Podarcis raffonei (Aeolian wall lizard): 128414237
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Entry
128414237 CDS
T09310
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128414237 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_9
LRR_LRWD1
LRR_At5g56370
LRR_NLRC4
LRR_5
Motif
Other DBs
NCBI-GeneID:
128414237
NCBI-ProteinID:
XP_053245194
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Position
5:complement(53859283..53908059)
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AA seq
580 aa
AA seq
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MSSNLGKDCKEKDPKGSSAKEREKEAKTSGGFGKESKERELKTKGKEAKDGKKDSSGAQP
GVAFSVDNTIKRPNPAPGARKKSSNAEVIKELNKCREENSVRLDLAKRSIHILPPSVKEL
TQLTELYLYGNKLQSLPSEVGCLVNLVTLALNENSLTSLPDSLDNLKQLRMVDLRHNKLR
EIPPVVYRLRSLTTLYLRFNRITTVEKDIKNLSILIMLSIRENKIKQLPEEIGELFNLIT
LDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLSSLKSLGLRYNRLSAIPRS
LAQCSKLDELNLENNMISALPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNM
EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVS
GLVSLEVLVLSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRELQRLILTNNQ
LSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSK
LSIMSIENCPLNTLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatcttgggaaagattgtaaggagaaggacccaaaagggtcttcagcaaag
gaaagggagaaggaggccaagacttctggtggatttgggaaagaaagcaaagagagagag
cttaagaccaaagggaaagaagccaaagatgggaagaaggactccagcggtgcacagccg
ggtgtggctttttcagtggacaatacaataaaacgacctaatccagctccaggtgctcgc
aagaaatccagcaatgccgaggtgatcaaagagctaaacaaatgtcgggaagaaaattca
gtacgcttggacttggccaagaggtcgatacacatactcccaccatctgtcaaagagtta
acgcagttgacggaactttatttatatggaaacaaactgcagtcactaccgtctgaggtg
ggctgccttgtgaatctggtgacactggccctgaacgagaactcacttaccagcctccct
gactctcttgataacttgaagcagcttcgcatggttgatttacgacacaacaaactgaga
gaaattcctccagtggtgtacaggctaaggtctctcaccacactttatctacgctttaat
cgtatcacaactgtggaaaaggatatcaaaaacttgtcgatactcatcatgctcagcata
cgggagaacaaaatcaagcaactacctgaagaaattggtgagttgtttaacctcataaca
ctggatgtagcacacaatcagcttgagcatcttccaaaggagattggaaattgtacacag
atcaccaaacttgacctacagcacaacgagctcctggaccttccagataccataggaaac
ctgtccagtctgaaaagcctcgggctgaggtataaccggctctcagcaatacccaggtct
ctagcacagtgcagtaaacttgatgaactgaatttggagaacaacatgatttctgcttta
ccagagggtctcttatccagtcttgtgaatctgaccagcctcactctggcaaggaactgt
ttccagtcatatccagtgggtggcccctcacagttctctaccatctacgctctcaatatg
gagcataaccgcatcaataaaatcccttttggaattttctccagagcaaaagtgttgagt
aagctgaacatgaaggacaatcagctgacgtcgcttcccttggactttgggacatggacc
agcatggtagaactgaacttagctacaaatcaactcaacaagattcctgaggatgtgtct
ggacttgtttccctagaggttcttgtcttgtcgaacaaccttctaagaaaccttccccat
ggcattgggaacctgcgaaagttaagagaattggatctagaggaaaacaagctggaatcc
ttgcccaatgaaatcgcgtaccttcgggaacttcagaggttgatcttaacaaataatcag
ttgagcacccttcctagaggaattggccacctcatcaatctgacacatcttggactggga
gagaattttcttacacaacttcctgaggaaattggtacactggagaatctggaagaactg
tatctaaatgacaaccctcatctgaacagccttccttttgaactggccctctgcagtaaa
ttgtctataatgagcattgagaactgcccactcaatacccttccagctcaaattgttgca
ggtggaccttcctttatcatccagtttctcaaaatgcagggaccatatcgtgccatggtc
tga
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