Podarcis raffonei (Aeolian wall lizard): 128414058
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Entry
128414058 CDS
T09310
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128414058 (MYOF)
Membrane trafficking [BR:
praf04131
]
Endosome - Lysosome transport
Others
Ferlins
128414058 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Laminin_I
Motif
Other DBs
NCBI-GeneID:
128414058
NCBI-ProteinID:
XP_053244705
LinkDB
All DBs
Position
5:38772470..38849200
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AA seq
2061 aa
AA seq
DB search
MLRVIVESASNIPRHTFGKPDPIVSVIFKDEKKKTKKIDSELNPVWNEILEFDLKGIALD
ISSVLQIIVKDFETIGQNKLIGTATVSLKELVGTQSRSLPFKLVPLLNEKGLETGATIDL
VVGYEPPAGPPNPNDPGGTDAQGIEDGEEDGGDEESPDGGAGPVPQGGPRATRETQLARR
IAKGKQNRKLLSNKPQDFQIRVRVIEGRQFSGNNIKPVVKVHICGQTHRTRIKRGNNPYF
DEMFYYNVHMTPSELFDETISIRVYDSYSLRADSLMGEFKIDIGYVYDEPGHAAMRKWLL
LNDPEDSNSGAKGYLKVSMFVLGTGDEPPVENRERENENDDVESNLLLPAGIVLRWVTFV
LKIYRAEDIPQMDDAFAQTVKEIFGGEADKKNLVDPFVEVCFAGKKVCTNIIEKNANPVW
NQLVNLQIKFPSMCEKIRLVVYDWDRLTRNDVVGTTYLSLSKIAASGGEVEEFSSSGAGA
SSYEVNTGETEVGFLPTFGPCYLNLYGSPREYTGFPDPYDDLNSGKGEGVSYRGRILVEL
TTLLDSKPLSKKIEMIPSDDVLVVEKYQRRRKYSLSAVFHSATMLQDIGEAIQFEVSIGN
YGNKFDTTCKPLASTTQYSRAVFDGNFYYYLPWANTKPVVTLTSYWEDISHRLDPLNLLL
AIVEKLQTNLTALKSGIQAKVSENQLTETWLKLIDELMEDLSKEFPSQQGKHNVTVLDTQ
IYKLREKSIRQIQEAALKMRSEATDIKATLTEIEDWLEKLILLSEEPQNSMPDVIVWMIR
GEKRLAYARIPAHEVLYSTIPGASGKFCGKSRTVFLKYPQDKNNGNKIPAQLRISFWLGL
SAVEKKFNSFAEGTFSVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREYFLPP
KGWDWKDDWFIDPERSLLTEADAGHTEFADEVYQNESRYPGGEWKAAEDTFTDVNGEKAP
PPGEITCPPGWMWEDDAWIYDINRAVDEKAWEYGITIPPDDKPKSWVAAEKMYHTHRRRR
LVRRRRKDPNQTVSSRATTPYEDQEGWEFASLIGWKFHWKQRSSDTFRRRRWRREMIPSD
TCGSSAIFKLEGALGADTSIDEGEKSSEKTKEAAATRIFGASTPIISCNFDRVYSYHLRC
YIYQARNLIALDKDSFSDPYAHVSFLHRSKTTETIKSTLNPTWDQTIIFDEIEIYGDPYT
VEQNPPHVVVELFDSDQVGKDEFLGRTSCCPMVKLNPDIDISPKLLWYPVMNGGKACGDV
LLAAELLLSEKGGTNLPILPSKKASNLYMVPQGIRPVVQRTVIEILAWGLRNMKSYQMAS
VTSPSLIIECGGEMIESVVIKNLKKTPNFPGSVLCMTVSLPKEELYTPSLVIKVIDHRQF
GRKPIVGQCTIGALERFRCDPYATKADIAPQMKVTLLSAAPRRDVVIEVEDTQPLLAAQL
TEKEEEIVDWWSKFYASIGDTEKCGQYIAKGYDTLKVYKSELENVPDFRGLTDFCDTFKL
HRGRSEENDDPSVVGEFKGSFRIYALPDDPNVPPPPRQFRELPDSGPQECIIRIYIVRGL
ELQPKDNNGMCDPYIKITLGKKVVEDRDHYIPNTTNPIFGRMYELSCFLPQEKDLKISVY
DYDMLTRDEKVGETIIDLENRFLSRFGSQCGIPQQYCVSGINTWRDQLKPTQLLQNLARV
KGYSPPVLSENGRRISYGGREYTLEEFEANKKLHEHLGPGEERLALYILRTQGLVPEHVE
TRTLFSTFQPNISQGKLQMWVDVFPKSMGPPGPPFNITPRKAKKYELRVIVWNTKDVILD
EKSITGEEMSDIYVKGWMPGHEENKQKTDVHYRSLDGEGNFNWRFIFPFEYFPAEQLCTV
SKKEHFWSLDNTEFRIPPKLLIQIWDNDKFSLDDYLGFVELDLHNAIVPAKSPEKCSLDM
IPEYKPTNTLKTPKIASLFEQKSMRGWWPCYAEKDGSRVLAGKVEMTLEVLGEKDIDERP
AGKGRDEPNMNPKLEQPNRPDTSFLWFTNPCKTMKFIVWRRFKWVFIGILLLLIVLLFVA
ILLYSLPNYLSMKIVNPFSSG
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtaattgtggaatctgcttccaatatccctagacatacattcggaaaacca
gatcctatcgtgtccgttatttttaaagatgaaaaaaagaaaacaaagaaaattgatagt
gaactcaaccctgtttggaatgagattcttgagtttgatttgaaaggaatcgctctggat
atttcgtcagtcctgcagattattgtgaaagatttcgaaactatagggcaaaacaagtta
attggcacagcaactgtatccctcaaagaactagtaggcacacaaagcagatcgcttcca
ttcaagctcgttccactgctgaatgaaaagggactggaaaccggcgcaacaattgatttg
gtggtggggtatgagccaccagctggacctccgaatccaaatgacccagggggaacggat
gcacaaggcattgaagatggcgaagaagacggaggtgatgaggagtcgcctgatggtgga
gctggtcccgttccccagggcggtccacgtgccacccgcgaaactcagcttgctcgtcga
attgccaaaggaaagcaaaaccggaagctgctttctaacaagcctcaagacttccagatt
cgtgttagggtcattgaaggacgtcagttctctgggaataacataaagccagttgtgaaa
gtacacatttgtggccagacacacagaacaagaatcaaaagaggcaacaatccttatttt
gatgagatgttttactacaatgtccacatgaccccttcagagctctttgatgaaacaata
agcattcgggtatatgactcttattctttacgtgccgacagtctaatgggggaatttaaa
attgacattggctatgtctacgatgaacctggacacgcggccatgagaaaatggctgctt
ctaaatgaccctgaagattcaaattcaggtgccaaagggtacttgaaagtcagcatgttc
gttctcggaacaggagatgagccacctgtggaaaatagagaacgggagaatgaaaacgat
gatgtagaaagtaatcttttgctaccggctgggatagtgctccgatgggtcactttcgtt
cttaagatctacagagctgaagatattcctcagatggatgatgcttttgcacagactgta
aaggaaatatttggtggagaagcagataagaaaaaccttgtggatccatttgtggaagtt
tgctttgctgggaaaaaggtttgcacaaatataattgaaaaaaatgctaacccagtgtgg
aatcaacttgttaatcttcagatcaagttcccttcgatgtgtgaaaaaataagactggtg
gtgtacgattgggatcgcctcaccagaaatgatgttgtaggcaccacatacttgagcctc
tccaaaattgctgcttcggggggagaagttgaagagttttcatcttcgggagctggggct
tcatcatatgaagtaaataccggagagacagaagtgggcttcttaccaacatttgggcct
tgttatctaaacctttatggaagtccaagagaatatactggattcccagatccgtacgat
gatctaaattctggaaagggagagggggtatcttacagaggccggatcctggttgaacta
accacactgcttgacagcaaaccgctttctaaaaagattgaaatgatacccagtgatgat
gtactagtggttgagaaatatcaacggagaagaaagtacagcctcagcgccgtgttccat
tctgccaccatgttgcaagatattggcgaagccatccaatttgaagtcagcatagggaac
tatggcaataaatttgataccacctgcaaaccgctggcatcaacaactcagtacagtcgg
gctgtatttgatggaaacttctattactacctgccatgggcaaacacgaagccagtggtg
acacttacttcatattgggaggatataagtcatagactggaccctttgaaccttcttctt
gccatagtggaaaaactgcaaacaaacctgacagccttaaaatcaggaatacaagcaaag
gtttcggaaaaccagttgactgaaacatggctgaagctaatagatgagcttatggaggac
ctgagcaaggaattcccaagccagcaaggcaaacacaatgtcacggtccttgatacacag
atctacaaactgcgggagaaatcgatcagacagattcaggaggcagctctgaaaatgagg
agtgaagccacagatatcaaggccacactgacagaaattgaggattggctggaaaaatta
atactgctatctgaagagccacagaacagcatgcctgacgtgatcgtttggatgatccgg
ggggagaagaggcttgcctacgctcgcattcctgcccacgaggttttgtattccacaatt
cctggggcatctgggaaattttgtgggaagtcccggaccgtcttcttaaagtatccacag
gacaaaaacaatggcaacaaaatacccgcacagttgcgaattagtttttggcttggcttg
agtgcagtagaaaagaagtttaacagcttcgcagaaggaacatttagcgtctttgctgaa
atgtatgaaaaccaggcacttatgtttgggaagtggggaacttccggactcgttggccgc
cacaagttttccgatgtcacaggaaaaataaaactgaaaagagagtactttctgcctccc
aaaggatgggactggaaagacgactggttcattgatcctgaaagaagcttgctgacggaa
gcagatgctggtcacactgagtttgctgatgaagtgtatcaaaatgaaagccgctatcct
ggaggagaatggaaagcagctgaagacacttttacagatgtgaatggagaaaaagcacca
ccaccaggtgaaataacctgtcctccaggttggatgtgggaggatgatgcttggatatac
gatataaaccgagcagtggatgaaaaagcttgggaatatggaattaccattccccctgac
gataaacccaagtcgtgggttgcagcagagaaaatgtatcatactcatagaagaagaagg
ctggttcgaagacgcagaaaagatccaaaccaaacagtttcatcaagggcaaccacaccc
tatgaagatcaagaaggatgggaatttgcatcactgattggatggaaatttcactggaag
cagcgcagttccgacactttccgccgcaggcggtggaggagagaaatgattccttctgac
acatgtggttcatcagccatctttaagcttgaaggagctcttggagcagatacaagcatt
gatgagggagaaaaatcttctgagaagaccaaagaggcagcagcaacacgtatattcggt
gcaagcactcctataatctcttgcaactttgacagagtctacagttaccaccttcgatgt
tatatctatcaagcaagaaatctaatagctttggataaagacagcttttcagatccatat
gctcatgtttcattccttcaccgaagcaaaacaaccgaaaccatcaagtcaacattgaac
ccaacatgggatcaaactatcatatttgatgaaattgaaatctatggagatccctacacg
gtagaacaaaaccctcctcatgtggttgttgaactcttcgatagtgaccaagtgggcaaa
gatgagttccttggaagaacctcttgttgtcctatggtcaagctcaacccagatattgac
atcagtccgaaacttctctggtatccagttatgaatgggggcaaggcttgtggagatgtg
cttttagcagctgagcttttgctgagtgaaaagggtggaaccaaccttccaattcttcct
tcaaaaaaagcatcaaacctttacatggtgccacaaggaatcagacccgtggttcaacgg
actgttattgagatccttgcctggggactgcgcaacatgaaaagctaccaaatggcttct
gttacttcccctagtctcattatagagtgtggaggtgaaatgatagaatctgttgtgatt
aaaaacctgaagaagacaccaaattttcccggatctgttctctgcatgacagtgtcgctg
cccaaagaggaattgtacacgccatcactagttattaaagtgatagaccacaggcaattt
ggccgtaaacctatcgtgggacaatgtaccattggggcactggagcgttttcgctgtgat
ccttatgcgacgaaagccgacattgcaccacagatgaaagttactcttctgtcagctgca
cctcggcgagatgtggtcattgaagtggaagacacgcaacctttactagcagcgcagctc
acagaaaaggaggaagaaattgtcgactggtggagcaagttttatgcttcaataggagat
actgagaaatgtggacaatatattgcaaagggatacgatacgctaaaggtgtacaagagt
gaactggagaatgtacccgattttaggggtttaacagatttttgtgatactttcaagctg
catcggggcaggtctgaagaaaatgatgaccctagtgttgtgggagaatttaagggctct
tttaggatctacgcattaccagatgaccctaatgtaccacctcctcctcggcagttccgt
gaacttccagacagtgggcctcaagagtgtatcattcggatttatatagtccgaggctta
gaactccagcctaaggataacaatggaatgtgtgatccttatattaaaatcaccttgggc
aaaaaagtggtggaagacagagatcattatattcccaacactaccaatccaatttttggc
agaatgtacgaactgagttgcttcttgcctcaagagaaggatctgaaaatttctgtttat
gactatgatatgctgactcgagatgaaaaagttggtgaaaccatcattgatttggaaaac
agatttctctcccgctttggatctcaatgtggaataccacagcagtactgtgtctcaggt
atcaatacatggagagaccaactgaagccaacacaactcttgcaaaatttagccagggtc
aaaggctattctcccccagtcctttctgaaaacgggaggaggattagttatggaggaaga
gaatacactttggaagaatttgaggccaacaaaaaactgcatgaacaccttgggcctggt
gaagaacggcttgccctttacattctcagaactcagggcttggtgcctgagcatgtagag
acaagaactttgttcagtaccttccagccaaacatctcacaagggaagcttcagatgtgg
gtggatgttttccccaaaagcatgggtccacccggccctcctttcaacatcactcctcgc
aaggctaagaagtatgagctgcgggtaattgtgtggaacacaaaggatgtcatcctggat
gaaaaaagcatcacaggggaagaaatgagtgatatctatgtgaaaggatggatgcctggc
catgaagaaaataagcagaaaacagatgtgcattacaggtccctagacggggaagggaac
ttcaactggagatttatttttccttttgagtattttccagctgagcagctctgtacagtt
tcaaaaaaggaacacttttggagccttgacaatacagaattcagaattccacccaagctg
cttattcaaatatgggacaatgataagttttccttggatgactatcttggttttgttgaa
cttgatttgcacaatgcaattgtgccagcaaagtctccagaaaagtgctctttggacatg
attccagaatacaagccaactaacactctcaagacccctaagattgcttcactctttgaa
cagaaatccatgagaggatggtggccatgctatgcagaaaaagatggctcccgtgttttg
gctggtaaagttgagatgactctggaagttcttggtgaaaaagacattgatgaacggcca
gctggtaaaggcagagatgaacctaatatgaaccccaaattagagcaaccaaaccgacca
gatacatctttcctttggttcacaaatccatgcaagacaatgaagttcattgtgtggcgc
agatttaagtgggttttcattggcatcctcctcctcctgattgtgctcttgtttgtagca
attctactgtactcactgccgaactacctgtcaatgaagattgtgaatccattttcatct
ggttaa
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