KEGG   Podarcis raffonei (Aeolian wall lizard): 128414401
Entry
128414401         CDS       T09310                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128414401 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:praf03019]
    128414401 (WDR33)
Messenger RNA biogenesis [BR:praf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     128414401 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 128414401
NCBI-ProteinID: XP_053245588
LinkDB
Position
5:61873402..61916469
AA seq 1304 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDGGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGFFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDETSEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPSPAEPLNDRKEDLKLEEKKKSQAE
IEQEMAALQYTNPQLLEQLKIERLAQKQAEQGQQQPPPGGPVHGPQHFPGQSPMSQVPQG
FQQAHPPQQMPMNMPQMGPPGPQGQFRPPGPPGQMGPQGPPLHQGGGGPQGFVGPQGPPQ
GLPRPQELHGHQGMQRHPGPHGQMGPPPGGPPGPQTNSGPQGHLGPPGPQAHLGQQGPPT
PQTHLGPQGPPGGQGPPGPRGMQGPHGVQGAQGIQGPVSQGPLMGLNPRGMQGPPGPREN
QGPGPQGMMMGHPPQEMRGPHGLLGHGPQEMRGPPPQGSMMGPPQELRGPPGAQGQQGPP
QGAMVGPQGNMQGPPGPQGQQNPSRGPHPSQGPPPFQQQKTPLLGDGPRAPFNQEGQNPG
PPPLIPGLGQHGGPGRHGPHNQGPGPNKGDSRGPPNHHMGPLSERRHDQNSGGPDHGPER
GPFRGGQDWGDGRENRGMPDRRGPHPEFHDDFDRPDEFREDFHPDKRFGHRLREFEGRGG
PPQEEKWRRGGPGPPFPPDHREFNEGDSRGPNRGPPGPWEGRRPSDERFPHEPEDARYRG
RRDESYRRGTPSRHEGRGSRGRDSFSGPDDFVPEEKFDSSEDNARGRDHGGRGRGRGAAR
GGRKGLLPTPDEFPHFEGGRMDGNREPGPRQDHPPHDGHSPASRERSSSIQGMDMASLPP
RKRPWHDGPGTSDHREMEIQGGPPEERGKGRGKSGPSQRMSKSGRSSSLDGEHHDGYHRE
EPFGGPPGGNNPSRGRSGSNWGRGSNMNSNQSRRGGSRGGGRGR
NT seq 3915 nt   +upstreamnt  +downstreamnt
atggctacagagattggatcaccgccgcggtttttccatatgccaaggtttcaacaccag
gcccctcgacaactgttctataaaagacctgattttgctcagcaacaggcaatgcagcag
ctcacttttgatggaaagcgtatgagaaaagctgtgaaccgaaaaactatagactataat
ccttctgtaatcaaatatttggagaacagagtatggcaaagagaccaacgggatatgcgg
gcaattcagcctgatggagggtattataatgatctggtccctcctataggaatgttgaac
aatcctatgaatgctgtaacaacaaaatttgttaggacatctaccaataaagtaaaatgt
ccagtatttgttgttaggtggactccagaagggaggcgcttagttactggggcttctagt
ggagagttcaccttatggaatggacttactttcaactttgaaacaatattacaggctcat
gacagtccagtgagggctatgacttggtcacataatgacatgtggatgttgacagcagac
catgggggatatgtgaaatattggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggtgctgatgtcaagtgtgttgactggcatccgacaaaaggtttggtggtt
tctggaagcaaagatagtcagcagccaatcaagttctgggatccaaagactggccagagc
cttgctacacttcatgctcataagaacactgtgatggaagtcaaattgaacctaaatggc
aactggctacttacagcatctcgcgatcacctctgcaaactctttgatattcgaaatctg
aaagaagagcttcaggtcttcagaggtcataagaaggaggcaacagctgtggcctggcat
cctgttcatgaagggttctttgccagtggagggtccgatggctcattactgttctggcat
gttggggtggagaaggaagtgggaggtatggaaatggcccatgaaggaatgatttggagt
ttagcttggcatcctctaggacacattctgtgctcaggatcaaatgatcacaccagcaaa
ttctggacccggaatcgtcctggagataaaatgcgagatcgttataatctgaacttgctt
ccaggaatgtcagaggatggagttgaatatgatgacctagaacccaatagtcttgcagtg
attccagggatgggaatacctgagcagctgaaactagccatggaacaagagcagatgggg
aaagatgagaccagtgaaattgagatgactatcccaggattggactggggaatggaggag
gtgatgcaaaaggaccaaaagaaagtaccgcaaaaaaaggtcccctacgcaaaaccaatc
ccagcccagtttcagcaggcttggatgcagaataaagttcctattccttcaccagctgag
ccactgaatgaccgaaaggaagatcttaaactggaggaaaagaagaagtcacaggcagag
attgagcaagaaatggcagcacttcagtacaccaacccacagcttctagagcaactgaag
attgaaaggcttgcacagaagcaagcagaacaaggtcagcagcagccacctccaggagga
cctgttcatggaccccaacatttcccaggacaaagtccaatgtctcaggtgcctcaaggc
tttcagcaagcccatccacctcagcagatgccaatgaatatgcctcagatgggaccacct
gggccacagggacagttcaggcctccaggacctccaggacaaatgggaccccaaggtcct
cctttacaccaaggaggtggtggaccacaaggatttgttgggcctcaaggacctccacaa
ggactgccaagacctcaagaacttcatgggcatcaaggaatgcagagacatcctggccct
catggacaaatgggccctccacctggggggccacctggtccacagacgaattctggacct
cagggtcacttaggcccaccaggcccacaggctcatttaggtcaacaaggtccaccaaca
ccacagacccacttaggtcctcaagggccacctggtggtcaagggccacctgggccaaga
ggaatgcaaggacctcatggagtgcaaggagctcaagggatacagggtcctgtatctcaa
gggcccttgatgggacttaacccaagaggcatgcagggacctccaggaccaagggagaac
cagggtcctggaccacaggggatgatgatgggccatccacctcaagaaatgagagggccg
catggtttactggggcatggtccccaggagatgaggggtcctccacctcagggttcaatg
atgggacctccacaagaattgcgtgggccaccaggtgcacaaggacagcagggacctcca
caaggtgctatggtagggcctcaaggaaacatgcaagggccaccagggcctcaaggacag
cagaacccttcaagggggccacatccttcccagggccctccaccctttcagcagcagaaa
actcccttgcttggtgacggtcctcgggccccattcaatcaggaaggacagaatccaggt
cctccaccattgataccaggactgggacagcatggaggcccaggccgccatggccctcac
aaccaaggacctggtcctaataaaggtgattctcgtgggccgccaaaccatcacatgggc
cctctctcagaaaggcggcatgaccagaacagtggtggtcctgatcatggccctgagagg
ggccccttccgaggtggccaagattggggtgatggtagagaaaataggggcatgccagac
agaagaggacctcatccagagttccatgatgactttgatcgaccagatgaatttcgtgaa
gacttccatccagacaagcgatttggccatcgcttacgtgaatttgagggacggggaggc
ccaccccaagaagagaagtggagacgaggtggtccaggcccacctttcccccctgaccac
agagaattcaatgagggagatagcagaggtccaaaccgtggacctcctgggccttgggag
ggacggagaccttcagacgagagatttcctcatgagcctgaggatgcacggtaccgagga
agaagagatgaaagctataggagaggaacaccctcaagacatgagggccggggatccagg
ggaagggacagcttttctgggcctgacgactttgtgccagaagaaaagtttgactcctca
gaggataacgcaagaggaagagatcatggtggccgggggcgaggtcggggtgctgctaga
gggggacggaaaggtctgcttccaacgccagatgaatttcctcactttgaaggaggccgt
atggatggaaatcgagaaccaggtccccgccaggatcatccacctcatgatggtcattct
ccagcaagtcgagaacgttcttcctcaatccagggaatggacatggcatcactgccacct
cgcaagcgtccttggcatgatggaccaggaacctctgaccatagagaaatggaaattcaa
ggcgggcctccagaagagaggggaaaggggcgtgggaagtcaggaccttcacagagaatg
tcaaaatctgggagatccagctctttggatggagaacaccatgatggatatcatagagaa
gaaccctttggaggacctccaggaggcaataacccttcccgagggaggagtgggagtaat
tggggaagaggaagtaacatgaactcaaaccagtcaaggcgaggaggttctcgaggtggc
ggaaggggtcgatag

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