Podarcis raffonei (Aeolian wall lizard): 128414419
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Entry
128414419 CDS
T09310
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128414419 (WDHD1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
128414419 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
WD40
HMG_WDHD1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
HMG_box
ANAPC4_WD40
eIF2A
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Ge1_WD40
NBCH_WD40
HMG_box_2
Beta-prop_SCAP
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
128414419
NCBI-ProteinID:
XP_053245678
LinkDB
All DBs
Position
1:complement(5790702..5825626)
Genome browser
AA seq
1130 aa
AA seq
DB search
MPLSQKPMRYGHTEGHTDVCFDDIGSCIVTCGSDGDVRIWESLDDNDPKSINVGEKAYSF
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMNANHVVFSADGSKVAAGSSDFLVKI
VEVTDSSQQKTFRGHDAPVLSVSFDPKNTFLASASCDGSVRVWKISEQSCETNWPLLQKC
NDVVNAKTICRHAWQPKTGKLLAVPVEKVVKLYRRETWDHQLDLLDKSVTQPFNVVAWSP
CGQYLAAGSVGGWIVIWNVDTQECLERVKHDKSYTICGLAWHPKGGQVAYTDMEGNLGLL
ENVCDVDGKKSNHKASVPGVKDYDELFDEDDGEDFLNRDSVGDDWGPKAARNDEDDDDDP
MMASGRPRNRGAIIEDDENSLDTGLLKANSALDKEEEEDDQESLAPLPPLSSTQRPFYDG
PVPTPQQKPFQPGSTPVHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTAIHHAMHLPN
SLNHTMAALSSEAILLACESTEELASKLHCIHFNSWDSNKEWTVDMLQNEEIEAVCLGQG
WAACATSTLLLRLFTNGGVQKDIFSLPGPVVSMAGHGEQLLVAFHKGTGFEGDQCLGVQL
LELGRKKRQLLHGDPLPLSRKSYLTWLGFSAEGTPCYADSEGVVRMLNRGLGNTWTPVCD
TREHCKGKSDHYWIVGIHENPQQLRCIPCKGARFPATLPRPAVAVLPFKLPFCQTATDKG
QMEEQFWRSVLFHRYLDYLSQNGYEHDESLKSQATQEQQNLLMKMFALSCTLEREFRCME
LAELMTQNARSLAIKYASRSRRLNLAQRLSELAAERAAELAAAEEHVMQEEEEEEEDFRN
HLNAGYSSTPTESGQARIRNLQRQQSMETYEEEEEKEEEEGTSEVTKPRPLPISEKASTP
KSVTKAAVVSSSQKRVNPFKVSSSQKDQLVQLANIIDNMTKQGKKNSMPNSRAAPNKKSP
VIKPLVPKPKSKQAAAAAFFQPRTPSTEKKNIGERGGGTEAPPPEPPQTPTESSDNKRPK
TGFQMWLDENRSCIGADNPHFEETEIIKEGMSRFRNLSAEERMVWTEKAKGKEADDSSEG
KKRKRLEVVNSDGQESQGKKSKEDTSSVTKPSSIQESAIAKLSAFAFKQR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtcacaaaagccaatgagatacggccacacagaaggtcacacagatgtttgc
tttgatgacattgggagctgtattgtaacatgtggcagtgatggagatgtcaggatttgg
gaaagcctggatgacaatgaccccaagtcaattaacgtgggagaaaaggcctactcgttt
gctctcaagaatggaagattgattacggcagtctctaacaatactgtccagatccataca
ttcccagagggtgccccggatggtatcctgacacgcttcacaatgaatgcaaaccatgta
gttttcagtgctgatgggagcaaagtagctgctggatccagtgacttcctggtgaagatt
gtggaagtaactgacagcagccagcaaaagacatttcggggacatgacgcacctgtttta
agtgtgtcgttcgatccaaagaacacttttctggcatcggcaagctgtgacgggtcggtc
agagtgtggaaaatttcagagcagagttgtgagacaaactggccattgctgcagaagtgt
aatgatgtggtgaatgcaaaaacaatatgtagacacgcatggcaacccaaaacaggaaag
ttgcttgctgttccagtagagaaagtggttaaactatacagacgagaaacctgggatcat
caactagatctgttggataagtccgtcacccagcccttcaatgttgtagcctggtctccg
tgtggacagtatctggcagcaggaagtgttggtggctggatagtcatttggaatgtggac
acccaggagtgcttggagagggtgaagcatgacaaaagttacaccatctgtggtctggct
tggcacccaaaaggcgggcaggttgcttatacggacatggaaggcaatctgggactactt
gagaacgtctgtgatgtagatggaaagaaatcaaaccacaaggcatctgttcctggtgtc
aaagattacgacgaactttttgatgaggatgacggcgaagacttcctgaacagagactca
gttggggacgactggggtcccaaagctgcgaggaacgatgaagatgacgacgacgacccc
atgatggcatcgggccgtcccagaaaccgaggggcaataatagaggatgatgagaactcc
ctagatactggattgctgaaagctaactctgcccttgataaggaggaagaagaggacgac
caggaaagccttgccccgctgccgccactatcatcaacccagaggcctttctacgatggg
ccagtgccaactcctcagcaaaagcccttccagcctggctccactccggttcatctcact
catcgcttcatggtgtggaactctattggtattattcgctgctataatgatgagcaggac
aacgccattgatgtggaattccatgacacggccatccatcacgctatgcacttgccaaat
tctttgaatcacacaatggcagccctttccagtgaagctattttgctagcctgcgagagc
acagaggagctagcgagcaagcttcactgcatacattttaactcctgggattccaacaag
gagtggacagttgacatgttgcagaatgaagagattgaagcggtttgtttgggccagggc
tgggctgcgtgtgccacaagcacccttctcctccgcctcttcacgaacgggggagttcag
aaagacatcttcagcctccctggccctgtggtgtccatggcgggacacggagagcagctg
ttggtggcttttcacaaaggtactggctttgaaggggatcagtgtcttggggtgcagctg
ctagagctgggaaggaagaagaggcagcttttgcacggtgacccacttcctctttccagg
aaatcctatctcacatggctaggattctcagcagaaggtaccccttgttacgcggattca
gagggcgtcgtgcgcatgctgaaccgaggacttggtaatacctggaccccagtctgtgac
acaagggagcactgtaaagggaagtcagatcactactggattgtgggcattcatgaaaac
ccacagcagctcaggtgcatcccttgtaaaggagcccgtttccccgctacccttccccgt
cctgcagtagcagtgctgccattcaagcttcctttttgtcagacagcaacagataagggc
cagatggaggagcaattttggcgctctgtcttgtttcaccgctacctggactacttatcc
caaaatggatatgaacacgatgaaagtttgaaaagccaggcaacccaagaacagcagaat
ctcttgatgaaaatgtttgcactttcctgcaccctggaacgtgagtttcgctgcatggaa
cttgcagagcttatgactcagaatgccaggagcttagctatcaagtacgcctctcgctct
cggaggctgaatctcgcccaacggctcagtgaactggcagcagagagagcagctgagttg
gcagctgctgaagagcacgtcatgcaagaggaagaggaggaggaagaggatttccgaaat
catctgaatgctggttacagtagcacccccacagaatcaggtcaggcccggatcagaaac
cttcaacgtcagcaaagtatggagacctacgaggaagaggaggagaaggaggaggaggaa
ggcacatctgaagtgacaaaacctagacctctgccaatctctgaaaaggcgtctactccc
aaatctgtaacaaaagctgcagttgtgtccagcagtcaaaagcgagtcaatcccttcaag
gtatccagtagtcaaaaggatcaattggttcagctggctaatatcatagacaacatgacc
aaacagggcaagaaaaattccatgccaaacagccgagctgctccaaacaagaagagtcca
gttataaaaccgctggttcctaagccgaagtcaaagcaggctgcagcagctgcatttttc
cagccccggacacctagtactgaaaagaagaacataggcgagagaggagggggaactgaa
gcacccccacctgaaccacctcaaactccaactgagagcagtgacaataaaaggccaaag
actgggttccagatgtggctagacgagaacagaagctgcattggggcagataatcctcat
tttgaagaaacagagataataaaagaaggcatgagtcgattcagaaatctgtctgctgaa
gaaaggatggtctggactgagaaagccaaaggaaaagaagctgacgattcgtcggaaggg
aaaaagcggaagcgcttggaagtggttaacagtgatgggcaagaaagccaagggaaaaaa
tcaaaggaggacacaagctcggtcacaaaacccagttccattcaggagtctgccattgca
aagctatcagcatttgccttcaagcagagataa
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