Podarcis raffonei (Aeolian wall lizard): 128414268
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Entry
128414268 CDS
T09310
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128414268 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128414268 (TAF5)
03036 Chromosome and associated proteins [BR:
praf03036
]
128414268 (TAF5)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128414268 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
128414268 (TAF5)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128414268 (TAF5)
STAGA complex
128414268 (TAF5)
TFTC complex
128414268 (TAF5)
SAGA complex
128414268 (TAF5)
SLIK complex
128414268 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
CDK5RAP3
Cytochrom_D1
RAB3GAP2_N
eIF2A
Motif
Other DBs
NCBI-GeneID:
128414268
NCBI-ProteinID:
XP_053245288
LinkDB
All DBs
Position
5:complement(57209360..57221766)
Genome browser
AA seq
804 aa
AA seq
DB search
MAALPEEPAEAVTVKPDPDAGAPPAPPPPPPALPQSPAAAAGATAAAGVAAAPSAPSAAA
PLAEGGEPLAAGADAKPPVAPSPAPPASQLPTDRQTLLAVLQFLRRSNLRESEEILRREA
RLLADEVAADPGSSAPGVQASHGGEGQEPGGGAPGSGDVLLSSVTFSQSGATISPGAAAA
PPAVALGPPGKVGVFVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAEL
SQLFYPLFVHMYLELVYNGHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNET
MLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMV
GSLAGEAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDSMGSKSKK
QDPNAPPQTRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAV
DITDDSSMIVGGFADSTVRVWSVTPKKLRSVKSAADLSLIDKESDDVLERIMDERTASEL
KILYGHSGPVYGTSFSPDRNYLLSSSEDGTIRLWSLLTFSCLVGYKGHNYPIWDTQFSPY
GYYFISGGHDRVARLWATDHYQPLRIFAGHLADVTSTRFHPNSNYVATGSADRTVRLWDV
LNGNCVRIFTGHKGPVHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYT
LRFSRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDLLLGTYMSK
STPVTHLHFTRRNLLLAAGAYSPQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgccggaggagccggccgaagcagtcacagtgaagccggaccccgacgcg
ggagcgccgccggcgccaccccctcctcctcccgctctccctcagtcgccggcagcagca
gcgggagcgacggcggcagcgggagtcgctgccgctccctctgccccctcggccgccgct
cctctagcggaagggggcgagccgttggcggcaggagccgacgcgaagccgccggtggcg
cccagccctgcgccgcccgcttcgcagctgcccaccgaccggcagacgctgctggctgtg
ctgcagttcctgaggcgcagcaacctccgcgagtccgaggagatcctccgcagggaagcc
cggctgctcgccgacgaggtcgcggcggatcccggctcctcggcgcccggagtccaggcg
tcccatggcggggaagggcaggagcccggcggcggcgcccccggctctggggatgtgctg
ctcagctcggtcacctttagccagagcggggccaccatctctccgggcgctgccgcggcg
cctcccgcagtggccttggggccacctgggaaagttggagtctttgtggaagatcagcca
gatgtaagtgcagtactgtctgcctacaatcagcaaggagacccagcgctttatgaagag
tactatagtggactgaaacacttcattgaatgtgctctggactgtcatcgagctgagtta
tcgcagcttttttatcctctctttgtacatatgtacttggagctagtctacaatgggcat
gaaaatgaagcaaagtccttctttgaaaagtttcatggagatcaggagtgttattatcaa
gatgacttgcgtgtactatcaagtttaaccaaaaaagagcacatgagagggaatgagaca
atgctggattttcgaacaagcaagtttgtgctgcgaatttcccgcgattcttatcagcta
ttgaagagacaccttcaggaaaaacagaacaatcagatctggaatattgttcaggaacat
ctttacattgatatctttgatggaatgcctcgcagtaaacaacagattgatgctatggtg
ggaagtttggcaggagaggcaaaacgggaggctaataaagcaaaggtcttttttggctta
ttaaaagaaccagaaattgagttgcctttggatgatgaagatgaagagggggaaaatgag
gagggcaagccaaagaagaagaagccaaaaaaagacagcatgggatcaaaaagtaaaaag
caagatccaaatgctcctccacagactagaatcccacttcctgagctaaaggattcagat
aagttggacaaaataatgaatatgaaagaagccactaaacgtgtacgtcttggtccagac
tgcctgccttccatttgtttctacacattccttaatgcataccagggccttacagcagtg
gacattacagatgactctagcatgatcgttggaggctttgctgactccactgtcagagtg
tggtctgtgacacccaaaaagctacgcagtgtgaaatcagcagcagatctcagtctcata
gataaagaatcagatgatgttttagaaaggatcatggatgagagaacagcaagtgagttg
aagattttatatggtcacagtggacctgtctatggtaccagcttcagtcctgataggaac
tacttgctatcatcttcagaggatggcactatcagactgtggagccttttaaccttttct
tgtctagtcggatacaaaggacacaactaccctatatgggatacacagttctctccctat
ggatattactttatatctggaggtcatgacagagtggctcgcttatgggcaacggatcac
taccagcctttgcgaatctttgctggccatcttgctgatgtcacatcgacgcgttttcac
ccaaactccaactacgttgctacaggctcagcagataggactgtgcggctgtgggatgtc
ctgaatgggaattgtgtcagaattttcacaggacataagggaccagttcattcattggca
ttttctcctaacggaagattcttggcaactggagcaacagatggaagagtgcttttgtgg
gatattgggcatggtttgatggttggagaattaaaaggacacacagacacaatctacaca
ctcagattcagtagagatggagagatcttagcatcaggttcaatggataacacggtaaag
ctatgggatgctgtgaaagcctttgaggacttagaaacagatgattttaccacagccact
ggacatataaacctgcctgaaagctctcaagacttgctgttgggtacatacatgtccaaa
tcaactcctgtcacacatcttcattttacccgcagaaatttgcttcttgctgctggggca
tacagtcctcagtga
DBGET
integrated database retrieval system
