Podarcis raffonei (Aeolian wall lizard): 128413904
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Entry
128413904 CDS
T09310
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128413904 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128413904 (HERC4)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128413904 (HERC4)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
HECT type E3
128413904 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
YmaF
Motif
Other DBs
NCBI-GeneID:
128413904
NCBI-ProteinID:
XP_053244387
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All DBs
Position
5:complement(30495593..30525177)
Genome browser
AA seq
1060 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKRPEQVSALDAQNIVAVSCGEAHTLALNDSGQVYAWGFAADGQLGLPG
TEEYTRVPRNIKSLSDIQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYEFKKQTS
PQWIKSLQGIPFAQITAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLR
SQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNWLPYNGDIPLNSDREE
YYYVHRIFSGGDQSFSHYVTLQDLEPPDDFRYPCASKQIWTVNEGFIQRLLHCSSSGSGR
LPAEIANEIDGTFSSAGCLNGSFLAISHDDHYRTSARYSGIDMNTARLLFHKLIQPEHPH
ISQQVAASLEKNLIPKLTSSLPDVEALRLFLTLPECPLMSDANNYMTLAIPFATAIVNLE
KAPLKVLENWWSALEPPLFLKIVELYKDVVVHLLKLYKMGIPTSEQRIFSSCLHSSLKVL
EILHRVNERGGQIIQYDKFYIHELQDLIDIRSDYFHWIQQQAYGMDISHGLNELADVPVT
ICTYPFVFDAQAKTTLLQTDAVLQMQMAVDQAHRQNFSSIFLPVFESVNPCLILIVRRDN
IVGDTMEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYDE
QSRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVELHFPLALYKKLLNKKPSLDDLKEL
MPDVGRSMQQLLDYPEDDIEDTFCLNFTITVENFGTTEVKELIPNGTDIPVVKQNRQEFV
NAYVDYIFNKSVAPLYDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTQ
YKGEYWAENPTIKMFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLSLVIQPTGGGDE
YLPVSHTCFNLLDLPKYTDKEILRSKLIQAIDHNEGFNLV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggaaatgcctcttttggacagcttggattgggcggcattgatgaagaa
gttgtcctagaacccagaagatgcaactttttcataaacaaaaaggttcgagatgtaggc
tgtggactaagacacactgtgtttgtcttggatgatgggactgtgtatacatgtggatgt
aatgatttaggacaattaggacatgaaaaatccaggaaaagaccagagcaggtgagtgcc
ttggatgctcaaaatattgtagctgtttcatgtggagaagcccacacgttagcattaaat
gacagtggtcaagtctatgcttggggttttgctgcagatggacaacttggcttgcctgga
actgaggagtataccagagtgcccagaaacataaaaagcttgtcagacatccaaatagtg
caggttgcctgcggctactatcattcccttgcactctccaaaggtagtgaagtcttttcc
tggggacagaacaaacatggtcaactaggtttaggttatgaattcaaaaagcagacttcc
ccacaatggataaaatctttgcaagggataccttttgcgcaaattacagcgggcggagca
catagctttgtgcttactctttctggagcagtttttgggtggggacgcaacaaatttggc
caacttggtcttaatgatgaaaatgatagatacgttcccaatcttctaaagtcactaaga
tcccagaaaattgtttacatctcctgtggagaagatcatactgcggctcttacaaaggaa
ggtggggtgtttacttttggagctggaggctatgggcaattaggtcataactctactggc
catgagataaacccaagaaaagtttttgaacttatggggagcattgtcacacagattgct
tgtggaaggcagcacacatctgcatttgtcccttccactggaagaatttattcttttggt
cttggaggcaatggacagttgggcatgggatcaaccagtaacaggaaaagtcctttccca
gtgaaaggaaactggcttccttataatggagacatcccactaaattcagatcgtgaagaa
tattattatgtacataggattttctctggtggagaccaaagcttttcacattacgttact
ctacaggatttggaacctccagatgacttcagatacccatgtgcttcaaagcaaatctgg
actgtgaatgaaggcttcattcagaggttgctgcactgctcatcttcaggatcagggagg
ctccctgcagagatagcaaatgaaatcgacggaacattttcctcagctggctgtctaaat
ggaagttttttagctatcagccatgatgatcactacagaactagtgccagatactcaggg
attgacatgaatactgctcgacttctgtttcacaaacttatacagccggaacatcctcat
atatctcagcaggttgcagctagtttggaaaagaaccttattcctaaactgactagttcc
ttgcctgatgttgaagccctaagactgtttctaaccctgccagaatgcccactaatgagt
gacgcaaacaattacatgacactagctatcccatttgcaactgctattgtgaatctagaa
aaggctccactgaaagtacttgaaaactggtggtctgcattggagcctccattgttcctt
aaaatagtggaactttacaaggatgttgttgtccaccttcttaaattgtacaagatgggc
attccaacttcagagcaaagaatcttctctagctgcctgcactcttctctcaaggttttg
gaaattttgcacagggtaaatgaaagaggtgggcaaatcatacaatatgataaattctac
atacatgaactacaggatttgatagacataagaagtgactactttcactggattcagcag
caggcatatggaatggatatcagccatggattaaatgagctagcagatgtgccagttaca
atttgcacctacccatttgtgtttgacgcacaggcaaagacaacactcttgcagacagat
gcggttttacagatgcagatggctgttgaccaggctcacagacagaatttctcatctatt
tttctcccagtatttgaatctgtcaatccatgtctgatcttaattgtgcgcagagacaat
attgtgggggataccatggaagtcctaagaaaaacaaaaaatgttgactacaagaagcct
cttaaggttatttttgtaggggaagaagctgttgatgcaggaggagttcgcaaagaattt
ttcttgctcatcatgagagagctgttagatcccaagtatggaatgttcaggtacgatgaa
caatcgaggctcatctggttctcagataagacctttgaagacagtgacttgtttcatctg
attggtgttgtctgtgggctagcaatatataattttactattgtagagcttcacttcccc
ttggctttatataagaagctcctgaacaagaaaccttccctggatgacctcaaagagcta
atgcctgatgttggcaggagtatgcagcaattattggactacccagaagatgatatagag
gataccttctgcctcaactttacaatcactgttgaaaattttggtaccacggaagttaag
gagctaattcctaatggtactgatattcctgttgtcaaacaaaataggcaagagtttgtg
aatgcctacgtggactacatcttcaataaatctgtggctcctctctatgacgcattccat
gcaggctttcacaaggtgtgtggaggtaaagttctgcagctcttccagcccaacgaactg
caagcaatggtgattgggaatacaaactatgattggaaagaactagagaagaatactcaa
tacaaaggagaatattgggcagagaatccaacaattaaaatgttctgggaagtttttcat
gagttaccactggagaagaagaaacagtttttattatttttgacaggcagtgatcgtatt
cctattcttgggatgaagagccttagtcttgtcattcagccgactggaggtggtgatgag
tatctcccagtgtctcacacatgttttaatcttcttgatcttccaaaatatacagataaa
gaaatactcagatctaagctgatccaagctattgatcacaatgaaggtttcaatttagta
taa
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