Podarcis raffonei (Aeolian wall lizard): 128413918
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Entry
128413918 CDS
T09310
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
praf03009
]
128413918 (DDX21)
03036 Chromosome and associated proteins [BR:
praf03036
]
128413918 (DDX21)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128413918 (DDX21)
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
Pre-60S particles
Helicases
128413918 (DDX21)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128413918 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
128413918
NCBI-ProteinID:
XP_053244429
LinkDB
All DBs
Position
5:30871110..30886586
Genome browser
AA seq
806 aa
AA seq
DB search
MGCLGRCLTQHYARSPALQALGLVRSRALPSSRATSDRSASSAPGLPTFRSPCWRGWAWP
RAASRSQAPPRFLVSSAAGAGLFPFTPASALSSRLCHHLSGEDSQEMPAAPRPDYESEDE
MEPRTPMDAEAALEGSGKKRKKDKKDKSKKHKMKIKETPTEENELSDTELEPPKPKKSKK
KKEVFDDIEVIIAEHNTTSSITNGVGKSKKQGNAEESNTECESDQDQELTEEQKEGDFAN
FNLSKATIDLLKARGVTYLFPVQVKTYKHISDGKDVIAQARTGTGKTFSFAIPLIEKLQG
DPQERKRGRTPKVLVLTPTRELAMQVARDFKDVTRKLTVACFYGGTAYNGQLDLMRNGID
ILVGTPGRIKDHLQNNKLDISNLKHVVLDEVDQMLDMGFAEQVEEILAYAYKKDSEDNPQ
TLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKKTQKTAMNVEHLAIECHWSQRAAVIGDV
IQVYSGSHGRTIIFCETKKEATELALNASIKQDAQSLHGDIPQKQREVTLKGFRNGSFGV
LVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGMCICFYQRKEDYQLR
QVEQKAGITFKRVGVPTATDIIKASSKDALRSLDSVPPSAIDHFRQAAERLIEEKGAVEA
LAAALAHISGATAIEQRSLLNSDAGFVTMTLQCSVEMHTIGYAWRGLKEQLGEDIDSKVS
RMRFLKGKTGVCFDIPVAELNKVQQTWQDTRRWQLSVATELPELEESRDSGRSGGSDFRN
GRRGGGSNRHDRFRNRGQKRSHSRAF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctcggccgctgcctcacgcagcactacgcccgctcgccggccctgcaggct
ttgggcctcgtccgctcccgggctttgccctcctcccgcgccaccagcgaccgctcggct
tcctcagccccgggcctccccacgtttcgctccccctgttggcggggctgggcctggcca
agagccgcctcccgcagccaagcgccgcctcgcttcctcgtcagcagcgccgccggggcg
gggctctttccttttaccccggcgtcggccttgagcagccgcttgtgccaccacctcagc
ggagaagattcccaggaaatgcccgcagccccccggccagactacgagagtgaggacgag
atggagccccgcaccccgatggacgccgaggccgccctggagggcagcggcaagaagcgc
aagaaggataaaaaagataaatctaaaaagcataaaatgaaaattaaagaaacaccaaca
gaggagaatgaactgtctgatacagaattggaaccacccaaaccaaagaaaagtaagaaa
aagaaagaagtttttgatgacattgaagtcataattgcggaacacaatacaacatcctcc
atcactaatggggttggcaagtcaaaaaagcagggtaatgctgaagaatcaaatacggaa
tgtgagagtgaccaagatcaggaattgactgaagagcaaaaggaaggagactttgccaac
tttaatctctctaaagcaacaattgaccttctgaaagcccgtggagttacctacctgttt
ccagttcaagtaaagacttacaagcatatttctgatggcaaagatgtaatagcccaagct
cggactggaaccgggaaaaccttctcttttgccattcctttaattgaaaaacttcaggga
gatccccaggaaagaaaaagaggccgcacaccaaaggttttggtcctcactccaaccaga
gagttggcaatgcaagtagccagagacttcaaagatgtcacaaggaaactcactgtggct
tgcttctatggaggaacagcatacaatggacaacttgatcttatgcgtaatggcattgac
atcctggttgggactccaggtcgaattaaagaccatcttcaaaataacaaattggacatt
tccaatctaaagcatgttgtcctggatgaagttgaccagatgttggacatgggatttgcg
gaacaagtagaggaaattttagcatatgcttataaaaaagattctgaagacaatccacag
acattactcttttctgcaacttgcccacattgggtttatgatgtagcaaagaaatacatg
aaatctagatatgagcaaattgatcttattggaaagaagactcaaaagactgcaatgaat
gtagaacatttggctattgaatgtcattggtcccagagagctgcagtcattggagacgtt
attcaagtctacagtggtagtcatggacgtaccatcatattttgtgagaccaaaaaagaa
gcaactgaactggccctgaatgcctcaataaaacaggatgcacagtctttacatggtgat
attccacaaaagcagagagaagttacactgaaaggctttcgcaatggatcatttggagtt
ctggttgcaaccaatgtagctgcccgaggtttagatatcccagaggttgatctggtaata
caaagttcaccaccaaaggatgtagagtcctatattcatcgttctgggcgcacaggtcga
gctggccgaactgggatgtgcatctgtttctatcagcgcaaggaagattatcagctgaga
caagtagaacaaaaagcggggattacatttaaacgcgtgggtgttcctacagcaacggac
attattaaggcttccagtaaagatgctctcagatctttggattccgttcctccatctgcc
attgaccacttcagacaggcagctgaacggctgatagaggaaaagggggcagtggaagct
ctggctgccgcactggctcatatttctggagctactgccattgaacagcgttctttgctc
aactcggatgcgggttttgtgaccatgactcttcagtgttcagtagaaatgcacaccatt
ggctatgcttggcgaggtctgaaagaacagctgggtgaggacattgacagcaaagtgtcc
cgaatgcgctttcttaaggggaagacgggtgtgtgctttgatattcctgtggctgaacta
aataaagtacagcaaacatggcaggatacaagacgctggcaactttctgtggcaacagaa
ttgcccgagcttgaagaatcacgtgacagcggccgaagtggtggctcggatttcaggaat
ggaaggcgaggtggcggctccaacaggcatgacagattcagaaacaggggccaaaaaaga
agccatagccgggctttttga
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