Podarcis raffonei (Aeolian wall lizard): 128414348
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Entry
128414348 CDS
T09310
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128414348 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128414348 (EXOSC1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128414348 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128414348 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
128414348
NCBI-ProteinID:
XP_053245475
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All DBs
Position
5:complement(59793628..59799396)
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AA seq
194 aa
AA seq
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MAPARYCVPGERLCSLEEGTPGSGTYTRHGSIYASLAGCLMKKSENGMLPVVSVMRDVES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDVRATEKDKVEVYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHSKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcgcggtactgcgtccctggagagagactctgcagcttagaggaaggaacc
cctggaagcggcacctacacccgtcatggttcgatctatgcctccctggctggttgtctc
atgaagaaaagtgagaatggcatgctcccggtggtttctgtgatgagggacgtggaatct
cagcttcttcctgatgtgggagctacagtgacgtgcaaggtttgcagcattaactctcgt
tttgccaaggtgcacatcttgtatgtcggctctacaccattaaagtccccattccgtgga
actatccggagagaagatgtcagagctacagagaaagacaaggtagaggtttacaagagt
ttccgcccaggagatattgttttggccaaagttatctctctgggtgatgcacagtccaac
tatttgctgacaacagcggaaaatgagctgggggtagtggtggctcatagtgaagcagga
gtacagatggtgccaatcagctggtgtgaaatgcagtgccccagtacacatagcaaggaa
ctgcgcaaggtagccagagtacagccccagtttctgcagacgtag
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