggaacagtgtctcagaaatcattaagccatgtactgtt
aacttaatagcttctacatctaatgatttgcaaaataatatagattgtaaaatgctgggt
gaaaagcttgcgaaagaagagaaacagacaaggcgaaaaacgaaaaggacgtatgaatct
ggctctgaaagtggagattctgatgaaagtgagagcaaatcagagcaaaggactaagcgg
cagcctaagccaacttacaaaaagaaacagaatgatttgcaaaagaaaaaaggcgatgca
gaggaagaaataaagccaaatggtgttcttagcagaagtgccaaagaaaaaagcaaattg
aagttacagagcagcagcagcaattctggcatacctcgttcagtattaaaagactggcgt
aaagtaaagaagttgaaacagacgggagaatcctttttgcaggatgactcttgttatgaa
atcgggcccaatttgcagaaatgcagagaatgtagacttgtaagaagcaagaaaggagaa
gaatcagctcactcaccagtgttttgtagattctactactttcgtcggctttcttttagt
aagaatggagtggttaggattgatggcttttcttctcctgatcagtatgatgatgaagca
atgagtttatggacacatgataattatgatgatgatgaaattgacctagaaacttgcaaa
tacatcttagaccacataggtgacaaattttgtcagttagtgacatctgagaaaacagcc
atgtcctgggtcaaaaaggatgccaaaatagcttggaagagagcagtcagaggagtccgt
gaaatgtgtgatgcatgtgaagccactctgtttaacattcactgggtctgccaaaaatgt
ggatttgtggtctgcttagattgctataaggctaaggaaaggaagagttctagagataaa
gaattgtacgcctggatgaaatgtgtgaaagggcagcctcatgatcacaaacatttaatg
ccaacccagatcattcctggaacagtattaatggaacttcttgaagcaatgcataatctt
agagagaaacatgagattagagcccattgccagtgtgccagcaaacagaatttacaacct
ggcaagttcccttcaatgaatggtgtatctcagattttgcagaacgtccttaatcacagt
aataaaatttctctgtgcatacctgagttgcaacagcagaaggcatctcagaaatctgag
acaaacggtaatacaagcccaggaagtgacgtgagcacagacagcaagttaactcctcct
gaatcccaatcaccactgcactggttggcagatctagcagaacaaaaggccagggaagaa
aagaaagaaaacaaagactgccctcttggaaagcatacaaaggaagagcaggaccaagac
agttcagaatctcttaactacaagatgccaactcctttgtctcaaaatagcgagcagggc
tcaacgttacgagacctgctcaccactactgctggaaaactgcgtctcggctctacagat
gctggcattgcttttgcacccgtttattctacaggaactgcaagtagcaaaggtggaagg
acaatgccaaacattcttgaggacataattgcttcagttgtagaaaacaagattccacca
aatagaacaccaaagataaatgtaaaatctgaagtgaaggaagagccaaaggatgagaga
aaaattattacagatgattgcagcacattgttcagtgatgttccacattcatggctctgt
gataaacacattttgtggctcagtgatcataaaaacagcaacaactggaaacttttcaag
gattgttggaagcaaggaaagcccgtattagtgtctggaatacagaagaaactgaatgct
agcttatggaaggcagattttattagttcagattttggtgatctcaaagctgatctcttg
aattgcaaagacagcattacttccagtggcagtgtcaaggaattttgggatggctttgaa
gaagtttcaaaacactcactgatctcttcactgtttgcagaacggcaaaaaataaaaaat
ggagaaacagttatacttaagttgaaagactttccttcaggagacgatttcaagaccatg
atgcctgcaagatatgaagacttattaaaatgtttgccactgcctgaatattgcaaccca
gaaggaaaactgaatttagcttcatacttgccaggtttttttgtgcgcccagatctaggg
cccagattatgcagttcatatggtgtagctgctgctaaagatcatgatataggaactaca
aatcttcatattgaggtatctgacatggtgaacatccttgtcagcgttggcatagcaaaa
gggaatggcgttccttcaaaatcagtggtattaaagaagtttgaagaggaagatttggat
gatcttctaagaaaaagactgaaggattcaagtgaactgcctggtgctttgtggcacatt
tatgccagcaaggatgctgacaagataagggagtttctacagaagatggcaaaagaacaa
ggtttagatgttttgccagaacatgatccgatacgtgaccagagttggtatgtaaacaga
aaactccgtcaaagactttttgaagaatatggagtaaaaacctgcactctaatccagttc
cttggtgatgccattgttttaccagcaggagcacttcaccaggtacagaattttcatagc
tgtattcaagtaactgaagattttgtgtctccagagcaccttatacagtcatttcactta
acacaagaattgaggctctcgaaggaagaaatcaattatgatgataagctgcagattaaa
aatattttgtatcatacagttaaggaaatggtgagagctttgaagattcatgaacatgaa
ctagaagatatggaggaaaattaa
DBGET
integrated database retrieval system
