Podarcis raffonei (Aeolian wall lizard): 128414243
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Entry
128414243 CDS
T09310
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04110
Cell cycle
praf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128414243 (SMC3)
04114 Oocyte meiosis
128414243 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128414243 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
praf00535
]
128414243 (SMC3)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128414243 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
128414243 (SMC3)
Proteoglycans [BR:
praf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
128414243 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
128414243
NCBI-ProteinID:
XP_053245219
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All DBs
Position
5:complement(54080312..54109280)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKTKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKVEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGGAESEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaacaggtgatcattcaggggttccgaagctaccgagatcagactatagta
gatcccttcagttcaaagcataatgtcattgtgggcagaaatggttctggaaaaagcaac
tttttctatgcaattcagtttgttctcagtgatgaattcagtcatcttcgtcctgagcaa
aggttggctttgttgcatgaaggcacaggtcctcgtgttatttctgcttttgtggaaatc
atctttgacaactcggacaacaggttaccaattgataaagaagaagtatctcttcgcaga
gtcattggcgctaaaaaggaccagtatttcctagacaagaaaatggtgacgaaaaatgat
gtgatgaaccttcttgaaagtgctggattttctcgcagcaacccctactatattgtcaag
caaggaaagatcaaccagatggccacagctcctgactctcagagattaaaactgttaaga
gaagtagctggcactagggtatatgatgaacgtaaagaagagagtatctccttaatgaaa
gaaacagaggggaaaagggagaaaataaatgagctgttgaaatatatagaagagcgatta
catactttggaagaggagaaagaagagcttgctcaatatcaaaagtgggataaaatgaga
agagcactggagtacaccatttataatcaggaacttaatgaaaccagggctaaacttgat
gagctttctgccaaaagggaaacaagtggagaaaaatcaaggcaattaagagatgcacag
caggatgctcgagataaaatggaggaaattgaacggcaggtccgagaacttaaaaccaag
atttcagctatgaaggaagaaaaggagcagctcagtgccgaaagacaggaacagattaaa
cagaggaccaaactagagcttaaaacaaaagacttgcaagatgaactggctggaaatagt
gaacaacggaaaagactcttgaaagagaggcagaaacttcttgagaaaattgaagaaaaa
cagaaagaactagcagaaacagaaccaaagttcaatagtgtaaaagaaaaagaggaacga
ggaattgccagactggcacaggccacccaggaaagaacagatctttatgcaaagcaaggt
cgaggaagtcagtttacatcaaaagaagagagagataaatggattaaaaaagaactgaaa
tccttagatcaagccatcaatgacaagaaacggcagattgctgctatacataaagattta
gaagacacggaggctaacaaagagaagaatctggagcagtatagtaaactggatcaggat
cttaatgaagtgaaagctcgtgttgaagaactggacagaaaatactatgaagtgaaaaac
aaaaaagatgaactacagagtgagagaaattacttgtggagagaagagaatgcagaacag
caagctcttgctgcaaaacgggaggacttggaaaagaaacagcagcttcttagagcagca
acaggaaaggctattctaaatggcattgacagcataaacaaagtcttggagcatttccgt
cgcaaaggcattaaccaacatgttcagaatggctatcatggaatagtaatgaataacttt
gagtgtgagcctgctttctacacctgtgttgaagttactgcaggaaacaggcttttttat
catattgtagattctgatgaagttagtaccaagatattaatggagttcaataaaatgaat
ctacctggagaagtaacttttctgcctctgaacaagctggatgttagagatactgcatac
cctgaaaccaatgatgctattcctatgatcagtaaactaagatacaatccaagatttgat
aaagccttcaagcatgtttttggaaagactcttatttgtcgtagtatggaagtgtctacc
cagctggccagagcttttactatggattgtattactctggaaggtgatcaagtcagccac
cgaggggctttgactgggggttattatgacacaagaaagtctcgacttgaactgcagaaa
gatgtaagaaaggtggaagaagaactaggagaacttgaagcaaagctcaatgaaaacctg
cgaagaaacattgaaaggattaataatgaaattgatcagctaatgaatcagatgcagcag
attgaaacccaacaaagaaaattcaaagcttccagagacagcatcttatcggagatgaaa
atgttgaaagagaagagacagcagtcagaaaaaacatttatgcccaagcaacgcagctta
caaagtttggaggcaagtttacatgctatggaatcaacccgggagtctttaaaagcagaa
ctggggacagacctgttgtcgcagctcagtttagaggaccagaaacgagttgatgcactt
aatgatgagatccgacagctacagcaagaaaacagacagcttttgaatgaaaggatcaag
cttgaggggatcatcacacgagtcgagacttatctcaatgagaatttgagaaagcgctta
gaccaagttgaacaagagctgaatgagctgagagagacagaaggtggcactgttcttaca
gcaacaacatcagagcttgaggctatcaacaaacgagtgaaagatacgctggcacgctca
gaagatctggacaattcaattgataaaacagaagcaggaatcaaagaactccaaaagagc
atggagcgctggaagaacatggagaaagagcacatggatgctattaatcatgacacaaaa
gagcttgaaaaaatgactaaccggcaaggcatgcttctgaagaagaaggaggagtgtatg
aagaaaatcagggaattgggatcacttccccaggaagcgttcgaaaaataccagactttg
agcctgaagcagctatttcgcaaactggaacaatgcaacacagaactcaaaaaatacagt
catgtcaataaaaaagctctagatcagtttgtgaacttctcagagcagaaggagaagttg
ataaaacgtcaagaagagttggacaggggctacaagtccatcatggagttgatgaatgtc
cttgaactcagaaaatatgaagcaatccagctgacattcaaacaggtctcaaagaacttc
agtgaagtctttcagaagctggtgcctggggggaaagctacactcgtgatgaagaaaggt
gatgtggaaggcagtcaatctcaagatgaaggtgaaggtggtgctgagagtgaaaaggga
tcaggatctcaaagtagtgttccttctgtagaccagttcactggagttgggattagggtg
tcatttactggcaaacaaggtgaaatgagagaaatgcagcagctttctggtggacagaag
tcacttgtggctctagccttaatttttgctatccagaaatgtgaccctgcgccgttttac
ctctttgatgaaattgatcaagccctagatgcccagcatagaaaggcagtttcagatatg
atcatggaactggcagaacatgctcaatttattacaacaactttcaggccagaactgctt
gagtctgctgataaattttacggtgtaaaattcagaaataaggtcagtcatattgatgtg
atcacagcagagatggccaaagactttgtggaagatgatactactcatggataa
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