Podarcis raffonei (Aeolian wall lizard): 128414209
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Entry
128414209 CDS
T09310
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
praf03016
]
128414209 (TRUB1)
Enzymes [BR:
praf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
128414209 (TRUB1)
Transfer RNA biogenesis [BR:
praf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128414209 (TRUB1)
Prokaryotic type
128414209 (TRUB1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
128414209
NCBI-ProteinID:
XP_053245076
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Position
5:complement(51565677..51604279)
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AA seq
287 aa
AA seq
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MSGAVVEAVRGKAVAAQLLSFSGLFAVYKPKGCTSAAVLNRLRAKLMAETGMPKPSRRKR
NKMLKIGHGGILDSSAAGVLVVGIGKGTKMLSSLLAGSKKYTAVGELGKATDTFDSTGKV
TEEKPYDWITKEDLENVLQKFTGSIMQVPPIYCALKRDGQRLSTLVKKGEVVEAKPARQV
MVYSLTLRSFKPPFFTLDVECGGGFYVRSLVNDIGKELSSCATVLELTRTKQGPFTLEEH
VLYEDKWTIDEIARSLECCMPLLQEEPPRKKLKMELSEECAMNSEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcggtggtggaggccgtccggggcaaagcagttgccgctcagctgctgtct
tttagcgggctcttcgccgtgtataagcccaagggatgcacctcagccgctgtgctgaac
cggcttagggcgaagctgatggcagaaaccggtatgccaaagcctagtagaaggaagagg
aataaaatgttaaagattggacatggtgggattctggatagcagtgctgcaggagtgcta
gtggttggcattggaaaaggaactaaaatgctgagcagcttgctggcaggttctaagaaa
tacacagctgttggggaattgggaaaggcaactgacacatttgattctacaggcaaagta
acagaagaaaaaccttacgactggataacaaaagaggatcttgagaatgtcctgcagaag
ttcacaggcagcatcatgcaagttcccccgatctattgtgccctgaagagagatggacag
aggttgtccactctggttaagaaaggagaagttgttgaagcaaagcctgccagacaagtt
atggtctacagtctcactcttaggagtttcaagccgccattcttcacgcttgatgttgaa
tgtggcggcggcttttatgtcagaagcttggtcaacgatattggcaaagagctgtcctcc
tgtgccactgtgctggaactgacccgaaccaaacagggaccgtttaccctagaagagcat
gttctttatgaagacaaatggaccattgatgaaattgcccggtctctggagtgttgcatg
cctctcctccaggaagaaccgcctcgtaaaaaattaaagatggagctgtctgaagaatgc
gccatgaactctgaagataagtga
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