Podarcis raffonei (Aeolian wall lizard): 128414232
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Entry
128414232 CDS
T09310
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128414232 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128414232 (VTI1A)
Membrane trafficking [BR:
praf04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
128414232 (VTI1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Laminin_II
Sec20
MMPL
Sec8_N
Orf78
DUF6987
Fusion_gly
DUF1664
Laminin_I
CAP59_mtransfer
DUF5344
GP41
RIFIN
SKA2
ZnuA
DUF7605
Motif
Other DBs
NCBI-GeneID:
128414232
NCBI-ProteinID:
XP_053245181
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All DBs
Position
5:complement(52946589..53191800)
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AA seq
224 aa
AA seq
DB search
MSSDFEGYEQDFSVLTAEITNRIGKVPKLLGDEKKQMVSNVEKQLEEARELLEQMELEVR
EIPPQSRGMYSSRMRSYKQEMEKLEADFKRSRIAYSDEVRNELLGDDGNSSEIQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQDILENLSNDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILLVILGIIVIFAVLMIIYFSVRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgactttgagggctacgagcaggacttctcggttctcaccgcggagatcacg
aaccgcatcgggaaggtgcccaagttgctcggagatgagaagaagcaaatggtttcaaat
gtggagaagcagctggaagaagcaagagagttgctggaacaaatggagcttgaagttcga
gaaatccctccacagagccgaggcatgtacagcagtagaatgaggagctacaagcaagaa
atggaaaaacttgaagcagattttaaaaggtcacggattgcctacagtgacgaggtgcgg
aatgagctcctaggggatgatgggaattcctcagagatccagttgataaaattacgtgaa
gagagggcgcatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaactgaacagattggccaggacatattggaaaatctc
agcaatgacagagagaagattcagcgtgctcgagaaagactcagagaaacagatgcaaac
ttgggcaagagttcaaggatccttacaggaatgttacgaaggatcattcaaaaccggatt
ttgttagttatcttggggatcatcgtcatctttgcagtcctgatgattatttatttttct
gtcaggggacactga
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